EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018531 (Gene tree)
Gene ID: 499185
Gene Symbol: Mrps11
Alias: LOC499185|RGD1559901
Full Name: mitochondrial ribosomal protein S11
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9381 bases
Position: chr1:140477868-140487248
Accession: 1559901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025007	Ribosomal_S11	PF00411.19	2.2e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025008	-	892	XM_006229400	ENSRNOP00000025007	191 (aa)	XP_006229462	D4A040

Gene Model

Click here to download ENSRNOG00000018531's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000018531	Mrps11	100	91.667	ENSRNOG00000003080	AABR07021945.1	100	91.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018531	Mrps11	100	74.227	ENSG00000181991	MRPS11	100	74.227	Homo_sapiens
ENSRNOG00000018531	Mrps11	85	66.049	ENSAPOG00000018727	mrps11	81	66.049	Acanthochromis_polyacanthus
ENSRNOG00000018531	Mrps11	100	77.665	ENSAMEG00000012776	MRPS11	100	77.665	Ailuropoda_melanoleuca
ENSRNOG00000018531	Mrps11	79	67.742	ENSACIG00000007679	mrps11	97	67.742	Amphilophus_citrinellus
ENSRNOG00000018531	Mrps11	76	72.297	ENSAOCG00000000916	mrps11	65	70.513	Amphiprion_ocellaris
ENSRNOG00000018531	Mrps11	76	72.297	ENSAPEG00000006598	mrps11	76	72.297	Amphiprion_percula
ENSRNOG00000018531	Mrps11	84	65.839	ENSATEG00000005662	mrps11	81	65.839	Anabas_testudineus
ENSRNOG00000018531	Mrps11	64	77.049	ENSAPLG00000012913	MRPS11	88	63.804	Anas_platyrhynchos
ENSRNOG00000018531	Mrps11	85	70.122	ENSACAG00000005360	MRPS11	95	66.667	Anolis_carolinensis
ENSRNOG00000018531	Mrps11	100	75.773	ENSANAG00000035828	MRPS11	100	75.773	Aotus_nancymaae
ENSRNOG00000018531	Mrps11	78	68.831	ENSACLG00000019910	mrps11	81	68.831	Astatotilapia_calliptera
ENSRNOG00000018531	Mrps11	82	63.804	ENSAMXG00000021547	mrps11	79	63.804	Astyanax_mexicanus
ENSRNOG00000018531	Mrps11	100	76.650	ENSBTAG00000019831	MRPS11	100	76.650	Bos_taurus
ENSRNOG00000018531	Mrps11	70	43.704	WBGene00012244	mrps-11	68	42.254	Caenorhabditis_elegans
ENSRNOG00000018531	Mrps11	100	75.773	ENSCJAG00000013012	MRPS11	100	75.773	Callithrix_jacchus
ENSRNOG00000018531	Mrps11	100	77.041	ENSCAFG00000011502	MRPS11	100	77.041	Canis_familiaris
ENSRNOG00000018531	Mrps11	100	77.551	ENSCAFG00020018868	MRPS11	100	77.551	Canis_lupus_dingo
ENSRNOG00000018531	Mrps11	100	78.680	ENSCHIG00000022002	MRPS11	100	78.680	Capra_hircus
ENSRNOG00000018531	Mrps11	100	77.835	ENSTSYG00000011176	MRPS11	100	77.835	Carlito_syrichta
ENSRNOG00000018531	Mrps11	70	90.977	ENSCAPG00000012155	MRPS11	100	90.977	Cavia_aperea
ENSRNOG00000018531	Mrps11	100	78.646	ENSCPOG00000014489	MRPS11	100	78.646	Cavia_porcellus
ENSRNOG00000018531	Mrps11	100	73.333	ENSCCAG00000031468	-	100	73.333	Cebus_capucinus
