EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018520 (Gene tree)
Gene ID: 307148
Gene Symbol: Nsun6
Alias: LOC307148|Nopd1
Full Name: NOP2/Sun RNA methyltransferase family member 6
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 37634 bases
Position: chr17:82022490-82060123
Accession: 1309535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025046	Methyltr_RsmB-F	PF01189.17	2.5e-46	1	1
ENSRNOP00000025046	Methyltransf_31	PF13847.6	4.5e-10	1	1
ENSRNOP00000025046	FtsJ	PF01728.19	6.6e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025046	-	2036	XM_008771868	ENSRNOP00000025046	476 (aa)	XP_008770090	B1WC69

Gene Model

Click here to download ENSRNOG00000018520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018520	Nsun6	99	80.171	ENSG00000241058	NSUN6	100	80.171	Homo_sapiens
ENSRNOG00000018520	Nsun6	98	59.362	ENSAPOG00000016126	nsun6	99	59.362	Acanthochromis_polyacanthus
ENSRNOG00000018520	Nsun6	99	81.023	ENSAMEG00000012963	NSUN6	100	81.023	Ailuropoda_melanoleuca
ENSRNOG00000018520	Nsun6	98	60.000	ENSACIG00000016632	nsun6	99	60.000	Amphilophus_citrinellus
ENSRNOG00000018520	Nsun6	98	60.085	ENSAOCG00000020920	nsun6	99	60.085	Amphiprion_ocellaris
ENSRNOG00000018520	Nsun6	98	59.873	ENSAPEG00000015212	nsun6	95	59.873	Amphiprion_percula
ENSRNOG00000018520	Nsun6	98	60.426	ENSATEG00000004585	nsun6	99	60.426	Anabas_testudineus
ENSRNOG00000018520	Nsun6	98	68.602	ENSAPLG00000013473	NSUN6	99	68.602	Anas_platyrhynchos
ENSRNOG00000018520	Nsun6	95	65.784	ENSACAG00000005626	NSUN6	99	65.784	Anolis_carolinensis
ENSRNOG00000018520	Nsun6	99	80.810	ENSANAG00000027899	NSUN6	100	80.810	Aotus_nancymaae
ENSRNOG00000018520	Nsun6	98	59.660	ENSACLG00000000803	nsun6	99	59.660	Astatotilapia_calliptera
ENSRNOG00000018520	Nsun6	97	58.209	ENSAMXG00000010451	nsun6	98	58.209	Astyanax_mexicanus
ENSRNOG00000018520	Nsun6	84	81.704	ENSBTAG00000022003	NSUN6	98	81.704	Bos_taurus
ENSRNOG00000018520	Nsun6	99	81.237	ENSCJAG00000008427	NSUN6	100	81.237	Callithrix_jacchus
ENSRNOG00000018520	Nsun6	99	81.876	ENSCAFG00000004422	NSUN6	100	81.876	Canis_familiaris
ENSRNOG00000018520	Nsun6	99	81.876	ENSCAFG00020012116	NSUN6	100	81.876	Canis_lupus_dingo
ENSRNOG00000018520	Nsun6	99	79.362	ENSCHIG00000012618	NSUN6	100	79.362	Capra_hircus
ENSRNOG00000018520	Nsun6	99	81.023	ENSTSYG00000010744	NSUN6	100	81.023	Carlito_syrichta
ENSRNOG00000018520	Nsun6	93	69.231	ENSCPOG00000022824	-	100	68.750	Cavia_porcellus
ENSRNOG00000018520	Nsun6	89	75.000	ENSCPOG00000005850	-	100	75.000	Cavia_porcellus
ENSRNOG00000018520	Nsun6	99	80.384	ENSCCAG00000036696	NSUN6	100	80.384	Cebus_capucinus
ENSRNOG00000018520	Nsun6	99	80.384	ENSCATG00000038294	NSUN6	100	80.384	Cercocebus_atys
