EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000018153 (Gene tree)
Gene ID
300996
Gene Symbol
Rbm5
Alias
LOC300996
Full Name
RNA binding motif protein 5
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
29233 bases
Position
chr8:116502937-116532169
Accession
1305059
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000024529zf-RanBPPF00641.189.3e-1011
ENSRNOP00000072378zf-RanBPPF00641.189.3e-1011
ENSRNOP00000024529RRM_1PF00076.221.5e-1411
ENSRNOP00000072378RRM_1PF00076.221.5e-1411
ENSRNOP00000024529G-patchPF01585.235e-1911
ENSRNOP00000072378G-patchPF01585.235e-1911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000024529-2994-ENSRNOP00000024529815 (aa)-B2GV05
ENSRNOT00000085364-3103XM_006243738ENSRNOP00000072378815 (aa)XP_006243800B2GV05
Gene Model
Click here to download ENSRNOG00000018153's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018153's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000018153Rbm59850.219ENSRNOG00000008472Rbm109551.648
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000018153Rbm510098.282ENSG00000003756RBM5100100.000Homo_sapiens
ENSRNOG00000018153Rbm510060.473ENSAPOG00000006011-10060.382Acanthochromis_polyacanthus
ENSRNOG00000018153Rbm510062.081ENSAPOG00000016625rbm510061.512Acanthochromis_polyacanthus
ENSRNOG00000018153Rbm510098.282ENSAMEG00000012005RBM510098.282Ailuropoda_melanoleuca
ENSRNOG00000018153Rbm57659.558ENSACIG00000007571rbm59869.312Amphilophus_citrinellus
ENSRNOG00000018153Rbm59958.263ENSACIG00000021310-9957.229Amphilophus_citrinellus
ENSRNOG00000018153Rbm59959.829ENSAOCG00000017312-9960.073Amphiprion_ocellaris
ENSRNOG00000018153Rbm510061.565ENSAOCG00000002880rbm510060.880Amphiprion_ocellaris
ENSRNOG00000018153Rbm59060.255ENSAPEG00000011862rbm59260.385Amphiprion_percula
ENSRNOG00000018153Rbm510060.947ENSAPEG00000018222RBM510060.382Amphiprion_percula
ENSRNOG00000018153Rbm510059.463ENSATEG00000003838-10058.012Anabas_testudineus
ENSRNOG00000018153Rbm510061.717ENSATEG00000024663rbm510061.215Anabas_testudineus
ENSRNOG00000018153Rbm59487.435ENSAPLG00000011176RBM59987.467Anas_platyrhynchos
ENSRNOG00000018153Rbm510084.412ENSACAG00000008580RBM510084.754Anolis_carolinensis
ENSRNOG00000018153Rbm510098.405ENSANAG00000025199RBM510098.405Aotus_nancymaae
ENSRNOG00000018153Rbm58975.610ENSACLG00000024198RBM510057.565Astatotilapia_calliptera
ENSRNOG00000018153Rbm510061.494ENSACLG00000012748rbm510061.260Astatotilapia_calliptera
ENSRNOG00000018153Rbm58463.824ENSAMXG00000008146rbm59962.483Astyanax_mexicanus
ENSRNOG00000018153Rbm510097.791ENSBTAG00000006330RBM510097.791Bos_taurus
ENSRNOG00000018153Rbm510098.282ENSCJAG00000004740RBM510098.282Callithrix_jacchus
ENSRNOG00000018153Rbm510098.405ENSCAFG00000010866RBM510098.405Canis_familiaris
ENSRNOG00000018153Rbm510098.405ENSCAFG00020022126RBM510098.405Canis_lupus_dingo
ENSRNOG00000018153Rbm510098.037ENSCHIG00000018435RBM510098.037Capra_hircus
ENSRNOG00000018153Rbm58697.421ENSTSYG00000004158RBM510097.421Carlito_syrichta