ENSRNOG00000018531	Mrps11	99	67.876	ENSCCAG00000021347	-	95	67.876	Cebus_capucinus
ENSRNOG00000018531	Mrps11	100	78.866	ENSCATG00000016716	MRPS11	100	78.866	Cercocebus_atys
ENSRNOG00000018531	Mrps11	100	78.125	ENSCLAG00000017346	MRPS11	100	78.125	Chinchilla_lanigera
ENSRNOG00000018531	Mrps11	100	78.866	ENSCSAG00000017199	MRPS11	100	78.866	Chlorocebus_sabaeus
ENSRNOG00000018531	Mrps11	100	77.949	ENSCHOG00000009121	MRPS11	99	75.385	Choloepus_hoffmanni
ENSRNOG00000018531	Mrps11	95	64.362	ENSCPBG00000017906	MRPS11	75	64.362	Chrysemys_picta_bellii
ENSRNOG00000018531	Mrps11	100	78.351	ENSCANG00000037910	MRPS11	100	78.351	Colobus_angolensis_palliatus
ENSRNOG00000018531	Mrps11	100	87.435	ENSCGRG00001012765	Mrps11	100	87.435	Cricetulus_griseus_chok1gshd
ENSRNOG00000018531	Mrps11	100	87.435	ENSCGRG00000004167	Mrps11	100	87.435	Cricetulus_griseus_crigri
ENSRNOG00000018531	Mrps11	99	56.085	ENSCSEG00000010615	mrps11	97	56.085	Cynoglossus_semilaevis
ENSRNOG00000018531	Mrps11	70	76.866	ENSCVAG00000013577	mrps11	74	76.866	Cyprinodon_variegatus
ENSRNOG00000018531	Mrps11	99	57.292	ENSDARG00000075129	mrps11	96	57.292	Danio_rerio
ENSRNOG00000018531	Mrps11	85	80.000	ENSDNOG00000005258	MRPS11	85	80.000	Dasypus_novemcinctus
ENSRNOG00000018531	Mrps11	70	88.722	ENSDORG00000024352	Mrps11	100	88.722	Dipodomys_ordii
ENSRNOG00000018531	Mrps11	88	40.237	FBgn0038474	mRpS11	80	40.237	Drosophila_melanogaster
ENSRNOG00000018531	Mrps11	82	54.321	ENSEBUG00000010376	mrps11	78	60.000	Eptatretus_burgeri
ENSRNOG00000018531	Mrps11	100	79.487	ENSEASG00005015369	MRPS11	100	79.487	Equus_asinus_asinus
ENSRNOG00000018531	Mrps11	100	79.487	ENSECAG00000007319	MRPS11	100	79.487	Equus_caballus
ENSRNOG00000018531	Mrps11	86	64.848	ENSELUG00000016452	mrps11	86	72.388	Esox_lucius
ENSRNOG00000018531	Mrps11	100	78.680	ENSFCAG00000014967	MRPS11	100	78.680	Felis_catus
ENSRNOG00000018531	Mrps11	85	62.577	ENSFALG00000010437	MRPS11	98	63.636	Ficedula_albicollis
ENSRNOG00000018531	Mrps11	100	77.083	ENSFDAG00000018915	MRPS11	100	77.083	Fukomys_damarensis
ENSRNOG00000018531	Mrps11	80	69.935	ENSFHEG00000001310	mrps11	78	69.935	Fundulus_heteroclitus
ENSRNOG00000018531	Mrps11	70	73.134	ENSGMOG00000018625	mrps11	100	73.134	Gadus_morhua
ENSRNOG00000018531	Mrps11	85	66.667	ENSGALG00000006777	MRPS11	88	66.667	Gallus_gallus
ENSRNOG00000018531	Mrps11	78	70.667	ENSGAFG00000001720	mrps11	77	70.667	Gambusia_affinis
ENSRNOG00000018531	Mrps11	70	77.444	ENSGACG00000014791	mrps11	99	77.444	Gasterosteus_aculeatus
ENSRNOG00000018531	Mrps11	85	71.006	ENSGAGG00000013556	MRPS11	87	71.006	Gopherus_agassizii
ENSRNOG00000018531	Mrps11	100	74.742	ENSGGOG00000015152	MRPS11	100	74.742	Gorilla_gorilla
