EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000017979 (Gene tree)
Gene ID
298586
Gene Symbol
Mrto4
Alias
LOC298586|RGD1311709
Full Name
MRT4 homolog%2C ribosome maturation factor
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
5529 bases
Position
chr5:157815361-157820889
Accession
1311709
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000024326Ribosomal_L10PF00466.207.9e-1211
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000024326-1355XM_006239178ENSRNOP00000024326193 (aa)XP_006239240F1LTU4
Gene Model
Click here to download ENSRNOG00000017979's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017979's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000017979Mrto49195.455ENSG00000053372MRTO47495.455Homo_sapiens
ENSRNOG00000017979Mrto47975.163ENSAPOG00000013290-7875.163Acanthochromis_polyacanthus
ENSRNOG00000017979Mrto47975.163ENSAPOG00000013189-7875.163Acanthochromis_polyacanthus
ENSRNOG00000017979Mrto48876.923ENSAPOG00000011387mrto47176.923Acanthochromis_polyacanthus
ENSRNOG00000017979Mrto48362.112ENSAMEG00000014981-7362.112Ailuropoda_melanoleuca
ENSRNOG00000017979Mrto49993.717ENSAMEG00000003014MRTO47496.023Ailuropoda_melanoleuca
ENSRNOG00000017979Mrto48875.740ENSACIG00000008213mrto47075.740Amphilophus_citrinellus
ENSRNOG00000017979Mrto48876.923ENSAOCG00000006483mrto46776.923Amphiprion_ocellaris
ENSRNOG00000017979Mrto49970.833ENSAPEG00000004866mrto47276.923Amphiprion_percula
ENSRNOG00000017979Mrto48875.740ENSATEG00000024976mrto47075.740Anabas_testudineus
ENSRNOG00000017979Mrto48979.191ENSAPLG00000013861MRTO48883.226Anas_platyrhynchos
ENSRNOG00000017979Mrto49194.886ENSANAG00000029674MRTO47494.886Aotus_nancymaae
ENSRNOG00000017979Mrto48875.148ENSACLG00000016523mrto47175.148Astatotilapia_calliptera
ENSRNOG00000017979Mrto49074.713ENSAMXG00000003899mrto47374.713Astyanax_mexicanus
ENSRNOG00000017979Mrto49196.023ENSBTAG00000011951MRTO47496.023Bos_taurus
ENSRNOG00000017979Mrto49992.188ENSCJAG00000006812MRTO48195.455Callithrix_jacchus
ENSRNOG00000017979Mrto49194.318ENSCAFG00000015189-9194.318Canis_familiaris
ENSRNOG00000017979Mrto49182.386ENSCAFG00000000532-7382.386Canis_familiaris
ENSRNOG00000017979Mrto48466.871ENSCAFG00000009080-7666.871Canis_familiaris
ENSRNOG00000017979Mrto49194.318ENSCAFG00020008173MRTO47394.318Canis_lupus_dingo
ENSRNOG00000017979Mrto48561.212ENSCHIG00000010639-6961.212Capra_hircus
ENSRNOG00000017979Mrto49196.023ENSCHIG00000014751MRTO47496.023Capra_hircus
ENSRNOG00000017979Mrto49196.023ENSTSYG00000013413MRTO47496.023Carlito_syrichta
ENSRNOG00000017979Mrto49196.045ENSCAPG00000012648MRTO47896.045Cavia_aperea
ENSRNOG00000017979Mrto49196.045ENSCPOG00000033237MRTO47396.045Cavia_porcellus
ENSRNOG00000017979Mrto49194.886ENSCCAG00000036206MRTO47494.886Cebus_capucinus
ENSRNOG00000017979Mrto49974.346ENSCATG00000030492-7176.571Cercocebus_atys
