EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018021 (Gene tree)
Gene ID: 294799
Gene Symbol: Brix1
Alias: Bxdc2|LOC294799|MGC116151|RGD1308508
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 11085 bases
Position: chr2:60450374-60461458
Accession: 1308508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000024285	Brix	PF04427.18	3.2e-39	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000024285	-	2638	-	ENSRNOP00000024285	352 (aa)	-	G3V8B4

Gene Model

Click here to download ENSRNOG00000018021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018021	Brix1	100	91.218	ENSG00000113460	BRIX1	100	91.501	Homo_sapiens
ENSRNOG00000018021	Brix1	92	74.691	ENSAPOG00000020334	bxdc2	98	73.235	Acanthochromis_polyacanthus
ENSRNOG00000018021	Brix1	100	91.218	ENSAMEG00000003295	BRIX1	100	91.501	Ailuropoda_melanoleuca
ENSRNOG00000018021	Brix1	91	74.143	ENSACIG00000017003	bxdc2	98	72.781	Amphilophus_citrinellus
ENSRNOG00000018021	Brix1	97	71.802	ENSAOCG00000000941	bxdc2	98	71.802	Amphiprion_ocellaris
ENSRNOG00000018021	Brix1	97	71.512	ENSAPEG00000017124	bxdc2	98	72.595	Amphiprion_percula
ENSRNOG00000018021	Brix1	97	71.053	ENSATEG00000016635	bxdc2	98	71.261	Anabas_testudineus
ENSRNOG00000018021	Brix1	84	73.311	ENSAPLG00000006647	BRIX1	99	73.311	Anas_platyrhynchos
ENSRNOG00000018021	Brix1	99	72.113	ENSACAG00000008586	BRIX1	99	72.113	Anolis_carolinensis
ENSRNOG00000018021	Brix1	100	88.430	ENSANAG00000022329	-	100	88.705	Aotus_nancymaae
ENSRNOG00000018021	Brix1	100	83.523	ENSANAG00000010505	-	100	83.523	Aotus_nancymaae
ENSRNOG00000018021	Brix1	97	72.353	ENSACLG00000005213	bxdc2	98	72.353	Astatotilapia_calliptera
ENSRNOG00000018021	Brix1	89	71.338	ENSAMXG00000043121	bxdc2	99	67.330	Astyanax_mexicanus
ENSRNOG00000018021	Brix1	100	92.918	ENSBTAG00000019211	BRIX1	100	92.918	Bos_taurus
ENSRNOG00000018021	Brix1	71	50.794	WBGene00019678	K12H4.3	80	46.316	Caenorhabditis_elegans
ENSRNOG00000018021	Brix1	100	88.385	ENSCJAG00000007390	-	100	88.669	Callithrix_jacchus
ENSRNOG00000018021	Brix1	100	90.368	ENSCJAG00000018506	-	100	90.652	Callithrix_jacchus
ENSRNOG00000018021	Brix1	100	87.819	ENSCAFG00000018797	BRIX1	100	87.819	Canis_familiaris
ENSRNOG00000018021	Brix1	100	82.436	ENSCAFG00020016783	BRIX1	100	82.436	Canis_lupus_dingo
ENSRNOG00000018021	Brix1	100	88.102	ENSCHIG00000015024	BRIX1	100	88.385	Capra_hircus
ENSRNOG00000018021	Brix1	100	91.193	ENSTSYG00000002898	BRIX1	100	91.193	Carlito_syrichta
ENSRNOG00000018021	Brix1	85	75.000	ENSCAPG00000009776	BRIX1	100	75.000	Cavia_aperea