ENSRNOG00000018531	Mrps11	78	68.182	ENSHBUG00000019804	mrps11	85	68.182	Haplochromis_burtoni
ENSRNOG00000018531	Mrps11	100	78.646	ENSHGLG00000007732	MRPS11	100	78.646	Heterocephalus_glaber_female
ENSRNOG00000018531	Mrps11	100	78.646	ENSHGLG00100010255	MRPS11	100	78.646	Heterocephalus_glaber_male
ENSRNOG00000018531	Mrps11	69	70.677	ENSHCOG00000001347	mrps11	83	69.925	Hippocampus_comes
ENSRNOG00000018531	Mrps11	85	64.671	ENSIPUG00000022494	MRPS11	83	64.671	Ictalurus_punctatus
ENSRNOG00000018531	Mrps11	84	81.875	ENSSTOG00000021237	MRPS11	98	81.875	Ictidomys_tridecemlineatus
ENSRNOG00000018531	Mrps11	100	77.157	ENSJJAG00000000570	Mrps11	100	76.650	Jaculus_jaculus
ENSRNOG00000018531	Mrps11	99	59.391	ENSKMAG00000000890	mrps11	97	59.391	Kryptolebias_marmoratus
ENSRNOG00000018531	Mrps11	99	59.474	ENSLBEG00000023307	mrps11	98	59.474	Labrus_bergylta
ENSRNOG00000018531	Mrps11	96	60.753	ENSLACG00000007480	MRPS11	93	60.753	Latimeria_chalumnae
ENSRNOG00000018531	Mrps11	93	62.366	ENSLOCG00000014531	mrps11	92	62.366	Lepisosteus_oculatus
ENSRNOG00000018531	Mrps11	100	72.917	ENSLAFG00000030086	MRPS11	100	74.611	Loxodonta_africana
ENSRNOG00000018531	Mrps11	100	79.381	ENSMFAG00000001006	MRPS11	100	79.381	Macaca_fascicularis
ENSRNOG00000018531	Mrps11	100	79.381	ENSMMUG00000013659	MRPS11	100	79.381	Macaca_mulatta
ENSRNOG00000018531	Mrps11	100	79.381	ENSMNEG00000039978	MRPS11	100	79.381	Macaca_nemestrina
ENSRNOG00000018531	Mrps11	100	78.351	ENSMLEG00000037050	MRPS11	100	78.351	Mandrillus_leucophaeus
ENSRNOG00000018531	Mrps11	86	64.634	ENSMAMG00000006581	mrps11	84	64.634	Mastacembelus_armatus
ENSRNOG00000018531	Mrps11	78	68.831	ENSMZEG00005005157	mrps11	76	68.831	Maylandia_zebra
ENSRNOG00000018531	Mrps11	85	65.432	ENSMGAG00000008763	MRPS11	97	65.432	Meleagris_gallopavo
ENSRNOG00000018531	Mrps11	100	89.005	ENSMAUG00000006622	Mrps11	100	89.005	Mesocricetus_auratus
ENSRNOG00000018531	Mrps11	100	79.897	ENSMICG00000015830	MRPS11	100	79.897	Microcebus_murinus
ENSRNOG00000018531	Mrps11	100	86.911	ENSMOCG00000020525	Mrps11	100	86.911	Microtus_ochrogaster
ENSRNOG00000018531	Mrps11	69	71.212	ENSMMOG00000015779	mrps11	86	71.212	Mola_mola
ENSRNOG00000018531	Mrps11	94	67.021	ENSMODG00000019589	MRPS11	93	67.742	Monodelphis_domestica
ENSRNOG00000018531	Mrps11	79	69.677	ENSMALG00000012248	mrps11	75	71.812	Monopterus_albus
ENSRNOG00000018531	Mrps11	100	95.288	MGP_CAROLIEiJ_G0029870	Mrps11	100	95.288	Mus_caroli
ENSRNOG00000018531	Mrps11	100	94.241	ENSMUSG00000030611	Mrps11	100	94.241	Mus_musculus
ENSRNOG00000018531	Mrps11	100	95.288	MGP_PahariEiJ_G0013092	Mrps11	100	95.288	Mus_pahari
ENSRNOG00000018531	Mrps11	100	93.717	MGP_SPRETEiJ_G0030972	Mrps11	100	93.717	Mus_spretus
ENSRNOG00000018531	Mrps11	100	77.551	ENSMPUG00000015823	MRPS11	100	77.551	Mustela_putorius_furo
