EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018069 (Gene tree)
Gene ID: 305887
Gene Symbol: Ngdn
Alias: LOC305887|RGD1310211
Full Name: neuroguidin
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 7244 bases
Position: chr15:33677597-33684840
Accession: 1310211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000024337	Sas10_Utp3	PF04000.15	5.7e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000024337	-	1202	XM_006251966	ENSRNOP00000024337	315 (aa)	XP_006252028	D3ZBL3

Gene Model

Click here to download ENSRNOG00000018069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018069	Ngdn	98	90.000	ENSG00000129460	NGDN	100	92.199	Homo_sapiens
ENSRNOG00000018069	Ngdn	81	55.426	ENSAPOG00000016411	ngdn	91	55.056	Acanthochromis_polyacanthus
ENSRNOG00000018069	Ngdn	93	89.078	ENSAMEG00000016660	NGDN	92	89.078	Ailuropoda_melanoleuca
ENSRNOG00000018069	Ngdn	89	52.650	ENSACIG00000021676	ngdn	88	52.650	Amphilophus_citrinellus
ENSRNOG00000018069	Ngdn	90	53.819	ENSAOCG00000015818	ngdn	92	53.535	Amphiprion_ocellaris
ENSRNOG00000018069	Ngdn	83	55.133	ENSAPEG00000009589	ngdn	92	54.779	Amphiprion_percula
ENSRNOG00000018069	Ngdn	92	51.864	ENSATEG00000020513	ngdn	92	52.881	Anabas_testudineus
ENSRNOG00000018069	Ngdn	93	68.707	ENSACAG00000007340	NGDN	89	68.385	Anolis_carolinensis
ENSRNOG00000018069	Ngdn	93	89.116	ENSANAG00000037066	NGDN	94	88.814	Aotus_nancymaae
ENSRNOG00000018069	Ngdn	93	54.000	ENSACLG00000016289	ngdn	93	53.667	Astatotilapia_calliptera
ENSRNOG00000018069	Ngdn	93	51.014	ENSAMXG00000000514	ngdn	91	52.669	Astyanax_mexicanus
ENSRNOG00000018069	Ngdn	94	90.508	ENSBTAG00000009595	NGDN	93	92.593	Bos_taurus
ENSRNOG00000018069	Ngdn	73	38.197	WBGene00003059	lpd-2	69	39.662	Caenorhabditis_elegans
ENSRNOG00000018069	Ngdn	99	89.172	ENSCJAG00000007530	NGDN	94	89.492	Callithrix_jacchus
ENSRNOG00000018069	Ngdn	93	89.420	ENSCAFG00000011631	NGDN	92	89.116	Canis_familiaris
ENSRNOG00000018069	Ngdn	93	89.420	ENSCAFG00020004943	NGDN	92	89.116	Canis_lupus_dingo
ENSRNOG00000018069	Ngdn	94	90.169	ENSCHIG00000015780	NGDN	94	90.169	Capra_hircus
ENSRNOG00000018069	Ngdn	99	87.898	ENSTSYG00000009606	NGDN	94	88.136	Carlito_syrichta
ENSRNOG00000018069	Ngdn	80	86.957	ENSCAPG00000014742	NGDN	94	87.059	Cavia_aperea
ENSRNOG00000018069	Ngdn	93	89.761	ENSCPOG00000008240	NGDN	94	89.831	Cavia_porcellus
ENSRNOG00000018069	Ngdn	93	89.456	ENSCCAG00000023047	NGDN	93	89.116	Cebus_capucinus
ENSRNOG00000018069	Ngdn	93	89.761	ENSCATG00000042790	NGDN	94	90.000	Cercocebus_atys