ENSRNOG00000018153Rbm510080.491ENSCAPG00000013495RBM510080.123Cavia_aperea
ENSRNOG00000018153Rbm510098.037ENSCPOG00000008151RBM510098.037Cavia_porcellus
ENSRNOG00000018153Rbm59998.395ENSCCAG00000026401RBM59998.395Cebus_capucinus
ENSRNOG00000018153Rbm510098.282ENSCATG00000041038RBM510098.282Cercocebus_atys
ENSRNOG00000018153Rbm510097.914ENSCLAG00000007873RBM510097.914Chinchilla_lanigera
ENSRNOG00000018153Rbm510098.282ENSCSAG00000014401RBM510098.282Chlorocebus_sabaeus
ENSRNOG00000018153Rbm58186.082ENSCHOG00000009429RBM58586.082Choloepus_hoffmanni
ENSRNOG00000018153Rbm510086.610ENSCPBG00000002406RBM510087.455Chrysemys_picta_bellii
ENSRNOG00000018153Rbm510095.828ENSCANG00000031250RBM510095.828Colobus_angolensis_palliatus
ENSRNOG00000018153Rbm510098.528ENSCGRG00001010543Rbm510098.528Cricetulus_griseus_chok1gshd
ENSRNOG00000018153Rbm510098.528ENSCGRG00000008475Rbm510098.528Cricetulus_griseus_crigri
ENSRNOG00000018153Rbm59859.609ENSCSEG00000000596rbm59759.346Cynoglossus_semilaevis
ENSRNOG00000018153Rbm510060.349ENSCVAG00000005655rbm510060.950Cyprinodon_variegatus
ENSRNOG00000018153Rbm510056.506ENSDARG00000098280rbm510063.245Danio_rerio
ENSRNOG00000018153Rbm510098.282ENSDNOG00000011756RBM510098.282Dasypus_novemcinctus
ENSRNOG00000018153Rbm510098.896ENSDORG00000007692Rbm510098.896Dipodomys_ordii
ENSRNOG00000018153Rbm59291.067ENSETEG00000012773RBM59391.138Echinops_telfairi
ENSRNOG00000018153Rbm58063.361ENSEBUG00000017034rbm57963.361Eptatretus_burgeri
ENSRNOG00000018153Rbm510098.528ENSEASG00005011835RBM510098.528Equus_asinus_asinus
ENSRNOG00000018153Rbm510098.528ENSECAG00000020447RBM510098.528Equus_caballus
ENSRNOG00000018153Rbm59099.010ENSEEUG00000005943RBM59199.010Erinaceus_europaeus
ENSRNOG00000018153Rbm510063.626ENSELUG00000022467rbm510060.581Esox_lucius
ENSRNOG00000018153Rbm510098.528ENSFCAG00000014639RBM510098.528Felis_catus
ENSRNOG00000018153Rbm59882.847ENSFALG00000008828RBM58387.599Ficedula_albicollis
ENSRNOG00000018153Rbm510094.975ENSFDAG00000001897RBM510094.975Fukomys_damarensis
ENSRNOG00000018153Rbm510062.137ENSFHEG00000015954rbm510076.190Fundulus_heteroclitus
ENSRNOG00000018153Rbm59962.349ENSGMOG00000016224rbm59263.660Gadus_morhua
ENSRNOG00000018153Rbm510048.000ENSGMOG00000007810-8758.580Gadus_morhua
ENSRNOG00000018153Rbm59782.410ENSGALG00000039288RBM58386.675Gallus_gallus
ENSRNOG00000018153Rbm510060.714ENSGAFG00000010690rbm59667.826Gambusia_affinis
ENSRNOG00000018153Rbm510057.938ENSGACG00000000858-10057.143Gasterosteus_aculeatus
ENSRNOG00000018153Rbm510062.710ENSGACG00000010469rbm510061.695Gasterosteus_aculeatus
ENSRNOG00000018153Rbm59586.979ENSGAGG00000007935RBM59987.231Gopherus_agassizii
ENSRNOG00000018153Rbm510098.160ENSGGOG00000014490RBM510098.160Gorilla_gorilla
ENSRNOG00000018153Rbm510060.889ENSHBUG00000001941rbm510060.648Haplochromis_burtoni
ENSRNOG00000018153Rbm58975.610ENSHBUG00000011901-10057.565Haplochromis_burtoni
ENSRNOG00000018153Rbm510097.794ENSHGLG00000014844RBM510097.794Heterocephalus_glaber_female