ENSRNOG00000018021	Brix1	94	89.157	ENSCPOG00000022064	BRIX1	100	86.969	Cavia_porcellus
ENSRNOG00000018021	Brix1	100	90.652	ENSCCAG00000033405	BRIX1	100	90.935	Cebus_capucinus
ENSRNOG00000018021	Brix1	99	92.000	ENSCATG00000037721	BRIX1	99	92.000	Cercocebus_atys
ENSRNOG00000018021	Brix1	99	89.174	ENSCLAG00000008124	BRIX1	99	89.459	Chinchilla_lanigera
ENSRNOG00000018021	Brix1	100	90.935	ENSCSAG00000017117	BRIX1	100	91.501	Chlorocebus_sabaeus
ENSRNOG00000018021	Brix1	99	75.000	ENSCHOG00000012227	-	100	75.000	Choloepus_hoffmanni
ENSRNOG00000018021	Brix1	100	91.218	ENSCHOG00000001790	-	100	91.218	Choloepus_hoffmanni
ENSRNOG00000018021	Brix1	99	75.000	ENSCPBG00000021309	BRIX1	99	76.149	Chrysemys_picta_bellii
ENSRNOG00000018021	Brix1	74	56.371	ENSCING00000001695	-	97	56.371	Ciona_intestinalis
ENSRNOG00000018021	Brix1	74	56.705	ENSCSAVG00000008644	-	85	56.705	Ciona_savignyi
ENSRNOG00000018021	Brix1	99	92.286	ENSCANG00000022969	BRIX1	98	92.286	Colobus_angolensis_palliatus
ENSRNOG00000018021	Brix1	100	93.768	ENSCGRG00001007932	Brix1	100	93.768	Cricetulus_griseus_chok1gshd
ENSRNOG00000018021	Brix1	100	93.768	ENSCGRG00000016743	Brix1	100	93.768	Cricetulus_griseus_crigri
ENSRNOG00000018021	Brix1	97	69.565	ENSCSEG00000019821	bxdc2	99	69.565	Cynoglossus_semilaevis
ENSRNOG00000018021	Brix1	97	70.000	ENSCVAG00000016942	bxdc2	98	70.000	Cyprinodon_variegatus
ENSRNOG00000018021	Brix1	76	75.000	ENSDARG00000098935	bxdc2	85	66.564	Danio_rerio
ENSRNOG00000018021	Brix1	100	90.652	ENSDNOG00000002878	BRIX1	100	90.652	Dasypus_novemcinctus
ENSRNOG00000018021	Brix1	100	89.802	ENSDORG00000009369	Brix1	100	89.802	Dipodomys_ordii
ENSRNOG00000018021	Brix1	66	61.441	FBgn0035524	CG11583	66	61.441	Drosophila_melanogaster
ENSRNOG00000018021	Brix1	99	84.241	ENSETEG00000017842	-	100	84.241	Echinops_telfairi
ENSRNOG00000018021	Brix1	100	83.853	ENSETEG00000017329	-	100	83.853	Echinops_telfairi
ENSRNOG00000018021	Brix1	82	66.897	ENSEBUG00000007717	BRIX1	89	65.878	Eptatretus_burgeri
ENSRNOG00000018021	Brix1	100	91.501	ENSEASG00005014968	BRIX1	100	91.501	Equus_asinus_asinus
ENSRNOG00000018021	Brix1	100	90.652	ENSECAG00000000377	BRIX1	92	91.218	Equus_caballus
ENSRNOG00000018021	Brix1	100	82.720	ENSEEUG00000008350	BRIX1	100	82.720	Erinaceus_europaeus
ENSRNOG00000018021	Brix1	97	69.679	ENSELUG00000009050	bxdc2	94	69.679	Esox_lucius
ENSRNOG00000018021	Brix1	100	91.785	ENSFCAG00000042465	BRIX1	100	91.785	Felis_catus
ENSRNOG00000018021	Brix1	95	72.434	ENSFALG00000002106	BRIX1	97	71.067	Ficedula_albicollis
ENSRNOG00000018021	Brix1	100	90.652	ENSFDAG00000018960	BRIX1	100	90.652	Fukomys_damarensis