ENSRNOG00000018069	Ngdn	94	89.153	ENSCLAG00000012885	NGDN	94	88.475	Chinchilla_lanigera
ENSRNOG00000018069	Ngdn	93	89.761	ENSCSAG00000015952	NGDN	94	89.492	Chlorocebus_sabaeus
ENSRNOG00000018069	Ngdn	94	89.831	ENSCHOG00000009857	NGDN	95	89.831	Choloepus_hoffmanni
ENSRNOG00000018069	Ngdn	97	62.541	ENSCPBG00000025903	NGDN	73	61.716	Chrysemys_picta_bellii
ENSRNOG00000018069	Ngdn	93	89.761	ENSCANG00000031356	NGDN	94	89.492	Colobus_angolensis_palliatus
ENSRNOG00000018069	Ngdn	93	92.150	ENSCGRG00001024371	Ngdn	94	91.864	Cricetulus_griseus_chok1gshd
ENSRNOG00000018069	Ngdn	93	92.150	ENSCGRG00000018219	Ngdn	94	91.864	Cricetulus_griseus_crigri
ENSRNOG00000018069	Ngdn	89	53.710	ENSCSEG00000008801	ngdn	88	53.710	Cynoglossus_semilaevis
ENSRNOG00000018069	Ngdn	89	55.245	ENSDARG00000045372	ngdn	89	53.952	Danio_rerio
ENSRNOG00000018069	Ngdn	96	88.119	ENSDNOG00000005395	NGDN	93	88.737	Dasypus_novemcinctus
ENSRNOG00000018069	Ngdn	92	89.655	ENSDORG00000010731	Ngdn	93	89.655	Dipodomys_ordii
ENSRNOG00000018069	Ngdn	82	41.007	FBgn0031736	CG11030	88	42.034	Drosophila_melanogaster
ENSRNOG00000018069	Ngdn	94	80.339	ENSETEG00000007531	NGDN	95	80.339	Echinops_telfairi
ENSRNOG00000018069	Ngdn	93	47.000	ENSEBUG00000000664	ngdn	91	46.667	Eptatretus_burgeri
ENSRNOG00000018069	Ngdn	87	91.971	ENSEASG00005011793	NGDN	94	91.971	Equus_asinus_asinus
ENSRNOG00000018069	Ngdn	99	89.490	ENSECAG00000006081	NGDN	94	89.492	Equus_caballus
ENSRNOG00000018069	Ngdn	75	87.342	ENSEEUG00000011829	NGDN	100	87.342	Erinaceus_europaeus
ENSRNOG00000018069	Ngdn	92	53.925	ENSELUG00000022676	ngdn	86	52.333	Esox_lucius
ENSRNOG00000018069	Ngdn	99	88.217	ENSFCAG00000009093	NGDN	94	89.831	Felis_catus
ENSRNOG00000018069	Ngdn	94	90.847	ENSFDAG00000011611	NGDN	94	90.847	Fukomys_damarensis
ENSRNOG00000018069	Ngdn	92	54.576	ENSFHEG00000007207	ngdn	92	54.237	Fundulus_heteroclitus
ENSRNOG00000018069	Ngdn	89	52.669	ENSGMOG00000003876	ngdn	99	50.871	Gadus_morhua
ENSRNOG00000018069	Ngdn	92	54.181	ENSGAFG00000017102	ngdn	92	53.898	Gambusia_affinis
ENSRNOG00000018069	Ngdn	90	52.759	ENSGACG00000002164	ngdn	99	53.448	Gasterosteus_aculeatus
ENSRNOG00000018069	Ngdn	97	62.215	ENSGAGG00000016471	NGDN	93	60.976	Gopherus_agassizii
ENSRNOG00000018069	Ngdn	96	89.769	ENSGGOG00000005000	NGDN	94	90.169	Gorilla_gorilla
ENSRNOG00000018069	Ngdn	93	53.667	ENSHBUG00000019489	ngdn	93	53.333	Haplochromis_burtoni