ENSRNOG00000018153Rbm510097.914ENSHGLG00100010739RBM510097.914Heterocephalus_glaber_male
ENSRNOG00000018153Rbm510053.636ENSHCOG00000004536-10052.105Hippocampus_comes
ENSRNOG00000018153Rbm59558.974ENSHCOG00000017110rbm59958.591Hippocampus_comes
ENSRNOG00000018153Rbm510064.269ENSIPUG00000000640rbm510063.020Ictalurus_punctatus
ENSRNOG00000018153Rbm510098.037ENSSTOG00000013856RBM510098.037Ictidomys_tridecemlineatus
ENSRNOG00000018153Rbm510098.528ENSJJAG00000008844Rbm510098.528Jaculus_jaculus
ENSRNOG00000018153Rbm510061.220ENSKMAG00000006663rbm510061.565Kryptolebias_marmoratus
ENSRNOG00000018153Rbm55862.500ENSLBEG00000002522-9450.337Labrus_bergylta
ENSRNOG00000018153Rbm510058.678ENSLBEG00000010877-9458.865Labrus_bergylta
ENSRNOG00000018153Rbm59974.209ENSLACG00000016572RBM510075.800Latimeria_chalumnae
ENSRNOG00000018153Rbm510065.901ENSLOCG00000010774rbm58674.317Lepisosteus_oculatus
ENSRNOG00000018153Rbm510098.039ENSLAFG00000006733RBM510098.039Loxodonta_africana
ENSRNOG00000018153Rbm510098.282ENSMFAG00000031609RBM510098.282Macaca_fascicularis
ENSRNOG00000018153Rbm59998.272ENSMMUG00000004921RBM59998.272Macaca_mulatta
ENSRNOG00000018153Rbm510098.160ENSMNEG00000044394RBM510098.160Macaca_nemestrina
ENSRNOG00000018153Rbm510094.479ENSMLEG00000034689RBM510094.479Mandrillus_leucophaeus
ENSRNOG00000018153Rbm510061.001ENSMAMG00000023948-10059.250Mastacembelus_armatus
ENSRNOG00000018153Rbm59176.190ENSMAMG00000017277rbm59976.190Mastacembelus_armatus
ENSRNOG00000018153Rbm510061.494ENSMZEG00005015328rbm510061.260Maylandia_zebra
ENSRNOG00000018153Rbm510057.529ENSMZEG00005010035-10057.683Maylandia_zebra
ENSRNOG00000018153Rbm59387.963ENSMGAG00000003972RBM510087.963Meleagris_gallopavo
ENSRNOG00000018153Rbm59998.765ENSMAUG00000020572Rbm59898.765Mesocricetus_auratus
ENSRNOG00000018153Rbm510098.282ENSMICG00000016179RBM510098.282Microcebus_murinus
ENSRNOG00000018153Rbm510098.528ENSMOCG00000017479Rbm510098.528Microtus_ochrogaster
ENSRNOG00000018153Rbm59951.699ENSMMOG00000021804-9352.727Mola_mola
ENSRNOG00000018153Rbm510094.247ENSMODG00000012301RBM510094.247Monodelphis_domestica
ENSRNOG00000018153Rbm510058.608ENSMALG00000016769-10057.738Monopterus_albus
ENSRNOG00000018153Rbm510099.018MGP_CAROLIEiJ_G0032660Rbm510099.602Mus_caroli
ENSRNOG00000018153Rbm510099.141ENSMUSG00000032580Rbm510099.602Mus_musculus
ENSRNOG00000018153Rbm510099.387MGP_PahariEiJ_G0015528Rbm5100100.000Mus_pahari
ENSRNOG00000018153Rbm510099.264MGP_SPRETEiJ_G0033805Rbm5100100.000Mus_spretus
ENSRNOG00000018153Rbm510097.423ENSMLUG00000007875RBM510097.423Myotis_lucifugus
ENSRNOG00000018153Rbm510099.018ENSNGAG00000011777Rbm510099.018Nannospalax_galili
ENSRNOG00000018153Rbm59658.488ENSNBRG00000004400RBM59558.612Neolamprologus_brichardi
ENSRNOG00000018153Rbm510060.775ENSNBRG00000018097rbm510060.532Neolamprologus_brichardi
ENSRNOG00000018153Rbm510098.160ENSNLEG00000006943RBM510098.160Nomascus_leucogenys
