EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018549 (Gene tree)
Gene ID: 291293
Gene Symbol: Fbh1
Alias: Fbxo18|LOC291293
Full Name: F-box DNA helicase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 38096 bases
Position: chr17:70399049-70437144
Accession: 1306298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025228	UvrD-helicase	PF00580.21	8.2e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025228	-	3576	XM_006254200	ENSRNOP00000025228	1042 (aa)	XP_006254262	F1M298

Gene Model

Click here to download ENSRNOG00000018549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018549	Fbh1	100	89.675	ENSG00000134452	FBH1	100	89.675	Homo_sapiens
ENSRNOG00000018549	Fbh1	97	42.155	ENSAPOG00000007042	fbxo18	97	42.060	Acanthochromis_polyacanthus
ENSRNOG00000018549	Fbh1	100	88.145	ENSAMEG00000002043	FBH1	99	88.145	Ailuropoda_melanoleuca
ENSRNOG00000018549	Fbh1	82	45.496	ENSACIG00000006171	fbxo18	85	45.486	Amphilophus_citrinellus
ENSRNOG00000018549	Fbh1	82	45.444	ENSAOCG00000014826	fbxo18	99	40.533	Amphiprion_ocellaris
ENSRNOG00000018549	Fbh1	82	45.444	ENSAPEG00000022846	fbxo18	99	40.642	Amphiprion_percula
ENSRNOG00000018549	Fbh1	82	46.854	ENSATEG00000004547	fbxo18	99	41.421	Anabas_testudineus
ENSRNOG00000018549	Fbh1	97	48.696	ENSAPLG00000009754	FBH1	99	48.696	Anas_platyrhynchos
ENSRNOG00000018549	Fbh1	84	53.898	ENSACAG00000002729	FBH1	84	53.898	Anolis_carolinensis
ENSRNOG00000018549	Fbh1	100	89.962	ENSANAG00000032436	FBH1	100	89.962	Aotus_nancymaae
ENSRNOG00000018549	Fbh1	88	46.377	ENSACLG00000004266	fbxo18	99	41.516	Astatotilapia_calliptera
ENSRNOG00000018549	Fbh1	72	52.264	ENSAMXG00000020772	fbxo18	99	46.414	Astyanax_mexicanus
ENSRNOG00000018549	Fbh1	100	87.189	ENSBTAG00000004147	FBH1	100	87.189	Bos_taurus
ENSRNOG00000018549	Fbh1	100	89.866	ENSCJAG00000020531	FBH1	100	89.866	Callithrix_jacchus
ENSRNOG00000018549	Fbh1	93	90.226	ENSCAFG00000005218	FBH1	100	90.226	Canis_familiaris
ENSRNOG00000018549	Fbh1	93	90.226	ENSCAFG00020005396	FBH1	100	90.226	Canis_lupus_dingo
ENSRNOG00000018549	Fbh1	100	86.998	ENSCHIG00000016303	FBH1	100	86.998	Capra_hircus
ENSRNOG00000018549	Fbh1	100	84.321	ENSCPOG00000010580	FBH1	100	84.321	Cavia_porcellus
ENSRNOG00000018549	Fbh1	100	89.675	ENSCCAG00000023218	FBH1	100	89.675	Cebus_capucinus
ENSRNOG00000018549	Fbh1	100	77.364	ENSCATG00000035430	FBH1	100	91.684	Cercocebus_atys
ENSRNOG00000018549	Fbh1	100	90.057	ENSCLAG00000008089	FBH1	100	90.057	Chinchilla_lanigera
ENSRNOG00000018549	Fbh1	93	91.152	ENSCSAG00000013644	FBH1	100	91.152	Chlorocebus_sabaeus
ENSRNOG00000018549	Fbh1	71	91.000	ENSCHOG00000007603	FBH1	69	91.000	Choloepus_hoffmanni
ENSRNOG00000018549	Fbh1	100	53.882	ENSCPBG00000019260	FBH1	100	52.906	Chrysemys_picta_bellii