ENSRNOG00000018069	Ngdn	94	90.508	ENSHGLG00000008896	NGDN	94	90.508	Heterocephalus_glaber_female
ENSRNOG00000018069	Ngdn	94	90.508	ENSHGLG00100014352	NGDN	94	90.508	Heterocephalus_glaber_male
ENSRNOG00000018069	Ngdn	91	51.379	ENSHCOG00000019913	ngdn	90	51.034	Hippocampus_comes
ENSRNOG00000018069	Ngdn	90	53.873	ENSIPUG00000008128	ngdn	89	53.873	Ictalurus_punctatus
ENSRNOG00000018069	Ngdn	94	91.525	ENSSTOG00000002637	NGDN	94	91.525	Ictidomys_tridecemlineatus
ENSRNOG00000018069	Ngdn	99	80.573	ENSJJAG00000010601	-	93	80.339	Jaculus_jaculus
ENSRNOG00000018069	Ngdn	92	53.767	ENSKMAG00000018719	ngdn	89	53.425	Kryptolebias_marmoratus
ENSRNOG00000018069	Ngdn	90	53.472	ENSLBEG00000027237	ngdn	93	53.952	Labrus_bergylta
ENSRNOG00000018069	Ngdn	84	59.707	ENSLACG00000005765	NGDN	91	60.440	Latimeria_chalumnae
ENSRNOG00000018069	Ngdn	93	91.156	ENSLAFG00000013953	NGDN	94	90.847	Loxodonta_africana
ENSRNOG00000018069	Ngdn	93	89.420	ENSMFAG00000033387	NGDN	94	89.153	Macaca_fascicularis
ENSRNOG00000018069	Ngdn	93	89.420	ENSMMUG00000014766	NGDN	94	89.153	Macaca_mulatta
ENSRNOG00000018069	Ngdn	93	89.420	ENSMNEG00000038334	NGDN	94	89.655	Macaca_nemestrina
ENSRNOG00000018069	Ngdn	93	89.761	ENSMLEG00000037525	NGDN	94	89.492	Mandrillus_leucophaeus
ENSRNOG00000018069	Ngdn	87	52.174	ENSMAMG00000007995	ngdn	83	50.526	Mastacembelus_armatus
ENSRNOG00000018069	Ngdn	93	54.000	ENSMZEG00005011874	ngdn	93	53.667	Maylandia_zebra
ENSRNOG00000018069	Ngdn	78	93.061	ENSMAUG00000011909	Ngdn	93	92.713	Mesocricetus_auratus
ENSRNOG00000018069	Ngdn	99	89.490	ENSMICG00000010111	NGDN	94	89.492	Microcebus_murinus
ENSRNOG00000018069	Ngdn	93	91.156	ENSMOCG00000021605	Ngdn	94	90.847	Microtus_ochrogaster
ENSRNOG00000018069	Ngdn	88	51.429	ENSMMOG00000005420	ngdn	86	50.177	Mola_mola
ENSRNOG00000018069	Ngdn	94	84.746	ENSMODG00000004257	NGDN	91	84.746	Monodelphis_domestica
ENSRNOG00000018069	Ngdn	99	50.470	ENSMALG00000019654	ngdn	93	51.163	Monopterus_albus
ENSRNOG00000018069	Ngdn	94	94.576	MGP_CAROLIEiJ_G0019285	Ngdn	94	94.576	Mus_caroli
ENSRNOG00000018069	Ngdn	94	94.915	ENSMUSG00000022204	Ngdn	94	94.915	Mus_musculus
ENSRNOG00000018069	Ngdn	94	94.915	MGP_PahariEiJ_G0030302	Ngdn	94	94.915	Mus_pahari
ENSRNOG00000018069	Ngdn	94	95.254	MGP_SPRETEiJ_G0020174	Ngdn	94	95.254	Mus_spretus
ENSRNOG00000018069	Ngdn	86	91.481	ENSMPUG00000006439	NGDN	93	91.481	Mustela_putorius_furo
ENSRNOG00000018069	Ngdn	92	88.581	ENSMLUG00000017232	NGDN	91	87.629	Myotis_lucifugus
ENSRNOG00000018069	Ngdn	93	90.444	ENSNGAG00000003165	Ngdn	94	90.169	Nannospalax_galili