ENSRNOG00000018531	Mrps11	100	49.254	ENSMLUG00000009637	MRPS11	100	51.741	Myotis_lucifugus
ENSRNOG00000018531	Mrps11	100	83.246	ENSNGAG00000010433	Mrps11	100	83.246	Nannospalax_galili
ENSRNOG00000018531	Mrps11	78	68.831	ENSNBRG00000006581	mrps11	79	68.831	Neolamprologus_brichardi
ENSRNOG00000018531	Mrps11	100	76.289	ENSNLEG00000034839	MRPS11	100	76.289	Nomascus_leucogenys
ENSRNOG00000018531	Mrps11	70	87.970	ENSOPRG00000008247	MRPS11	82	87.970	Ochotona_princeps
ENSRNOG00000018531	Mrps11	100	75.000	ENSODEG00000014618	MRPS11	100	75.000	Octodon_degus
ENSRNOG00000018531	Mrps11	79	68.387	ENSONIG00000003016	mrps11	73	68.387	Oreochromis_niloticus
ENSRNOG00000018531	Mrps11	70	84.211	ENSOANG00000015559	MRPS11	85	84.211	Ornithorhynchus_anatinus
ENSRNOG00000018531	Mrps11	100	72.308	ENSOCUG00000025921	MRPS11	100	74.346	Oryctolagus_cuniculus
ENSRNOG00000018531	Mrps11	85	68.519	ENSORLG00000014573	mrps11	81	68.519	Oryzias_latipes
ENSRNOG00000018531	Mrps11	85	67.901	ENSORLG00020019097	mrps11	81	67.901	Oryzias_latipes_hni
ENSRNOG00000018531	Mrps11	85	67.284	ENSORLG00015017121	mrps11	81	67.284	Oryzias_latipes_hsok
ENSRNOG00000018531	Mrps11	85	69.136	ENSOMEG00000017915	mrps11	81	69.136	Oryzias_melastigma
ENSRNOG00000018531	Mrps11	89	78.613	ENSOGAG00000004739	MRPS11	100	78.613	Otolemur_garnettii
ENSRNOG00000018531	Mrps11	100	78.283	ENSOARG00000010899	MRPS11	100	78.283	Ovis_aries
ENSRNOG00000018531	Mrps11	100	74.742	ENSPPAG00000028073	MRPS11	100	74.742	Pan_paniscus
ENSRNOG00000018531	Mrps11	100	79.188	ENSPPRG00000001535	MRPS11	100	79.188	Panthera_pardus
ENSRNOG00000018531	Mrps11	100	78.680	ENSPTIG00000020641	MRPS11	100	78.680	Panthera_tigris_altaica
ENSRNOG00000018531	Mrps11	100	74.742	ENSPTRG00000007420	MRPS11	100	74.742	Pan_troglodytes
ENSRNOG00000018531	Mrps11	100	78.866	ENSPANG00000011753	MRPS11	100	78.866	Papio_anubis
ENSRNOG00000018531	Mrps11	61	63.415	ENSPKIG00000014626	-	64	58.400	Paramormyrops_kingsleyae
ENSRNOG00000018531	Mrps11	85	68.639	ENSPSIG00000014576	MRPS11	82	68.639	Pelodiscus_sinensis
ENSRNOG00000018531	Mrps11	96	61.290	ENSPMGG00000023147	mrps11	90	61.290	Periophthalmus_magnuspinnatus
ENSRNOG00000018531	Mrps11	100	88.482	ENSPEMG00000012996	Mrps11	100	88.482	Peromyscus_maniculatus_bairdii
ENSRNOG00000018531	Mrps11	100	58.639	ENSPMAG00000008136	mrps11	100	58.639	Petromyzon_marinus
ENSRNOG00000018531	Mrps11	79	70.667	ENSPFOG00000017576	mrps11	77	70.667	Poecilia_formosa
ENSRNOG00000018531	Mrps11	79	70.667	ENSPLAG00000016343	mrps11	77	70.667	Poecilia_latipinna
ENSRNOG00000018531	Mrps11	79	70.667	ENSPMEG00000003695	mrps11	77	70.667	Poecilia_mexicana
ENSRNOG00000018531	Mrps11	79	68.667	ENSPREG00000004767	mrps11	77	68.667	Poecilia_reticulata