ENSRNOG00000018549	Fbh1	99	89.952	ENSCANG00000023461	FBH1	100	89.952	Colobus_angolensis_palliatus
ENSRNOG00000018549	Fbh1	100	93.881	ENSCGRG00001018795	Fbh1	100	93.881	Cricetulus_griseus_chok1gshd
ENSRNOG00000018549	Fbh1	100	93.881	ENSCGRG00000008471	Fbh1	100	93.881	Cricetulus_griseus_crigri
ENSRNOG00000018549	Fbh1	82	42.647	ENSCSEG00000018212	fbxo18	96	41.314	Cynoglossus_semilaevis
ENSRNOG00000018549	Fbh1	83	40.044	ENSCVAG00000006828	fbxo18	99	39.890	Cyprinodon_variegatus
ENSRNOG00000018549	Fbh1	99	46.344	ENSDARG00000062983	fbxo18	99	46.571	Danio_rerio
ENSRNOG00000018549	Fbh1	100	85.660	ENSETEG00000019856	FBH1	99	85.660	Echinops_telfairi
ENSRNOG00000018549	Fbh1	100	89.293	ENSEASG00005019192	FBH1	100	89.293	Equus_asinus_asinus
ENSRNOG00000018549	Fbh1	100	89.101	ENSECAG00000006839	FBH1	100	89.101	Equus_caballus
ENSRNOG00000018549	Fbh1	86	85.227	ENSEEUG00000000461	FBH1	91	85.227	Erinaceus_europaeus
ENSRNOG00000018549	Fbh1	95	52.536	ENSELUG00000006556	fbxo18	99	52.536	Esox_lucius
ENSRNOG00000018549	Fbh1	100	88.528	ENSFCAG00000009004	FBH1	98	88.528	Felis_catus
ENSRNOG00000018549	Fbh1	100	88.910	ENSFDAG00000009830	FBH1	100	88.910	Fukomys_damarensis
ENSRNOG00000018549	Fbh1	82	45.023	ENSFHEG00000007533	fbxo18	99	40.972	Fundulus_heteroclitus
ENSRNOG00000018549	Fbh1	93	42.857	ENSGMOG00000010594	-	93	42.857	Gadus_morhua
ENSRNOG00000018549	Fbh1	98	50.772	ENSGALG00000008162	FBH1	99	50.772	Gallus_gallus
ENSRNOG00000018549	Fbh1	82	44.118	ENSGAFG00000004166	fbxo18	99	40.166	Gambusia_affinis
ENSRNOG00000018549	Fbh1	97	42.274	ENSGACG00000019171	fbxo18	97	42.421	Gasterosteus_aculeatus
ENSRNOG00000018549	Fbh1	100	55.722	ENSGAGG00000021773	FBH1	99	57.895	Gopherus_agassizii
ENSRNOG00000018549	Fbh1	100	89.675	ENSGGOG00000013326	FBXO18	100	89.675	Gorilla_gorilla
ENSRNOG00000018549	Fbh1	88	46.377	ENSHBUG00000016673	fbxo18	99	41.956	Haplochromis_burtoni
ENSRNOG00000018549	Fbh1	100	90.057	ENSHGLG00000015581	FBXO18	100	90.057	Heterocephalus_glaber_female
ENSRNOG00000018549	Fbh1	100	90.057	ENSHGLG00100009896	FBXO18	100	90.057	Heterocephalus_glaber_male
ENSRNOG00000018549	Fbh1	90	45.238	ENSIPUG00000019144	fbxo18	96	45.135	Ictalurus_punctatus
ENSRNOG00000018549	Fbh1	100	89.388	ENSSTOG00000006496	FBH1	100	89.388	Ictidomys_tridecemlineatus
ENSRNOG00000018549	Fbh1	99	41.220	ENSKMAG00000021437	fbxo18	95	41.182	Kryptolebias_marmoratus
ENSRNOG00000018549	Fbh1	99	41.395	ENSLBEG00000023717	fbxo18	99	41.395	Labrus_bergylta
ENSRNOG00000018549	Fbh1	76	42.910	ENSLACG00000013504	FBH1	99	43.154	Latimeria_chalumnae
ENSRNOG00000018549	Fbh1	99	49.437	ENSLOCG00000015655	fbxo18	99	49.437	Lepisosteus_oculatus
ENSRNOG00000018549	Fbh1	100	87.859	ENSLAFG00000013105	FBH1	100	87.763	Loxodonta_africana