ENSRNOG00000018153Rbm59987.546ENSMEUG00000012994RBM510087.793Notamacropus_eugenii
ENSRNOG00000018153Rbm59394.297ENSOPRG00000015154RBM59394.297Ochotona_princeps
ENSRNOG00000018153Rbm510090.920ENSODEG00000019111-10090.184Octodon_degus
ENSRNOG00000018153Rbm510097.791ENSODEG00000016254-10097.791Octodon_degus
ENSRNOG00000018153Rbm510061.231ENSONIG00000004107rbm510060.995Oreochromis_niloticus
ENSRNOG00000018153Rbm510058.789ENSONIG00000019007RBM510058.432Oreochromis_niloticus
ENSRNOG00000018153Rbm58893.706ENSOANG00000006557RBM510093.147Ornithorhynchus_anatinus
ENSRNOG00000018153Rbm510097.055ENSOCUG00000011652RBM510097.055Oryctolagus_cuniculus
ENSRNOG00000018153Rbm510055.896ENSORLG00000001053-10055.107Oryzias_latipes
ENSRNOG00000018153Rbm59561.172ENSORLG00000003369rbm59960.000Oryzias_latipes
ENSRNOG00000018153Rbm510061.700ENSORLG00020021744rbm510060.702Oryzias_latipes_hni
ENSRNOG00000018153Rbm59554.624ENSORLG00020006782-9853.789Oryzias_latipes_hni
ENSRNOG00000018153Rbm59176.190ENSORLG00015018379rbm59976.190Oryzias_latipes_hsok
ENSRNOG00000018153Rbm59554.827ENSORLG00015002854-9854.332Oryzias_latipes_hsok
ENSRNOG00000018153Rbm56862.500ENSOMEG00000010653-8962.500Oryzias_melastigma
ENSRNOG00000018153Rbm510061.592ENSOMEG00000002219rbm510060.718Oryzias_melastigma
ENSRNOG00000018153Rbm59394.570ENSOGAG00000004205RBM510094.570Otolemur_garnettii
ENSRNOG00000018153Rbm510098.037ENSOARG00000010923RBM510098.037Ovis_aries
ENSRNOG00000018153Rbm510098.282ENSPPAG00000043010RBM510098.282Pan_paniscus
ENSRNOG00000018153Rbm510098.528ENSPPRG00000005404RBM510098.528Panthera_pardus
ENSRNOG00000018153Rbm510098.528ENSPTIG00000000962RBM510098.528Panthera_tigris_altaica
ENSRNOG00000018153Rbm510098.282ENSPTRG00000014946RBM510098.282Pan_troglodytes
ENSRNOG00000018153Rbm510098.282ENSPANG00000018507RBM510098.282Papio_anubis
ENSRNOG00000018153Rbm57657.278ENSPKIG00000019187-10056.962Paramormyrops_kingsleyae
ENSRNOG00000018153Rbm510062.688ENSPKIG00000024837RBM510061.395Paramormyrops_kingsleyae
ENSRNOG00000018153Rbm58888.392ENSPSIG00000016073RBM510088.392Pelodiscus_sinensis
ENSRNOG00000018153Rbm57955.283ENSPMGG00000017347rbm510054.977Periophthalmus_magnuspinnatus
ENSRNOG00000018153Rbm58374.359ENSPMGG00000004719-9973.810Periophthalmus_magnuspinnatus
ENSRNOG00000018153Rbm59946.120ENSPMAG00000001998rbm59245.863Petromyzon_marinus
ENSRNOG00000018153Rbm510094.247ENSPCIG00000021531RBM510094.247Phascolarctos_cinereus
ENSRNOG00000018153Rbm510060.735ENSPLAG00000006318rbm510061.327Poecilia_latipinna
ENSRNOG00000018153Rbm510061.636ENSPMEG00000004295rbm510061.768Poecilia_mexicana
ENSRNOG00000018153Rbm57261.360ENSPMEG00000008651rbm59861.921Poecilia_mexicana
ENSRNOG00000018153Rbm510060.321ENSPREG00000003795rbm510060.690Poecilia_reticulata
ENSRNOG00000018153Rbm57287.500ENSPCAG00000005459RBM58487.500Procavia_capensis
ENSRNOG00000018153Rbm510098.528ENSPCOG00000025840RBM510098.528Propithecus_coquereli
ENSRNOG00000018153Rbm510095.337ENSPVAG00000006812RBM510095.337Pteropus_vampyrus