ENSRNOG00000018069	Ngdn	82	59.259	ENSNBRG00000023962	ngdn	88	48.611	Neolamprologus_brichardi
ENSRNOG00000018069	Ngdn	93	90.444	ENSNLEG00000027739	NGDN	94	90.169	Nomascus_leucogenys
ENSRNOG00000018069	Ngdn	94	84.746	ENSMEUG00000010596	NGDN	95	84.746	Notamacropus_eugenii
ENSRNOG00000018069	Ngdn	95	87.584	ENSOPRG00000016594	NGDN	94	87.797	Ochotona_princeps
ENSRNOG00000018069	Ngdn	93	89.078	ENSODEG00000002730	NGDN	93	90.106	Octodon_degus
ENSRNOG00000018069	Ngdn	93	53.333	ENSONIG00000008106	ngdn	93	53.333	Oreochromis_niloticus
ENSRNOG00000018069	Ngdn	94	81.081	ENSOANG00000013060	NGDN	94	81.081	Ornithorhynchus_anatinus
ENSRNOG00000018069	Ngdn	95	86.577	ENSOCUG00000013973	NGDN	94	89.492	Oryctolagus_cuniculus
ENSRNOG00000018069	Ngdn	88	51.957	ENSORLG00000006124	ngdn	84	51.724	Oryzias_latipes
ENSRNOG00000018069	Ngdn	88	52.313	ENSORLG00020004656	ngdn	90	51.724	Oryzias_latipes_hni
ENSRNOG00000018069	Ngdn	88	51.957	ENSORLG00015001467	ngdn	90	51.724	Oryzias_latipes_hsok
ENSRNOG00000018069	Ngdn	88	53.901	ENSOMEG00000016586	ngdn	90	52.759	Oryzias_melastigma
ENSRNOG00000018069	Ngdn	93	89.078	ENSOGAG00000008735	NGDN	94	88.814	Otolemur_garnettii
ENSRNOG00000018069	Ngdn	94	89.492	ENSOARG00000019301	NGDN	94	89.492	Ovis_aries
ENSRNOG00000018069	Ngdn	96	89.769	ENSPPAG00000039327	NGDN	94	90.169	Pan_paniscus
ENSRNOG00000018069	Ngdn	93	88.737	ENSPPRG00000020120	NGDN	94	89.831	Panthera_pardus
ENSRNOG00000018069	Ngdn	93	88.396	ENSPTIG00000012462	NGDN	94	89.492	Panthera_tigris_altaica
ENSRNOG00000018069	Ngdn	96	89.439	ENSPTRG00000006177	NGDN	94	89.831	Pan_troglodytes
ENSRNOG00000018069	Ngdn	93	89.420	ENSPANG00000026138	NGDN	94	89.153	Papio_anubis
ENSRNOG00000018069	Ngdn	89	55.674	ENSPKIG00000008183	ngdn	85	53.584	Paramormyrops_kingsleyae
ENSRNOG00000018069	Ngdn	92	49.660	ENSPMGG00000022036	ngdn	92	50.000	Periophthalmus_magnuspinnatus
ENSRNOG00000018069	Ngdn	93	91.468	ENSPEMG00000010734	Ngdn	94	91.525	Peromyscus_maniculatus_bairdii
ENSRNOG00000018069	Ngdn	97	54.808	ENSPMAG00000004469	ngdn	91	54.795	Petromyzon_marinus
ENSRNOG00000018069	Ngdn	92	85.223	ENSPCIG00000012961	NGDN	92	85.223	Phascolarctos_cinereus
ENSRNOG00000018069	Ngdn	92	54.849	ENSPFOG00000010423	ngdn	92	54.576	Poecilia_formosa
ENSRNOG00000018069	Ngdn	92	54.849	ENSPLAG00000022684	ngdn	92	54.576	Poecilia_latipinna
ENSRNOG00000018069	Ngdn	92	55.184	ENSPMEG00000020850	ngdn	92	54.915	Poecilia_mexicana