ENSRNOG00000018549	Fbh1	100	89.962	ENSMMUG00000015143	FBH1	100	89.866	Macaca_mulatta
ENSRNOG00000018549	Fbh1	100	89.962	ENSMNEG00000043475	FBH1	100	89.962	Macaca_nemestrina
ENSRNOG00000018549	Fbh1	99	90.335	ENSMLEG00000035307	FBH1	100	90.335	Mandrillus_leucophaeus
ENSRNOG00000018549	Fbh1	82	45.946	ENSMAMG00000000527	fbxo18	99	41.271	Mastacembelus_armatus
ENSRNOG00000018549	Fbh1	88	46.377	ENSMZEG00005015202	fbxo18	99	41.516	Maylandia_zebra
ENSRNOG00000018549	Fbh1	90	51.084	ENSMGAG00000003231	FBH1	100	51.139	Meleagris_gallopavo
ENSRNOG00000018549	Fbh1	100	87.703	ENSMICG00000009646	FBH1	100	92.308	Microcebus_murinus
ENSRNOG00000018549	Fbh1	97	40.949	ENSMMOG00000010268	fbxo18	97	40.852	Mola_mola
ENSRNOG00000018549	Fbh1	93	68.827	ENSMODG00000018516	FBH1	100	68.827	Monodelphis_domestica
ENSRNOG00000018549	Fbh1	97	42.535	ENSMALG00000010440	fbxo18	97	42.441	Monopterus_albus
ENSRNOG00000018549	Fbh1	100	97.121	MGP_CAROLIEiJ_G0023178	Fbh1	100	97.121	Mus_caroli
ENSRNOG00000018549	Fbh1	100	96.641	ENSMUSG00000058594	Fbh1	100	96.641	Mus_musculus
ENSRNOG00000018549	Fbh1	100	97.505	MGP_PahariEiJ_G0019237	Fbh1	100	97.505	Mus_pahari
ENSRNOG00000018549	Fbh1	100	96.641	MGP_SPRETEiJ_G0024095	Fbh1	100	96.641	Mus_spretus
ENSRNOG00000018549	Fbh1	100	88.145	ENSMPUG00000016343	FBH1	100	88.145	Mustela_putorius_furo
ENSRNOG00000018549	Fbh1	100	82.459	ENSMLUG00000000133	FBH1	100	82.459	Myotis_lucifugus
ENSRNOG00000018549	Fbh1	99	41.502	ENSNBRG00000018212	fbxo18	99	41.315	Neolamprologus_brichardi
ENSRNOG00000018549	Fbh1	100	89.866	ENSNLEG00000011537	FBH1	100	89.866	Nomascus_leucogenys
ENSRNOG00000018549	Fbh1	79	66.667	ENSMEUG00000000256	-	79	66.667	Notamacropus_eugenii
ENSRNOG00000018549	Fbh1	100	83.461	ENSOPRG00000002898	FBH1	97	83.461	Ochotona_princeps
ENSRNOG00000018549	Fbh1	100	88.196	ENSODEG00000004201	FBH1	100	88.196	Octodon_degus
ENSRNOG00000018549	Fbh1	83	45.647	ENSONIG00000011830	fbxo18	100	46.250	Oreochromis_niloticus
ENSRNOG00000018549	Fbh1	100	62.095	ENSOANG00000015459	FBH1	100	61.905	Ornithorhynchus_anatinus
ENSRNOG00000018549	Fbh1	100	87.882	ENSOCUG00000006237	FBH1	100	87.882	Oryctolagus_cuniculus
ENSRNOG00000018549	Fbh1	97	41.033	ENSORLG00000026493	fbxo18	97	40.657	Oryzias_latipes
ENSRNOG00000018549	Fbh1	97	41.298	ENSORLG00020004678	fbxo18	97	40.769	Oryzias_latipes_hni
ENSRNOG00000018549	Fbh1	97	40.918	ENSORLG00015001917	fbxo18	97	40.994	Oryzias_latipes_hsok
ENSRNOG00000018549	Fbh1	79	45.433	ENSOMEG00000011975	fbxo18	97	40.596	Oryzias_melastigma
ENSRNOG00000018549	Fbh1	100	86.902	ENSOGAG00000015682	FBH1	100	86.902	Otolemur_garnettii
ENSRNOG00000018549	Fbh1	100	86.807	ENSOARG00000012605	FBH1	100	86.807	Ovis_aries
ENSRNOG00000018549	Fbh1	100	89.771	ENSPPAG00000043946	FBH1	100	89.771	Pan_paniscus