ENSRNOG00000017979Mrto49396.133ENSCLAG00000001997MRTO47396.045Chinchilla_lanigera
ENSRNOG00000017979Mrto49193.750ENSCSAG00000018596-7493.750Chlorocebus_sabaeus
ENSRNOG00000017979Mrto49193.182ENSCSAG00000000876-7493.182Chlorocebus_sabaeus
ENSRNOG00000017979Mrto48986.550ENSCPBG00000023562MRTO47186.550Chrysemys_picta_bellii
ENSRNOG00000017979Mrto48961.047ENSCSAVG00000011770-6161.047Ciona_savignyi
ENSRNOG00000017979Mrto49193.750ENSCANG00000002395-7493.750Colobus_angolensis_palliatus
ENSRNOG00000017979Mrto49185.795ENSCANG00000005353-7285.795Colobus_angolensis_palliatus
ENSRNOG00000017979Mrto49984.021ENSCGRG00001001286-7285.393Cricetulus_griseus_chok1gshd
ENSRNOG00000017979Mrto49998.429ENSCGRG00001005758-8098.429Cricetulus_griseus_chok1gshd
ENSRNOG00000017979Mrto49996.335ENSCGRG00000010649-8096.335Cricetulus_griseus_crigri
ENSRNOG00000017979Mrto49984.021ENSCGRG00000001527-7285.393Cricetulus_griseus_crigri
ENSRNOG00000017979Mrto48974.269ENSCSEG00000021629mrto47274.269Cynoglossus_semilaevis
ENSRNOG00000017979Mrto48973.684ENSCVAG00000012249mrto47273.684Cyprinodon_variegatus
ENSRNOG00000017979Mrto49073.410ENSDARG00000007130mrto47173.410Danio_rerio
ENSRNOG00000017979Mrto48883.432ENSDNOG00000030871-7183.432Dasypus_novemcinctus
ENSRNOG00000017979Mrto49193.750ENSDNOG00000010119-7493.750Dasypus_novemcinctus
ENSRNOG00000017979Mrto49970.103ENSDNOG00000045395-7471.910Dasypus_novemcinctus
ENSRNOG00000017979Mrto49192.571ENSDORG00000025382Mrto47492.614Dipodomys_ordii
ENSRNOG00000017979Mrto49990.674ENSETEG00000001675MRTO47393.220Echinops_telfairi
ENSRNOG00000017979Mrto49194.318ENSEASG00005014967MRTO47494.318Equus_asinus_asinus
ENSRNOG00000017979Mrto49194.318ENSECAG00000012598MRTO47494.318Equus_caballus
ENSRNOG00000017979Mrto48291.250ENSEEUG00000013520MRTO47091.250Erinaceus_europaeus
ENSRNOG00000017979Mrto48972.515ENSELUG00000011152mrto47371.264Esox_lucius
ENSRNOG00000017979Mrto49992.670ENSFCAG00000008771MRTO47494.318Felis_catus
ENSRNOG00000017979Mrto48981.287ENSFALG00000010619MRTO47380.460Ficedula_albicollis
ENSRNOG00000017979Mrto49396.685ENSFDAG00000013300MRTO47396.610Fukomys_damarensis
ENSRNOG00000017979Mrto48973.099ENSFHEG00000022920mrto47373.099Fundulus_heteroclitus
ENSRNOG00000017979Mrto48674.096ENSGMOG00000001422mrto47373.373Gadus_morhua
ENSRNOG00000017979Mrto48984.211ENSGALG00000003991MRTO47483.333Gallus_gallus
ENSRNOG00000017979Mrto48972.515ENSGAFG00000012570mrto47272.515Gambusia_affinis
ENSRNOG00000017979Mrto48974.854ENSGACG00000001672mrto47274.854Gasterosteus_aculeatus
ENSRNOG00000017979Mrto48986.550ENSGAGG00000012997MRTO47286.550Gopherus_agassizii
ENSRNOG00000017979Mrto49992.188ENSGGOG00000000533MRTO47494.886Gorilla_gorilla
ENSRNOG00000017979Mrto48874.556ENSGGOG00000042625-7374.405Gorilla_gorilla
ENSRNOG00000017979Mrto49371.111ENSGGOG00000036991-7370.690Gorilla_gorilla
ENSRNOG00000017979Mrto48873.964ENSHBUG00000009670mrto47173.964Haplochromis_burtoni