ENSRNOG00000018520	Nsun6	99	79.873	ENSCLAG00000008092	NSUN6	99	79.873	Chinchilla_lanigera
ENSRNOG00000018520	Nsun6	99	80.597	ENSCSAG00000012571	NSUN6	100	80.597	Chlorocebus_sabaeus
ENSRNOG00000018520	Nsun6	64	71.429	ENSCHOG00000006503	-	69	71.429	Choloepus_hoffmanni
ENSRNOG00000018520	Nsun6	98	72.495	ENSCPBG00000015063	NSUN6	99	72.495	Chrysemys_picta_bellii
ENSRNOG00000018520	Nsun6	50	45.122	ENSCING00000017577	-	100	45.122	Ciona_intestinalis
ENSRNOG00000018520	Nsun6	99	80.597	ENSCANG00000033916	NSUN6	100	80.597	Colobus_angolensis_palliatus
ENSRNOG00000018520	Nsun6	100	87.605	ENSCGRG00001023166	Nsun6	100	87.605	Cricetulus_griseus_chok1gshd
ENSRNOG00000018520	Nsun6	100	87.605	ENSCGRG00000016549	Nsun6	100	87.605	Cricetulus_griseus_crigri
ENSRNOG00000018520	Nsun6	98	62.151	ENSCSEG00000000514	nsun6	99	62.151	Cynoglossus_semilaevis
ENSRNOG00000018520	Nsun6	98	59.873	ENSCVAG00000006888	nsun6	99	59.873	Cyprinodon_variegatus
ENSRNOG00000018520	Nsun6	98	57.849	ENSDARG00000103478	nsun6	99	57.849	Danio_rerio
ENSRNOG00000018520	Nsun6	99	78.038	ENSDNOG00000014162	NSUN6	100	78.038	Dasypus_novemcinctus
ENSRNOG00000018520	Nsun6	100	80.042	ENSDORG00000001962	Nsun6	100	80.042	Dipodomys_ordii
ENSRNOG00000018520	Nsun6	95	40.652	FBgn0037200	CG11109	99	40.652	Drosophila_melanogaster
ENSRNOG00000018520	Nsun6	78	86.607	ENSETEG00000020201	NSUN6	79	86.607	Echinops_telfairi
ENSRNOG00000018520	Nsun6	74	57.703	ENSEBUG00000002845	nsun6	92	57.703	Eptatretus_burgeri
ENSRNOG00000018520	Nsun6	99	81.237	ENSEASG00005019939	NSUN6	100	81.237	Equus_asinus_asinus
ENSRNOG00000018520	Nsun6	99	80.810	ENSECAG00000009221	NSUN6	100	80.810	Equus_caballus
ENSRNOG00000018520	Nsun6	99	62.473	ENSEEUG00000008356	NSUN6	100	62.473	Erinaceus_europaeus
ENSRNOG00000018520	Nsun6	98	59.958	ENSELUG00000021983	nsun6	92	59.958	Esox_lucius
ENSRNOG00000018520	Nsun6	96	83.188	ENSFCAG00000015494	NSUN6	84	83.834	Felis_catus
ENSRNOG00000018520	Nsun6	98	71.581	ENSFALG00000007398	NSUN6	99	71.581	Ficedula_albicollis
ENSRNOG00000018520	Nsun6	88	80.048	ENSFDAG00000021538	NSUN6	100	80.048	Fukomys_damarensis
ENSRNOG00000018520	Nsun6	98	60.510	ENSFHEG00000014522	nsun6	99	60.510	Fundulus_heteroclitus
ENSRNOG00000018520	Nsun6	98	58.672	ENSGMOG00000011167	nsun6	100	58.672	Gadus_morhua
ENSRNOG00000018520	Nsun6	98	69.892	ENSGALG00000008564	NSUN6	99	69.892	Gallus_gallus
ENSRNOG00000018520	Nsun6	98	60.426	ENSGAFG00000002703	nsun6	99	60.426	Gambusia_affinis
ENSRNOG00000018520	Nsun6	98	59.110	ENSGACG00000004059	nsun6	99	59.110	Gasterosteus_aculeatus
ENSRNOG00000018520	Nsun6	93	72.748	ENSGAGG00000011440	NSUN6	94	72.748	Gopherus_agassizii
ENSRNOG00000018520	Nsun6	99	80.810	ENSGGOG00000009321	NSUN6	100	80.810	Gorilla_gorilla