ENSRNOG00000018069	Ngdn	92	54.181	ENSPREG00000011208	ngdn	92	53.898	Poecilia_reticulata
ENSRNOG00000018069	Ngdn	99	90.032	ENSPPYG00000005670	NGDN	94	90.508	Pongo_abelii
ENSRNOG00000018069	Ngdn	61	87.719	ENSPCAG00000007252	-	63	87.719	Procavia_capensis
ENSRNOG00000018069	Ngdn	94	89.831	ENSPCOG00000027627	NGDN	94	89.831	Propithecus_coquereli
ENSRNOG00000018069	Ngdn	94	89.153	ENSPVAG00000005178	NGDN	95	88.475	Pteropus_vampyrus
ENSRNOG00000018069	Ngdn	93	53.333	ENSPNYG00000013193	ngdn	91	53.000	Pundamilia_nyererei
ENSRNOG00000018069	Ngdn	90	52.613	ENSPNAG00000005995	ngdn	89	52.613	Pygocentrus_nattereri
ENSRNOG00000018069	Ngdn	93	89.761	ENSRBIG00000035850	NGDN	94	89.492	Rhinopithecus_bieti
ENSRNOG00000018069	Ngdn	93	89.761	ENSRROG00000031932	NGDN	93	91.111	Rhinopithecus_roxellana
ENSRNOG00000018069	Ngdn	93	89.796	ENSSBOG00000029466	NGDN	99	89.655	Saimiri_boliviensis_boliviensis
ENSRNOG00000018069	Ngdn	94	83.390	ENSSHAG00000015351	NGDN	94	83.390	Sarcophilus_harrisii
ENSRNOG00000018069	Ngdn	88	56.584	ENSSFOG00015012601	ngdn	88	56.383	Scleropages_formosus
ENSRNOG00000018069	Ngdn	93	52.508	ENSSMAG00000020166	ngdn	93	52.174	Scophthalmus_maximus
ENSRNOG00000018069	Ngdn	90	53.472	ENSSDUG00000020600	ngdn	90	53.819	Seriola_dumerili
ENSRNOG00000018069	Ngdn	90	53.472	ENSSLDG00000007140	ngdn	90	53.819	Seriola_lalandi_dorsalis
ENSRNOG00000018069	Ngdn	93	81.973	ENSSARG00000000643	NGDN	95	83.051	Sorex_araneus
ENSRNOG00000018069	Ngdn	91	49.655	ENSSPAG00000021672	ngdn	88	48.966	Stegastes_partitus
ENSRNOG00000018069	Ngdn	93	89.420	ENSSSCG00000002020	-	93	89.420	Sus_scrofa
ENSRNOG00000018069	Ngdn	90	50.000	ENSTRUG00000006677	ngdn	90	50.345	Takifugu_rubripes
ENSRNOG00000018069	Ngdn	91	51.203	ENSTNIG00000018972	ngdn	91	51.546	Tetraodon_nigroviridis
ENSRNOG00000018069	Ngdn	99	89.809	ENSTTRG00000010655	NGDN	95	90.444	Tursiops_truncatus
ENSRNOG00000018069	Ngdn	93	89.078	ENSUAMG00000007475	NGDN	93	91.111	Ursus_americanus
ENSRNOG00000018069	Ngdn	93	89.420	ENSUMAG00000014789	NGDN	79	89.420	Ursus_maritimus
ENSRNOG00000018069	Ngdn	93	89.116	ENSVPAG00000010012	NGDN	95	89.116	Vicugna_pacos
ENSRNOG00000018069	Ngdn	93	88.737	ENSVVUG00000025104	NGDN	94	88.435	Vulpes_vulpes
ENSRNOG00000018069	Ngdn	92	62.887	ENSXETG00000014562	ngdn	92	62.887	Xenopus_tropicalis
ENSRNOG00000018069	Ngdn	90	51.389	ENSXCOG00000005102	ngdn	88	51.943	Xiphophorus_couchianus
ENSRNOG00000018069	Ngdn	92	54.237	ENSXMAG00000006206	ngdn	92	54.237	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component