ENSRNOG00000017979Mrto49396.685ENSHGLG00000012157MRTO47496.610Heterocephalus_glaber_female
ENSRNOG00000017979Mrto49396.685ENSHGLG00100014484MRTO47496.610Heterocephalus_glaber_male
ENSRNOG00000017979Mrto49967.016ENSHCOG00000019894mrto47370.690Hippocampus_comes
ENSRNOG00000017979Mrto48876.923ENSIPUG00000002957mrto47076.923Ictalurus_punctatus
ENSRNOG00000017979Mrto49197.159ENSSTOG00000028112MRTO47497.159Ictidomys_tridecemlineatus
ENSRNOG00000017979Mrto49196.000ENSJJAG00000017998Mrto47396.023Jaculus_jaculus
ENSRNOG00000017979Mrto48972.515ENSKMAG00000010148mrto47272.515Kryptolebias_marmoratus
ENSRNOG00000017979Mrto48774.405ENSLBEG00000025010mrto47174.405Labrus_bergylta
ENSRNOG00000017979Mrto49078.736ENSLACG00000019155MRTO47378.736Latimeria_chalumnae
ENSRNOG00000017979Mrto48877.059ENSLOCG00000004468mrto46977.059Lepisosteus_oculatus
ENSRNOG00000017979Mrto49193.750ENSLAFG00000010416MRTO48294.220Loxodonta_africana
ENSRNOG00000017979Mrto49193.750ENSMFAG00000033225-7493.750Macaca_fascicularis
ENSRNOG00000017979Mrto49193.750ENSMMUG00000038335MRTO47493.750Macaca_mulatta
ENSRNOG00000017979Mrto49268.362ENSMMUG00000044851-6968.182Macaca_mulatta
ENSRNOG00000017979Mrto49193.750ENSMNEG00000032783-7493.750Macaca_nemestrina
ENSRNOG00000017979Mrto49194.318ENSMLEG00000023273-7494.318Mandrillus_leucophaeus
ENSRNOG00000017979Mrto48875.148ENSMAMG00000014839mrto47175.148Mastacembelus_armatus
ENSRNOG00000017979Mrto48875.148ENSMZEG00005013929mrto47175.148Maylandia_zebra
ENSRNOG00000017979Mrto48983.626ENSMGAG00000005361MRTO47382.759Meleagris_gallopavo
ENSRNOG00000017979Mrto49998.429ENSMAUG00000019627-8098.429Mesocricetus_auratus
ENSRNOG00000017979Mrto48282.278ENSMICG00000033640-7682.278Microcebus_murinus
ENSRNOG00000017979Mrto49194.886ENSMICG00000004019MRTO47394.886Microcebus_murinus
ENSRNOG00000017979Mrto49197.159ENSMOCG00000018413Mrto49297.159Microtus_ochrogaster
ENSRNOG00000017979Mrto410067.876ENSMMOG00000010735mrto47374.269Mola_mola
ENSRNOG00000017979Mrto49086.207ENSMODG00000015874MRTO47286.207Monodelphis_domestica
ENSRNOG00000017979Mrto48974.269ENSMALG00000007769mrto47774.269Monopterus_albus
ENSRNOG00000017979Mrto49998.429MGP_CAROLIEiJ_G0026711Mrto48098.429Mus_caroli
ENSRNOG00000017979Mrto49998.429ENSMUSG00000028741Mrto4100100.000Mus_musculus
ENSRNOG00000017979Mrto410097.927MGP_PahariEiJ_G0029042Mrto48097.927Mus_pahari
ENSRNOG00000017979Mrto49998.429MGP_SPRETEiJ_G0027691Mrto48098.429Mus_spretus
ENSRNOG00000017979Mrto49991.099ENSMPUG00000016181MRTO47493.182Mustela_putorius_furo
ENSRNOG00000017979Mrto49195.455ENSMLUG00000001566-7495.455Myotis_lucifugus
ENSRNOG00000017979Mrto49193.182ENSMLUG00000025001-7493.182Myotis_lucifugus
ENSRNOG00000017979Mrto49994.764ENSNGAG00000011660Mrto47496.591Nannospalax_galili
ENSRNOG00000017979Mrto48875.148ENSNBRG00000021435mrto47175.148Neolamprologus_brichardi
ENSRNOG00000017979Mrto48391.250ENSNLEG00000034965-8691.250Nomascus_leucogenys