ENSRNOG00000018021	Brix1	99	70.774	ENSFHEG00000004488	bxdc2	99	70.774	Fundulus_heteroclitus
ENSRNOG00000018021	Brix1	77	78.889	ENSGMOG00000002425	bxdc2	94	78.889	Gadus_morhua
ENSRNOG00000018021	Brix1	95	76.276	ENSGALG00000003373	BRIX1	99	75.287	Gallus_gallus
ENSRNOG00000018021	Brix1	91	71.077	ENSGAFG00000011947	bxdc2	99	69.628	Gambusia_affinis
ENSRNOG00000018021	Brix1	93	69.325	ENSGACG00000016491	bxdc2	99	68.622	Gasterosteus_aculeatus
ENSRNOG00000018021	Brix1	92	78.947	ENSGAGG00000011959	BRIX1	100	76.353	Gopherus_agassizii
ENSRNOG00000018021	Brix1	100	91.218	ENSGGOG00000004225	BRIX1	100	91.501	Gorilla_gorilla
ENSRNOG00000018021	Brix1	97	72.353	ENSHBUG00000017923	bxdc2	98	72.353	Haplochromis_burtoni
ENSRNOG00000018021	Brix1	100	90.368	ENSHGLG00000004566	BRIX1	100	90.368	Heterocephalus_glaber_female
ENSRNOG00000018021	Brix1	95	72.917	ENSHGLG00000017782	-	98	72.917	Heterocephalus_glaber_female
ENSRNOG00000018021	Brix1	100	71.105	ENSHGLG00000002055	-	100	71.105	Heterocephalus_glaber_female
ENSRNOG00000018021	Brix1	100	71.671	ENSHGLG00000000296	-	100	71.671	Heterocephalus_glaber_female
ENSRNOG00000018021	Brix1	96	71.893	ENSHGLG00000010349	-	98	71.893	Heterocephalus_glaber_female
ENSRNOG00000018021	Brix1	93	76.524	ENSHGLG00100000909	-	81	75.000	Heterocephalus_glaber_male
ENSRNOG00000018021	Brix1	100	90.652	ENSHGLG00100002204	-	100	90.652	Heterocephalus_glaber_male
ENSRNOG00000018021	Brix1	100	69.688	ENSHGLG00100001527	-	100	69.688	Heterocephalus_glaber_male
ENSRNOG00000018021	Brix1	99	81.818	ENSHGLG00100000068	-	97	81.818	Heterocephalus_glaber_male
ENSRNOG00000018021	Brix1	97	70.554	ENSHCOG00000011674	bxdc2	98	70.554	Hippocampus_comes
ENSRNOG00000018021	Brix1	94	69.970	ENSIPUG00000015099	brix1	95	69.970	Ictalurus_punctatus
ENSRNOG00000018021	Brix1	100	90.085	ENSSTOG00000009600	BRIX1	100	90.652	Ictidomys_tridecemlineatus
ENSRNOG00000018021	Brix1	100	81.020	ENSJJAG00000004662	-	100	81.020	Jaculus_jaculus
ENSRNOG00000018021	Brix1	97	78.717	ENSJJAG00000009708	-	98	78.717	Jaculus_jaculus
ENSRNOG00000018021	Brix1	74	92.015	ENSJJAG00000001806	-	100	92.015	Jaculus_jaculus
ENSRNOG00000018021	Brix1	100	82.720	ENSJJAG00000001423	-	100	82.720	Jaculus_jaculus
ENSRNOG00000018021	Brix1	92	72.755	ENSKMAG00000014487	bxdc2	98	71.176	Kryptolebias_marmoratus
ENSRNOG00000018021	Brix1	97	66.471	ENSLBEG00000018123	bxdc2	99	67.055	Labrus_bergylta
ENSRNOG00000018021	Brix1	99	72.622	ENSLACG00000005971	BRIX1	99	72.622	Latimeria_chalumnae
ENSRNOG00000018021	Brix1	92	72.222	ENSLOCG00000011774	bxdc2	99	69.855	Lepisosteus_oculatus