ENSRNOG00000018520	Nsun6	98	59.660	ENSHBUG00000009093	nsun6	99	59.660	Haplochromis_burtoni
ENSRNOG00000018520	Nsun6	100	80.042	ENSHGLG00000008085	NSUN6	100	80.042	Heterocephalus_glaber_female
ENSRNOG00000018520	Nsun6	100	80.042	ENSHGLG00100016673	NSUN6	100	80.042	Heterocephalus_glaber_male
ENSRNOG00000018520	Nsun6	98	59.529	ENSHCOG00000015758	nsun6	99	59.529	Hippocampus_comes
ENSRNOG00000018520	Nsun6	97	57.537	ENSIPUG00000006281	nsun6	98	57.537	Ictalurus_punctatus
ENSRNOG00000018520	Nsun6	99	80.932	ENSSTOG00000004317	NSUN6	99	80.932	Ictidomys_tridecemlineatus
ENSRNOG00000018520	Nsun6	99	73.053	ENSJJAG00000001860	Nsun6	100	73.053	Jaculus_jaculus
ENSRNOG00000018520	Nsun6	98	59.701	ENSKMAG00000013611	nsun6	99	59.701	Kryptolebias_marmoratus
ENSRNOG00000018520	Nsun6	98	59.574	ENSLBEG00000017133	nsun6	99	59.574	Labrus_bergylta
ENSRNOG00000018520	Nsun6	98	68.387	ENSLACG00000015374	NSUN6	99	68.387	Latimeria_chalumnae
ENSRNOG00000018520	Nsun6	98	63.924	ENSLOCG00000010862	nsun6	98	63.924	Lepisosteus_oculatus
ENSRNOG00000018520	Nsun6	99	83.582	ENSLAFG00000001485	NSUN6	100	83.582	Loxodonta_africana
ENSRNOG00000018520	Nsun6	99	80.597	ENSMFAG00000045602	NSUN6	100	80.597	Macaca_fascicularis
ENSRNOG00000018520	Nsun6	99	80.171	ENSMMUG00000007451	NSUN6	100	80.171	Macaca_mulatta
ENSRNOG00000018520	Nsun6	99	80.384	ENSMNEG00000045340	NSUN6	100	80.384	Macaca_nemestrina
ENSRNOG00000018520	Nsun6	99	80.384	ENSMLEG00000032035	NSUN6	100	80.384	Mandrillus_leucophaeus
ENSRNOG00000018520	Nsun6	98	59.236	ENSMAMG00000004915	nsun6	99	59.236	Mastacembelus_armatus
ENSRNOG00000018520	Nsun6	98	59.660	ENSMZEG00005000999	nsun6	99	59.660	Maylandia_zebra
ENSRNOG00000018520	Nsun6	100	69.118	ENSMGAG00000007427	NSUN6	100	69.118	Meleagris_gallopavo
ENSRNOG00000018520	Nsun6	100	88.866	ENSMAUG00000016025	Nsun6	100	88.866	Mesocricetus_auratus
ENSRNOG00000018520	Nsun6	99	82.090	ENSMICG00000029435	NSUN6	100	82.090	Microcebus_murinus
ENSRNOG00000018520	Nsun6	99	88.608	ENSMOCG00000009814	Nsun6	99	88.608	Microtus_ochrogaster
ENSRNOG00000018520	Nsun6	98	59.355	ENSMMOG00000004263	nsun6	99	59.355	Mola_mola
ENSRNOG00000018520	Nsun6	98	77.137	ENSMODG00000009471	NSUN6	99	77.137	Monodelphis_domestica
ENSRNOG00000018520	Nsun6	98	59.362	ENSMALG00000020340	nsun6	99	59.362	Monopterus_albus
ENSRNOG00000018520	Nsun6	100	91.387	MGP_CAROLIEiJ_G0023196	Nsun6	100	91.387	Mus_caroli
ENSRNOG00000018520	Nsun6	100	91.387	ENSMUSG00000026707	Nsun6	100	91.387	Mus_musculus
ENSRNOG00000018520	Nsun6	99	82.729	ENSMPUG00000011900	NSUN6	100	82.729	Mustela_putorius_furo
ENSRNOG00000018520	Nsun6	100	81.303	ENSMLUG00000001824	NSUN6	100	81.303	Myotis_lucifugus