ENSRNOG00000017979Mrto49180.682ENSNLEG00000027896-7380.682Nomascus_leucogenys
ENSRNOG00000017979Mrto49881.579ENSNLEG00000018006-7384.659Nomascus_leucogenys
ENSRNOG00000017979Mrto46190.598ENSMEUG00000000027MRTO47190.598Notamacropus_eugenii
ENSRNOG00000017979Mrto49194.286ENSOPRG00000012746MRTO47494.318Ochotona_princeps
ENSRNOG00000017979Mrto49187.571ENSODEG00000014387-7387.571Octodon_degus
ENSRNOG00000017979Mrto49193.785ENSODEG00000015379-7393.785Octodon_degus
ENSRNOG00000017979Mrto49186.441ENSODEG00000011537-7286.441Octodon_degus
ENSRNOG00000017979Mrto49192.655ENSODEG00000019157-7392.655Octodon_degus
ENSRNOG00000017979Mrto49476.923ENSODEG00000014016-6377.401Octodon_degus
ENSRNOG00000017979Mrto48875.740ENSONIG00000014318mrto47175.740Oreochromis_niloticus
ENSRNOG00000017979Mrto49974.869ENSOANG00000015345MRTO47378.736Ornithorhynchus_anatinus
ENSRNOG00000017979Mrto49991.146ENSOCUG00000000274MRTO47494.318Oryctolagus_cuniculus
ENSRNOG00000017979Mrto48976.023ENSORLG00000027922mrto47176.923Oryzias_latipes
ENSRNOG00000017979Mrto48976.023ENSORLG00020019412mrto47176.923Oryzias_latipes_hni
ENSRNOG00000017979Mrto48976.023ENSORLG00015015309mrto47176.923Oryzias_latipes_hsok
ENSRNOG00000017979Mrto48975.439ENSOMEG00000021110mrto47276.331Oryzias_melastigma
ENSRNOG00000017979Mrto49196.023ENSOGAG00000010713-7496.023Otolemur_garnettii
ENSRNOG00000017979Mrto49959.585ENSOGAG00000027996-6963.314Otolemur_garnettii
ENSRNOG00000017979Mrto49195.455ENSPPAG00000043731MRTO47495.455Pan_paniscus
ENSRNOG00000017979Mrto49370.000ENSPPAG00000039572-7570.115Pan_paniscus
ENSRNOG00000017979Mrto49991.623ENSPPRG00000024765MRTO47493.182Panthera_pardus
ENSRNOG00000017979Mrto49993.717ENSPTIG00000016208MRTO47495.455Panthera_tigris_altaica
ENSRNOG00000017979Mrto49195.455ENSPTRG00000000262MRTO47495.455Pan_troglodytes
ENSRNOG00000017979Mrto49370.556ENSPTRG00000046027-7570.115Pan_troglodytes
ENSRNOG00000017979Mrto49179.545ENSPANG00000017838-7279.545Papio_anubis
ENSRNOG00000017979Mrto49581.967ENSPANG00000011596-7684.571Papio_anubis
ENSRNOG00000017979Mrto49970.312ENSPKIG00000017917mrto47275.145Paramormyrops_kingsleyae
ENSRNOG00000017979Mrto49085.632ENSPSIG00000015125MRTO49085.632Pelodiscus_sinensis
ENSRNOG00000017979Mrto48867.251ENSPMGG00000013461mrto46867.251Periophthalmus_magnuspinnatus
ENSRNOG00000017979Mrto49391.803ENSPEMG00000023720-7491.620Peromyscus_maniculatus_bairdii
ENSRNOG00000017979Mrto49998.953ENSPEMG00000010459-8098.953Peromyscus_maniculatus_bairdii
ENSRNOG00000017979Mrto49980.628ENSPCIG00000003652MRTO47285.632Phascolarctos_cinereus
ENSRNOG00000017979Mrto48973.684ENSPFOG00000013266mrto47273.684Poecilia_formosa
ENSRNOG00000017979Mrto48973.684ENSPLAG00000016285mrto47273.684Poecilia_latipinna
ENSRNOG00000017979Mrto48973.684ENSPMEG00000003539mrto47273.684Poecilia_mexicana
ENSRNOG00000017979Mrto48972.515ENSPREG00000006249mrto47272.515Poecilia_reticulata