ENSRNOG00000018021	Brix1	100	91.218	ENSLAFG00000007249	BRIX1	100	91.218	Loxodonta_africana
ENSRNOG00000018021	Brix1	100	91.785	ENSMFAG00000033107	BRIX1	100	91.785	Macaca_fascicularis
ENSRNOG00000018021	Brix1	100	91.785	ENSMMUG00000038794	BRIX1	100	91.785	Macaca_mulatta
ENSRNOG00000018021	Brix1	100	91.501	ENSMNEG00000039324	BRIX1	100	91.501	Macaca_nemestrina
ENSRNOG00000018021	Brix1	100	91.785	ENSMLEG00000041564	BRIX1	100	91.785	Mandrillus_leucophaeus
ENSRNOG00000018021	Brix1	99	72.126	ENSMAMG00000015004	bxdc2	100	72.365	Mastacembelus_armatus
ENSRNOG00000018021	Brix1	97	72.353	ENSMZEG00005019808	bxdc2	98	72.353	Maylandia_zebra
ENSRNOG00000018021	Brix1	54	76.720	ENSMGAG00000003156	BRIX1	99	75.000	Meleagris_gallopavo
ENSRNOG00000018021	Brix1	85	96.333	ENSMAUG00000014172	Brix1	100	96.333	Mesocricetus_auratus
ENSRNOG00000018021	Brix1	100	89.518	ENSMICG00000005672	BRIX1	100	89.802	Microcebus_murinus
ENSRNOG00000018021	Brix1	100	93.201	ENSMOCG00000018798	Brix1	100	93.201	Microtus_ochrogaster
ENSRNOG00000018021	Brix1	97	73.178	ENSMMOG00000000861	bxdc2	99	73.529	Mola_mola
ENSRNOG00000018021	Brix1	98	80.692	ENSMODG00000020386	BRIX1	98	80.692	Monodelphis_domestica
ENSRNOG00000018021	Brix1	97	65.217	ENSMALG00000020437	bxdc2	98	65.217	Monopterus_albus
ENSRNOG00000018021	Brix1	100	95.751	MGP_CAROLIEiJ_G0019665	Brix1	100	95.751	Mus_caroli
ENSRNOG00000018021	Brix1	100	96.601	ENSMUSG00000022247	Brix1	100	96.601	Mus_musculus
ENSRNOG00000018021	Brix1	100	96.601	MGP_SPRETEiJ_G0020562	Brix1	100	96.601	Mus_spretus
ENSRNOG00000018021	Brix1	100	91.218	ENSMPUG00000015137	BRIX1	100	91.218	Mustela_putorius_furo
ENSRNOG00000018021	Brix1	75	91.288	ENSMLUG00000029255	BRIX1	100	92.803	Myotis_lucifugus
ENSRNOG00000018021	Brix1	98	89.017	ENSNGAG00000002585	-	100	89.595	Nannospalax_galili
ENSRNOG00000018021	Brix1	100	89.235	ENSNGAG00000021812	-	99	90.805	Nannospalax_galili
ENSRNOG00000018021	Brix1	97	72.059	ENSNBRG00000008850	bxdc2	93	72.059	Neolamprologus_brichardi
ENSRNOG00000018021	Brix1	100	87.535	ENSNLEG00000032149	BRIX1	100	87.819	Nomascus_leucogenys
ENSRNOG00000018021	Brix1	98	67.435	ENSMEUG00000016482	BRIX1	98	68.012	Notamacropus_eugenii
ENSRNOG00000018021	Brix1	57	95.522	ENSOPRG00000012886	BRIX1	100	95.522	Ochotona_princeps
ENSRNOG00000018021	Brix1	83	89.384	ENSODEG00000019171	-	100	90.068	Octodon_degus
ENSRNOG00000018021	Brix1	100	59.773	ENSODEG00000002389	-	100	60.907	Octodon_degus
ENSRNOG00000018021	Brix1	100	73.521	ENSODEG00000010997	-	100	74.930	Octodon_degus
ENSRNOG00000018021	Brix1	100	71.023	ENSONIG00000007725	bxdc2	99	71.023	Oreochromis_niloticus