ENSRNOG00000018520	Nsun6	100	82.563	ENSNGAG00000004582	Nsun6	100	82.563	Nannospalax_galili
ENSRNOG00000018520	Nsun6	99	80.597	ENSNLEG00000012680	NSUN6	100	80.597	Nomascus_leucogenys
ENSRNOG00000018520	Nsun6	93	55.756	ENSMEUG00000005251	NSUN6	99	55.756	Notamacropus_eugenii
ENSRNOG00000018520	Nsun6	99	56.716	ENSOPRG00000006008	-	100	56.716	Ochotona_princeps
ENSRNOG00000018520	Nsun6	89	81.925	ENSODEG00000010093	NSUN6	99	81.925	Octodon_degus
ENSRNOG00000018520	Nsun6	98	59.705	ENSONIG00000006038	nsun6	99	59.705	Oreochromis_niloticus
ENSRNOG00000018520	Nsun6	98	70.968	ENSOANG00000005705	NSUN6	95	70.968	Ornithorhynchus_anatinus
ENSRNOG00000018520	Nsun6	99	82.241	ENSOCUG00000014870	NSUN6	79	82.241	Oryctolagus_cuniculus
ENSRNOG00000018520	Nsun6	98	59.615	ENSORLG00000010870	nsun6	99	59.615	Oryzias_latipes
ENSRNOG00000018520	Nsun6	98	59.829	ENSORLG00020009913	nsun6	99	59.829	Oryzias_latipes_hni
ENSRNOG00000018520	Nsun6	98	59.829	ENSORLG00015009893	nsun6	99	59.829	Oryzias_latipes_hsok
ENSRNOG00000018520	Nsun6	98	59.236	ENSOMEG00000003613	nsun6	99	59.236	Oryzias_melastigma
ENSRNOG00000018520	Nsun6	98	79.025	ENSOGAG00000003925	NSUN6	100	79.025	Otolemur_garnettii
ENSRNOG00000018520	Nsun6	100	78.992	ENSOARG00000013212	NSUN6	100	78.992	Ovis_aries
ENSRNOG00000018520	Nsun6	99	79.957	ENSPPAG00000042405	NSUN6	100	79.957	Pan_paniscus
ENSRNOG00000018520	Nsun6	99	82.942	ENSPPRG00000007015	NSUN6	100	82.942	Panthera_pardus
ENSRNOG00000018520	Nsun6	99	82.516	ENSPTIG00000010890	NSUN6	100	82.516	Panthera_tigris_altaica
ENSRNOG00000018520	Nsun6	99	76.972	ENSPTRG00000002340	NSUN6	100	76.972	Pan_troglodytes
ENSRNOG00000018520	Nsun6	99	80.384	ENSPANG00000023143	NSUN6	100	80.384	Papio_anubis
ENSRNOG00000018520	Nsun6	97	60.043	ENSPKIG00000011356	nsun6	96	60.043	Paramormyrops_kingsleyae
ENSRNOG00000018520	Nsun6	98	69.936	ENSPSIG00000014756	NSUN6	99	69.936	Pelodiscus_sinensis
ENSRNOG00000018520	Nsun6	98	59.957	ENSPMGG00000002869	nsun6	99	59.957	Periophthalmus_magnuspinnatus
ENSRNOG00000018520	Nsun6	100	88.025	ENSPEMG00000023389	Nsun6	100	88.025	Peromyscus_maniculatus_bairdii
ENSRNOG00000018520	Nsun6	97	50.106	ENSPMAG00000003159	nsun6	98	50.106	Petromyzon_marinus
ENSRNOG00000018520	Nsun6	98	76.907	ENSPCIG00000008953	NSUN6	99	76.907	Phascolarctos_cinereus
ENSRNOG00000018520	Nsun6	98	61.489	ENSPFOG00000016647	nsun6	99	61.489	Poecilia_formosa
ENSRNOG00000018520	Nsun6	98	61.277	ENSPLAG00000021785	nsun6	99	61.277	Poecilia_latipinna
ENSRNOG00000018520	Nsun6	98	61.489	ENSPMEG00000022256	nsun6	99	61.489	Poecilia_mexicana
ENSRNOG00000018520	Nsun6	98	60.128	ENSPREG00000008237	nsun6	99	60.128	Poecilia_reticulata
ENSRNOG00000018520	Nsun6	99	76.759	ENSPPYG00000002131	NSUN6	100	76.759	Pongo_abelii