ENSRNOG00000018549	Fbh1	100	88.337	ENSPPRG00000009687	FBH1	97	88.337	Panthera_pardus
ENSRNOG00000018549	Fbh1	100	88.241	ENSPTIG00000020396	FBH1	100	89.403	Panthera_tigris_altaica
ENSRNOG00000018549	Fbh1	100	89.771	ENSPTRG00000002261	FBH1	100	89.771	Pan_troglodytes
ENSRNOG00000018549	Fbh1	100	89.962	ENSPANG00000023427	FBH1	100	91.049	Papio_anubis
ENSRNOG00000018549	Fbh1	99	45.837	ENSPKIG00000025529	fbxo18	99	45.744	Paramormyrops_kingsleyae
ENSRNOG00000018549	Fbh1	99	55.379	ENSPSIG00000013802	FBH1	100	55.379	Pelodiscus_sinensis
ENSRNOG00000018549	Fbh1	100	93.954	ENSPEMG00000023309	Fbh1	100	93.954	Peromyscus_maniculatus_bairdii
ENSRNOG00000018549	Fbh1	100	67.112	ENSPCIG00000023460	FBH1	100	67.112	Phascolarctos_cinereus
ENSRNOG00000018549	Fbh1	82	44.520	ENSPFOG00000005889	fbxo18	99	40.256	Poecilia_formosa
ENSRNOG00000018549	Fbh1	99	40.404	ENSPLAG00000014934	fbxo18	99	40.422	Poecilia_latipinna
ENSRNOG00000018549	Fbh1	82	44.621	ENSPMEG00000021117	fbxo18	99	40.513	Poecilia_mexicana
ENSRNOG00000018549	Fbh1	69	45.576	ENSPREG00000017674	fbxo18	84	45.409	Poecilia_reticulata
ENSRNOG00000018549	Fbh1	95	89.596	ENSPPYG00000002064	FBH1	98	89.596	Pongo_abelii
ENSRNOG00000018549	Fbh1	100	82.314	ENSPCAG00000013584	FBH1	96	82.314	Procavia_capensis
ENSRNOG00000018549	Fbh1	100	83.843	ENSPCOG00000011617	FBH1	96	83.843	Propithecus_coquereli
ENSRNOG00000018549	Fbh1	100	87.380	ENSPVAG00000007082	FBH1	96	87.380	Pteropus_vampyrus
ENSRNOG00000018549	Fbh1	80	50.000	ENSPNYG00000015327	fbxo18	97	45.251	Pundamilia_nyererei
ENSRNOG00000018549	Fbh1	78	36.408	ENSPNAG00000001339	-	92	36.585	Pygocentrus_nattereri
ENSRNOG00000018549	Fbh1	82	51.936	ENSPNAG00000008968	fbxo18	99	47.015	Pygocentrus_nattereri
ENSRNOG00000018549	Fbh1	100	90.249	ENSRBIG00000038238	FBH1	100	90.249	Rhinopithecus_bieti
ENSRNOG00000018549	Fbh1	100	90.249	ENSRROG00000029282	FBH1	100	91.358	Rhinopithecus_roxellana
ENSRNOG00000018549	Fbh1	100	89.771	ENSSBOG00000026129	FBH1	100	90.741	Saimiri_boliviensis_boliviensis
ENSRNOG00000018549	Fbh1	100	66.444	ENSSHAG00000009789	FBH1	100	66.444	Sarcophilus_harrisii
ENSRNOG00000018549	Fbh1	99	46.267	ENSSFOG00015023855	fbxo18	98	46.267	Scleropages_formosus
ENSRNOG00000018549	Fbh1	82	45.961	ENSSMAG00000012330	fbxo18	88	45.848	Scophthalmus_maximus
ENSRNOG00000018549	Fbh1	82	45.672	ENSSDUG00000014911	fbxo18	85	45.558	Seriola_dumerili
ENSRNOG00000018549	Fbh1	77	45.264	ENSSLDG00000014394	fbxo18	87	45.141	Seriola_lalandi_dorsalis
ENSRNOG00000018549	Fbh1	100	49.240	ENSSPUG00000001370	FBH1	99	49.240	Sphenodon_punctatus
ENSRNOG00000018549	Fbh1	79	46.846	ENSSPAG00000002282	fbxo18	97	42.495	Stegastes_partitus
ENSRNOG00000018549	Fbh1	100	86.177	ENSSSCG00000030030	FBH1	92	95.214	Sus_scrofa
ENSRNOG00000018549	Fbh1	80	45.476	ENSTNIG00000006893	fbxo18	100	45.241	Tetraodon_nigroviridis