ENSRNOG00000018021	Brix1	83	83.618	ENSOANG00000014525	-	98	83.618	Ornithorhynchus_anatinus
ENSRNOG00000018021	Brix1	100	90.368	ENSOCUG00000014478	BRIX1	100	90.652	Oryctolagus_cuniculus
ENSRNOG00000018021	Brix1	99	70.690	ENSORLG00000005895	bxdc2	99	70.690	Oryzias_latipes
ENSRNOG00000018021	Brix1	99	70.690	ENSORLG00020005201	bxdc2	99	70.690	Oryzias_latipes_hni
ENSRNOG00000018021	Brix1	99	70.402	ENSORLG00015011685	bxdc2	99	70.402	Oryzias_latipes_hsok
ENSRNOG00000018021	Brix1	99	70.402	ENSOMEG00000007680	bxdc2	99	70.402	Oryzias_melastigma
ENSRNOG00000018021	Brix1	100	88.385	ENSOGAG00000014827	BRIX1	100	88.983	Otolemur_garnettii
ENSRNOG00000018021	Brix1	100	92.068	ENSOARG00000011539	BRIX1	100	92.351	Ovis_aries
ENSRNOG00000018021	Brix1	100	91.501	ENSPPAG00000038183	BRIX1	100	91.785	Pan_paniscus
ENSRNOG00000018021	Brix1	100	92.068	ENSPPRG00000023961	BRIX1	100	92.068	Panthera_pardus
ENSRNOG00000018021	Brix1	100	91.785	ENSPTIG00000006466	BRIX1	100	91.785	Panthera_tigris_altaica
ENSRNOG00000018021	Brix1	100	91.501	ENSPTRG00000016784	BRIX1	100	91.785	Pan_troglodytes
ENSRNOG00000018021	Brix1	99	92.000	ENSPANG00000016504	BRIX1	98	92.000	Papio_anubis
ENSRNOG00000018021	Brix1	90	73.270	ENSPKIG00000005920	bxdc2	85	70.231	Paramormyrops_kingsleyae
ENSRNOG00000018021	Brix1	78	80.364	ENSPSIG00000011219	BRIX1	100	80.364	Pelodiscus_sinensis
ENSRNOG00000018021	Brix1	97	64.620	ENSPMGG00000022988	bxdc2	98	64.620	Periophthalmus_magnuspinnatus
ENSRNOG00000018021	Brix1	100	93.768	ENSPEMG00000016920	Brix1	100	93.768	Peromyscus_maniculatus_bairdii
ENSRNOG00000018021	Brix1	98	80.980	ENSPCIG00000022778	BRIX1	98	81.556	Phascolarctos_cinereus
ENSRNOG00000018021	Brix1	99	68.466	ENSPFOG00000008577	bxdc2	82	69.341	Poecilia_formosa
ENSRNOG00000018021	Brix1	99	68.466	ENSPLAG00000006772	bxdc2	91	69.341	Poecilia_latipinna
ENSRNOG00000018021	Brix1	99	69.143	ENSPMEG00000020229	bxdc2	91	69.341	Poecilia_mexicana
ENSRNOG00000018021	Brix1	99	69.034	ENSPREG00000017461	bxdc2	91	69.914	Poecilia_reticulata
ENSRNOG00000018021	Brix1	100	87.535	ENSPPYG00000015390	BRIX1	100	87.819	Pongo_abelii
ENSRNOG00000018021	Brix1	53	87.701	ENSPCAG00000005158	-	100	87.701	Procavia_capensis
ENSRNOG00000018021	Brix1	100	90.368	ENSPCOG00000018281	-	100	90.368	Propithecus_coquereli
ENSRNOG00000018021	Brix1	97	65.588	ENSPCOG00000016748	-	94	67.988	Propithecus_coquereli
ENSRNOG00000018021	Brix1	85	90.000	ENSPVAG00000016925	BRIX1	100	90.000	Pteropus_vampyrus
ENSRNOG00000018021	Brix1	97	72.353	ENSPNYG00000007707	bxdc2	98	72.353	Pundamilia_nyererei