ENSRNOG00000018520	Nsun6	59	83.333	ENSPCAG00000014335	-	65	72.093	Procavia_capensis
ENSRNOG00000018520	Nsun6	99	65.745	ENSPCOG00000004346	NSUN6	100	65.745	Propithecus_coquereli
ENSRNOG00000018520	Nsun6	80	84.375	ENSPVAG00000006329	NSUN6	81	84.375	Pteropus_vampyrus
ENSRNOG00000018520	Nsun6	98	60.171	ENSPNYG00000000646	nsun6	99	60.171	Pundamilia_nyererei
ENSRNOG00000018520	Nsun6	98	58.686	ENSPNAG00000000807	nsun6	99	58.686	Pygocentrus_nattereri
ENSRNOG00000018520	Nsun6	99	80.597	ENSRBIG00000033358	NSUN6	100	80.597	Rhinopithecus_bieti
ENSRNOG00000018520	Nsun6	99	80.597	ENSRROG00000033711	NSUN6	100	80.597	Rhinopithecus_roxellana
ENSRNOG00000018520	Nsun6	99	73.561	ENSSBOG00000036167	NSUN6	100	73.561	Saimiri_boliviensis_boliviensis
ENSRNOG00000018520	Nsun6	99	76.972	ENSSHAG00000008315	NSUN6	100	76.972	Sarcophilus_harrisii
ENSRNOG00000018520	Nsun6	98	59.544	ENSSFOG00015001941	nsun6	99	59.544	Scleropages_formosus
ENSRNOG00000018520	Nsun6	98	59.873	ENSSMAG00000011608	nsun6	99	59.873	Scophthalmus_maximus
ENSRNOG00000018520	Nsun6	98	62.128	ENSSDUG00000007541	nsun6	99	62.128	Seriola_dumerili
ENSRNOG00000018520	Nsun6	98	61.915	ENSSLDG00000021347	nsun6	99	61.915	Seriola_lalandi_dorsalis
ENSRNOG00000018520	Nsun6	82	76.970	ENSSARG00000013595	NSUN6	83	76.970	Sorex_araneus
ENSRNOG00000018520	Nsun6	96	68.928	ENSSPUG00000014085	NSUN6	98	68.928	Sphenodon_punctatus
ENSRNOG00000018520	Nsun6	98	59.534	ENSSPAG00000012441	nsun6	99	59.534	Stegastes_partitus
ENSRNOG00000018520	Nsun6	99	81.356	ENSSSCG00000011041	NSUN6	99	81.356	Sus_scrofa
ENSRNOG00000018520	Nsun6	98	71.795	ENSTGUG00000001241	NSUN6	99	71.795	Taeniopygia_guttata
ENSRNOG00000018520	Nsun6	98	52.842	ENSTRUG00000008314	nsun6	99	52.842	Takifugu_rubripes
ENSRNOG00000018520	Nsun6	83	64.631	ENSTBEG00000010815	NSUN6	100	64.631	Tupaia_belangeri
ENSRNOG00000018520	Nsun6	98	82.013	ENSTTRG00000007423	NSUN6	99	82.013	Tursiops_truncatus
ENSRNOG00000018520	Nsun6	99	81.237	ENSUMAG00000013383	NSUN6	100	81.237	Ursus_maritimus
ENSRNOG00000018520	Nsun6	73	69.231	ENSVPAG00000010144	NSUN6	79	69.231	Vicugna_pacos
ENSRNOG00000018520	Nsun6	99	81.663	ENSVVUG00000003814	NSUN6	100	81.663	Vulpes_vulpes
ENSRNOG00000018520	Nsun6	99	66.949	ENSXETG00000022762	nsun6	100	67.308	Xenopus_tropicalis
ENSRNOG00000018520	Nsun6	98	60.341	ENSXCOG00000011542	nsun6	99	60.341	Xiphophorus_couchianus
ENSRNOG00000018520	Nsun6	98	61.277	ENSXMAG00000002289	nsun6	99	61.277	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0000049	tRNA binding	-	ISO	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	-	IEA	Function
GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	-	ISO	Function
GO:0030488	tRNA methylation	-	IEA	Process