ENSRNOG00000017979Mrto49195.455ENSPPYG00000001795MRTO47495.455Pongo_abelii
ENSRNOG00000017979Mrto49193.182ENSPCAG00000001458MRTO47493.182Procavia_capensis
ENSRNOG00000017979Mrto49993.229ENSPCOG00000014182MRTO47496.023Propithecus_coquereli
ENSRNOG00000017979Mrto49393.333ENSPVAG00000005775MRTO47393.750Pteropus_vampyrus
ENSRNOG00000017979Mrto48874.556ENSPNYG00000018672mrto47174.556Pundamilia_nyererei
ENSRNOG00000017979Mrto48777.381ENSPNAG00000027733mrto47177.381Pygocentrus_nattereri
ENSRNOG00000017979Mrto49983.333ENSRBIG00000036159-8285.227Rhinopithecus_bieti
ENSRNOG00000017979Mrto49275.706ENSRBIG00000013434-7175.568Rhinopithecus_bieti
ENSRNOG00000017979Mrto49194.318ENSRBIG00000036806-7494.318Rhinopithecus_bieti
ENSRNOG00000017979Mrto49983.854ENSRROG00000037374-7285.795Rhinopithecus_roxellana
ENSRNOG00000017979Mrto49193.750ENSRROG00000011593-7093.750Rhinopithecus_roxellana
ENSRNOG00000017979Mrto49194.318ENSRROG00000042838-7494.318Rhinopithecus_roxellana
ENSRNOG00000017979Mrto49989.062ENSSBOG00000022924MRTO47493.182Saimiri_boliviensis_boliviensis
ENSRNOG00000017979Mrto49086.705ENSSHAG00000008423MRTO47387.719Sarcophilus_harrisii
ENSRNOG00000017979Mrto48976.744ENSSFOG00015006887mrto47276.744Scleropages_formosus
ENSRNOG00000017979Mrto48775.595ENSSMAG00000014393mrto47075.595Scophthalmus_maximus
ENSRNOG00000017979Mrto48775.595ENSSDUG00000015362mrto47175.595Seriola_dumerili
ENSRNOG00000017979Mrto48775.000ENSSLDG00000015813mrto47175.000Seriola_lalandi_dorsalis
ENSRNOG00000017979Mrto49990.674ENSSARG00000012700MRTO47492.135Sorex_araneus
ENSRNOG00000017979Mrto49975.916ENSSPUG00000001110MRTO47281.871Sphenodon_punctatus
ENSRNOG00000017979Mrto49870.526ENSSPAG00000007811mrto47176.331Stegastes_partitus
ENSRNOG00000017979Mrto49393.333ENSSSCG00000034814MRTO47393.182Sus_scrofa
ENSRNOG00000017979Mrto49081.609ENSTGUG00000016935MRTO49581.609Taeniopygia_guttata
ENSRNOG00000017979Mrto48874.556ENSTRUG00000019838mrto47174.556Takifugu_rubripes
ENSRNOG00000017979Mrto48874.556ENSTNIG00000014802mrto47174.556Tetraodon_nigroviridis
ENSRNOG00000017979Mrto49194.318ENSTTRG00000014203MRTO47494.318Tursiops_truncatus
ENSRNOG00000017979Mrto49993.194ENSUAMG00000026191MRTO47095.455Ursus_americanus
ENSRNOG00000017979Mrto49993.194ENSUMAG00000018964MRTO47496.023Ursus_maritimus
ENSRNOG00000017979Mrto49194.318ENSVVUG00000029432MRTO47394.318Vulpes_vulpes
ENSRNOG00000017979Mrto49076.879ENSXETG00000020828mrto47376.437Xenopus_tropicalis
ENSRNOG00000017979Mrto410068.912ENSXCOG00000013521mrto47373.684Xiphophorus_couchianus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000027ribosomal large subunit assembly-IEAProcess
GO:0000956nuclear-transcribed mRNA catabolic process21873635.IBAProcess
GO:0005730nucleolus21873635.IBAComponent
GO:0005737cytoplasm-IEAComponent
GO:0006364rRNA processing21873635.IBAProcess

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