ENSRNOG00000018549	Fbh1	92	94.643	ENSTBEG00000003595	FBH1	89	94.643	Tupaia_belangeri
ENSRNOG00000018549	Fbh1	100	86.055	ENSTTRG00000001338	FBH1	97	86.055	Tursiops_truncatus
ENSRNOG00000018549	Fbh1	100	88.910	ENSUAMG00000007277	FBH1	100	88.910	Ursus_americanus
ENSRNOG00000018549	Fbh1	93	89.815	ENSUMAG00000012189	FBH1	100	89.815	Ursus_maritimus
ENSRNOG00000018549	Fbh1	99	89.645	ENSVVUG00000006823	FBH1	100	90.432	Vulpes_vulpes
ENSRNOG00000018549	Fbh1	99	52.722	ENSXETG00000018125	fbh1	99	52.722	Xenopus_tropicalis
ENSRNOG00000018549	Fbh1	99	40.348	ENSXMAG00000019200	fbxo18	99	40.585	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000725	recombinational repair	21873635.	IBA	Process
GO:0000737	DNA catabolic process, endonucleolytic	-	IEA	Process
GO:0000737	DNA catabolic process, endonucleolytic	-	ISO	Process
GO:0000785	chromatin	-	IEA	Component
GO:0000785	chromatin	-	ISO	Component
GO:0001934	positive regulation of protein phosphorylation	-	IEA	Process
GO:0001934	positive regulation of protein phosphorylation	-	ISO	Process
GO:0003678	DNA helicase activity	-	ISO	Function
GO:0003690	double-stranded DNA binding	-	IEA	Function
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0003697	single-stranded DNA binding	-	IEA	Function
GO:0003697	single-stranded DNA binding	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0008219	cell death	-	IEA	Process
GO:0008219	cell death	-	ISO	Process
GO:0015616	DNA translocase activity	-	IEA	Function
GO:0015616	DNA translocase activity	-	ISO	Function
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0019005	SCF ubiquitin ligase complex	-	IEA	Component
GO:0019005	SCF ubiquitin ligase complex	-	ISO	Component
GO:0031297	replication fork processing	21873635.	IBA	Process
GO:0031297	replication fork processing	-	ISO	Process
GO:0032508	DNA duplex unwinding	-	IEA	Process
GO:0035562	negative regulation of chromatin binding	-	IEA	Process
GO:0035562	negative regulation of chromatin binding	-	ISO	Process
GO:0043138	3'-5' DNA helicase activity	-	ISO	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0048478	replication fork protection	-	IEA	Process
GO:0048478	replication fork protection	-	ISO	Process
GO:0072429	response to intra-S DNA damage checkpoint signaling	-	IEA	Process
GO:0072429	response to intra-S DNA damage checkpoint signaling	-	ISO	Process
GO:1902231	positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage	-	IEA	Process
GO:1902231	positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage	-	ISO	Process
GO:2000042	negative regulation of double-strand break repair via homologous recombination	-	IEA	Process
GO:2000042	negative regulation of double-strand break repair via homologous recombination	-	ISO	Process