ENSRNOG00000018531	Mrps11	100	74.742	ENSPPYG00000006751	MRPS11	100	74.742	Pongo_abelii
ENSRNOG00000018531	Mrps11	100	54.359	ENSPCAG00000003032	MRPS11	100	54.359	Procavia_capensis
ENSRNOG00000018531	Mrps11	100	76.289	ENSPCOG00000019243	MRPS11	100	76.289	Propithecus_coquereli
ENSRNOG00000018531	Mrps11	100	78.392	ENSPVAG00000001594	MRPS11	100	78.392	Pteropus_vampyrus
ENSRNOG00000018531	Mrps11	78	68.182	ENSPNYG00000008428	mrps11	79	68.182	Pundamilia_nyererei
ENSRNOG00000018531	Mrps11	71	75.556	ENSPNAG00000002759	mrps11	71	75.556	Pygocentrus_nattereri
ENSRNOG00000018531	Mrps11	100	80.412	ENSRBIG00000035902	MRPS11	100	80.412	Rhinopithecus_bieti
ENSRNOG00000018531	Mrps11	100	80.412	ENSRROG00000032838	MRPS11	100	80.412	Rhinopithecus_roxellana
ENSRNOG00000018531	Mrps11	100	76.804	ENSSBOG00000032874	MRPS11	100	76.804	Saimiri_boliviensis_boliviensis
ENSRNOG00000018531	Mrps11	55	78.095	ENSSHAG00000000058	-	83	78.095	Sarcophilus_harrisii
ENSRNOG00000018531	Mrps11	82	68.790	ENSSFOG00015023615	mrps11	76	68.790	Scleropages_formosus
ENSRNOG00000018531	Mrps11	97	58.602	ENSSMAG00000010954	mrps11	94	58.602	Scophthalmus_maximus
ENSRNOG00000018531	Mrps11	98	62.234	ENSSDUG00000008450	mrps11	99	61.290	Seriola_dumerili
ENSRNOG00000018531	Mrps11	84	67.081	ENSSLDG00000015652	mrps11	81	67.081	Seriola_lalandi_dorsalis
ENSRNOG00000018531	Mrps11	85	66.667	ENSSPUG00000012009	MRPS11	91	66.667	Sphenodon_punctatus
ENSRNOG00000018531	Mrps11	82	66.250	ENSSPAG00000017107	mrps11	83	66.250	Stegastes_partitus
ENSRNOG00000018531	Mrps11	100	78.061	ENSSSCG00000037343	MRPS11	100	77.551	Sus_scrofa
ENSRNOG00000018531	Mrps11	66	75.397	ENSTGUG00000008345	MRPS11	97	75.397	Taeniopygia_guttata
ENSRNOG00000018531	Mrps11	97	62.234	ENSTRUG00000020346	mrps11	95	62.234	Takifugu_rubripes
ENSRNOG00000018531	Mrps11	85	69.325	ENSTNIG00000011909	mrps11	75	69.325	Tetraodon_nigroviridis
ENSRNOG00000018531	Mrps11	89	75.287	ENSTTRG00000008703	MRPS11	100	75.287	Tursiops_truncatus
ENSRNOG00000018531	Mrps11	100	77.551	ENSUAMG00000019059	MRPS11	100	77.551	Ursus_americanus
ENSRNOG00000018531	Mrps11	100	78.756	ENSUMAG00000006261	MRPS11	100	78.756	Ursus_maritimus
ENSRNOG00000018531	Mrps11	81	56.522	ENSVPAG00000004713	-	99	56.522	Vicugna_pacos
ENSRNOG00000018531	Mrps11	100	78.061	ENSVVUG00000012046	-	100	78.061	Vulpes_vulpes
ENSRNOG00000018531	Mrps11	88	65.116	ENSXETG00000007593	mrps11	88	65.116	Xenopus_tropicalis
ENSRNOG00000018531	Mrps11	79	72.000	ENSXCOG00000018085	mrps11	93	72.000	Xiphophorus_couchianus
ENSRNOG00000018531	Mrps11	77	73.154	ENSXMAG00000011607	mrps11	77	73.154	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0048027	mRNA 5'-UTR binding	21873635.	IBA	Function
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function