ENSRNOG00000018153Rbm58358.485ENSPNYG00000006361RBM59957.969Pundamilia_nyererei
ENSRNOG00000018153Rbm510060.775ENSPNYG00000014787rbm510060.532Pundamilia_nyererei
ENSRNOG00000018153Rbm510063.361ENSPNAG00000012070rbm510062.118Pygocentrus_nattereri
ENSRNOG00000018153Rbm510098.037ENSRBIG00000012679RBM510098.037Rhinopithecus_bieti
ENSRNOG00000018153Rbm510098.037ENSRROG00000041331RBM510098.037Rhinopithecus_roxellana
ENSRNOG00000018153Rbm510098.405ENSSBOG00000006324RBM510098.405Saimiri_boliviensis_boliviensis
ENSRNOG00000018153Rbm510094.601ENSSHAG00000018260RBM510094.601Sarcophilus_harrisii
ENSRNOG00000018153Rbm510064.294ENSSFOG00015019052rbm59462.295Scleropages_formosus
ENSRNOG00000018153Rbm510064.269ENSSFOG00015019645-10064.754Scleropages_formosus
ENSRNOG00000018153Rbm510061.450ENSSMAG00000017106rbm510060.844Scophthalmus_maximus
ENSRNOG00000018153Rbm510062.572ENSSDUG00000019775rbm510061.833Seriola_dumerili
ENSRNOG00000018153Rbm510062.616ENSSLDG00000002329rbm510061.833Seriola_lalandi_dorsalis
ENSRNOG00000018153Rbm510060.373ENSSLDG00000015996-10059.814Seriola_lalandi_dorsalis
ENSRNOG00000018153Rbm563100.000ENSSARG00000009724-67100.000Sorex_araneus
ENSRNOG00000018153Rbm510077.278ENSSPUG00000001876RBM58585.337Sphenodon_punctatus
ENSRNOG00000018153Rbm510060.777ENSSPAG00000020011-10060.308Stegastes_partitus
ENSRNOG00000018153Rbm510061.324ENSSPAG00000019638rbm510061.520Stegastes_partitus
ENSRNOG00000018153Rbm510098.037ENSSSCG00000011395RBM510098.037Sus_scrofa
ENSRNOG00000018153Rbm59379.551ENSTGUG00000006417RBM59881.423Taeniopygia_guttata
ENSRNOG00000018153Rbm510061.565ENSTRUG00000008292rbm59867.429Takifugu_rubripes
ENSRNOG00000018153Rbm59946.911ENSTNIG00000014742rbm57863.603Tetraodon_nigroviridis
ENSRNOG00000018153Rbm510090.307ENSTBEG00000005424RBM510090.307Tupaia_belangeri
ENSRNOG00000018153Rbm510090.061ENSTTRG00000007717RBM510091.411Tursiops_truncatus
ENSRNOG00000018153Rbm510098.282ENSUAMG00000028347RBM510098.282Ursus_americanus
ENSRNOG00000018153Rbm510098.282ENSUMAG00000022027RBM510098.282Ursus_maritimus
ENSRNOG00000018153Rbm59097.271ENSVPAG00000009388RBM510097.271Vicugna_pacos
ENSRNOG00000018153Rbm510098.405ENSVVUG00000028647RBM510098.405Vulpes_vulpes
ENSRNOG00000018153Rbm510060.780ENSXMAG00000016369rbm510060.984Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000245spliceosomal complex assembly-ISOProcess
GO:0000245spliceosomal complex assembly-ISSProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISOProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISSProcess
GO:0003729mRNA binding-ISOFunction
GO:0003729mRNA binding-ISSFunction
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005654nucleoplasm-IEAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0006915apoptotic process-IEAProcess
GO:0043065positive regulation of apoptotic process-ISOProcess
GO:0043065positive regulation of apoptotic process-ISSProcess
GO:0046872metal ion binding-IEAFunction

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