EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018238 (Gene tree)
Gene ID: 290325
Gene Symbol: Nuggc
Alias: LOC290325|RGD1562099
Full Name: nuclear GTPase%2C germinal center associated
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 44746 bases
Position: chr15:49010492-49055237
Accession: 1562099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000042169	MMR_HSR1	PF01926.23	6.5e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000024527	-	2736	XM_008769341	ENSRNOP00000042169	796 (aa)	XP_008767563	F1M575

Gene Model

Click here to download ENSRNOG00000018238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018238	Nuggc	99	77.525	ENSCAFG00020012433	-	99	77.525	Canis_lupus_dingo
ENSRNOG00000018238	Nuggc	94	79.813	ENSCSAG00000015949	-	99	79.813	Chlorocebus_sabaeus
ENSRNOG00000018238	Nuggc	84	50.148	ENSCPBG00000016096	-	90	50.297	Chrysemys_picta_bellii
ENSRNOG00000018238	Nuggc	91	46.785	ENSCPBG00000021441	-	90	49.110	Chrysemys_picta_bellii
ENSRNOG00000018238	Nuggc	87	70.950	ENSEEUG00000007630	-	87	70.950	Erinaceus_europaeus
ENSRNOG00000018238	Nuggc	95	41.569	ENSGALG00000045940	-	99	41.307	Gallus_gallus
ENSRNOG00000018238	Nuggc	87	44.936	ENSMGAG00000014117	-	99	44.936	Meleagris_gallopavo
ENSRNOG00000018238	Nuggc	100	88.568	ENSMOCG00000013105	-	100	88.568	Microtus_ochrogaster
ENSRNOG00000018238	Nuggc	100	93.970	MGP_PahariEiJ_G0030444	-	100	93.970	Mus_pahari
ENSRNOG00000018238	Nuggc	99	75.879	ENSMLUG00000013214	-	100	75.879	Myotis_lucifugus
ENSRNOG00000018238	Nuggc	67	50.093	ENSPSIG00000017505	-	96	49.722	Pelodiscus_sinensis
ENSRNOG00000018238	Nuggc	100	90.339	ENSPEMG00000009412	-	100	90.339	Peromyscus_maniculatus_bairdii
ENSRNOG00000018238	Nuggc	99	74.433	ENSPVAG00000007472	-	100	74.433	Pteropus_vampyrus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	ISO	Process
GO:0033262	regulation of nuclear cell cycle DNA replication	-	ISO	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0071222	cellular response to lipopolysaccharide	-	ISO	Process