ENSRNOG00000018021	Brix1	92	70.370	ENSPNAG00000010431	bxdc2	96	68.657	Pygocentrus_nattereri
ENSRNOG00000018021	Brix1	99	92.286	ENSRBIG00000042083	BRIX1	98	92.286	Rhinopithecus_bieti
ENSRNOG00000018021	Brix1	99	92.571	ENSRROG00000031228	BRIX1	98	92.571	Rhinopithecus_roxellana
ENSRNOG00000018021	Brix1	71	47.148	YOL077C	-	90	47.148	Saccharomyces_cerevisiae
ENSRNOG00000018021	Brix1	100	89.235	ENSSBOG00000017845	-	100	89.518	Saimiri_boliviensis_boliviensis
ENSRNOG00000018021	Brix1	100	90.935	ENSSBOG00000033290	-	100	91.218	Saimiri_boliviensis_boliviensis
ENSRNOG00000018021	Brix1	93	81.818	ENSSHAG00000010794	BRIX1	98	80.692	Sarcophilus_harrisii
ENSRNOG00000018021	Brix1	91	71.118	ENSSFOG00015022435	brix1	99	68.406	Scleropages_formosus
ENSRNOG00000018021	Brix1	97	69.096	ENSSMAG00000005909	bxdc2	99	70.088	Scophthalmus_maximus
ENSRNOG00000018021	Brix1	97	72.595	ENSSDUG00000016234	bxdc2	98	72.965	Seriola_dumerili
ENSRNOG00000018021	Brix1	97	72.886	ENSSLDG00000007044	bxdc2	98	72.754	Seriola_lalandi_dorsalis
ENSRNOG00000018021	Brix1	100	84.958	ENSSARG00000009879	BRIX1	100	85.237	Sorex_araneus
ENSRNOG00000018021	Brix1	85	78.000	ENSSPUG00000019166	-	100	78.000	Sphenodon_punctatus
ENSRNOG00000018021	Brix1	99	70.085	ENSSPUG00000000011	-	99	70.085	Sphenodon_punctatus
ENSRNOG00000018021	Brix1	97	72.059	ENSSPAG00000006309	bxdc2	98	72.059	Stegastes_partitus
ENSRNOG00000018021	Brix1	100	91.218	ENSSSCG00000016827	BRIX1	99	91.501	Sus_scrofa
ENSRNOG00000018021	Brix1	94	74.622	ENSTGUG00000001961	BRIX1	99	73.066	Taeniopygia_guttata
ENSRNOG00000018021	Brix1	97	71.720	ENSTRUG00000011403	bxdc2	99	71.720	Takifugu_rubripes
ENSRNOG00000018021	Brix1	92	73.089	ENSTNIG00000007517	bxdc2	99	69.774	Tetraodon_nigroviridis
ENSRNOG00000018021	Brix1	85	89.000	ENSTBEG00000011652	BRIX1	100	89.000	Tupaia_belangeri
ENSRNOG00000018021	Brix1	100	90.935	ENSTTRG00000003262	BRIX1	100	91.218	Tursiops_truncatus
ENSRNOG00000018021	Brix1	100	79.213	ENSUAMG00000022481	BRIX1	100	79.379	Ursus_americanus
ENSRNOG00000018021	Brix1	100	91.785	ENSUMAG00000012900	BRIX1	100	91.785	Ursus_maritimus
ENSRNOG00000018021	Brix1	63	91.403	ENSVPAG00000010128	BRIX1	63	91.403	Vicugna_pacos
ENSRNOG00000018021	Brix1	100	83.286	ENSVVUG00000022099	BRIX1	100	83.286	Vulpes_vulpes
ENSRNOG00000018021	Brix1	98	73.410	ENSXETG00000000703	brix1	100	73.410	Xenopus_tropicalis
ENSRNOG00000018021	Brix1	99	70.487	ENSXCOG00000002461	bxdc2	99	70.487	Xiphophorus_couchianus
ENSRNOG00000018021	Brix1	99	70.085	ENSXMAG00000004284	bxdc2	86	70.085	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component