EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018561 (Gene tree)
Gene ID: 294007
Gene Symbol: Pprc1
Alias: LOC294007
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16553 bases
Position: chr1:265809754-265826306
Accession: 1309688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025222	RRM_1	PF00076.22	4e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025221	-	5371	XM_006231451	ENSRNOP00000025222	1637 (aa)	XP_006231513	D3ZRG8

Gene Model

Click here to download ENSRNOG00000018561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018561	Pprc1	81	99.291	ENSG00000148840	PPRC1	96	99.291	Homo_sapiens
ENSRNOG00000018561	Pprc1	100	74.492	ENSAMEG00000017685	PPRC1	100	74.134	Ailuropoda_melanoleuca
ENSRNOG00000018561	Pprc1	81	99.291	ENSANAG00000029448	PPRC1	96	99.291	Aotus_nancymaae
ENSRNOG00000018561	Pprc1	81	99.291	ENSBTAG00000007427	PPRC1	96	99.291	Bos_taurus
ENSRNOG00000018561	Pprc1	81	99.291	ENSCJAG00000017812	PPRC1	96	99.291	Callithrix_jacchus
ENSRNOG00000018561	Pprc1	100	73.747	ENSCAFG00000010040	PPRC1	100	73.536	Canis_familiaris
ENSRNOG00000018561	Pprc1	79	99.310	ENSCAFG00020010030	PPRC1	99	99.291	Canis_lupus_dingo
ENSRNOG00000018561	Pprc1	81	99.291	ENSCHIG00000011471	PPRC1	96	99.291	Capra_hircus
ENSRNOG00000018561	Pprc1	81	97.959	ENSCPOG00000032149	PPRC1	71	99.291	Cavia_porcellus
ENSRNOG00000018561	Pprc1	81	99.291	ENSCCAG00000014910	PPRC1	96	99.291	Cebus_capucinus
ENSRNOG00000018561	Pprc1	81	99.291	ENSCATG00000029634	PPRC1	96	99.291	Cercocebus_atys
ENSRNOG00000018561	Pprc1	81	98.592	ENSCLAG00000001364	PPRC1	96	99.291	Chinchilla_lanigera
ENSRNOG00000018561	Pprc1	100	74.167	ENSCSAG00000005471	PPRC1	100	74.032	Chlorocebus_sabaeus
ENSRNOG00000018561	Pprc1	75	70.491	ENSCHOG00000006574	PPRC1	99	71.395	Choloepus_hoffmanni
ENSRNOG00000018561	Pprc1	81	99.291	ENSCANG00000037336	PPRC1	96	99.291	Colobus_angolensis_palliatus
ENSRNOG00000018561	Pprc1	100	81.973	ENSCGRG00001011726	Pprc1	100	81.486	Cricetulus_griseus_chok1gshd
ENSRNOG00000018561	Pprc1	95	82.896	ENSCGRG00000012760	Pprc1	100	82.383	Cricetulus_griseus_crigri
ENSRNOG00000018561	Pprc1	100	73.234	ENSDNOG00000040730	PPRC1	100	73.116	Dasypus_novemcinctus
ENSRNOG00000018561	Pprc1	100	74.277	ENSDORG00000001046	Pprc1	100	74.864	Dipodomys_ordii
ENSRNOG00000018561	Pprc1	92	81.350	ENSETEG00000019254	PPRC1	92	84.887	Echinops_telfairi
ENSRNOG00000018561	Pprc1	100	74.180	ENSEASG00005007583	PPRC1	100	72.999	Equus_asinus_asinus
ENSRNOG00000018561	Pprc1	81	99.291	ENSECAG00000009482	PPRC1	96	99.291	Equus_caballus
ENSRNOG00000018561	Pprc1	69	78.116	ENSEEUG00000014216	PPRC1	69	76.560	Erinaceus_europaeus
ENSRNOG00000018561	Pprc1	81	99.291	ENSFCAG00000001238	PPRC1	96	99.291	Felis_catus
ENSRNOG00000018561	Pprc1	95	72.992	ENSFDAG00000011496	PPRC1	100	72.647	Fukomys_damarensis
ENSRNOG00000018561	Pprc1	81	99.291	ENSGGOG00000002155	PPRC1	96	99.291	Gorilla_gorilla
ENSRNOG00000018561	Pprc1	100	73.114	ENSLAFG00000014232	PPRC1	86	70.778	Loxodonta_africana
ENSRNOG00000018561	Pprc1	81	99.291	ENSMFAG00000038589	PPRC1	96	99.291	Macaca_fascicularis
ENSRNOG00000018561	Pprc1	81	99.291	ENSMMUG00000001186	PPRC1	96	99.291	Macaca_mulatta
ENSRNOG00000018561	Pprc1	81	99.291	ENSMNEG00000031603	PPRC1	96	99.291	Macaca_nemestrina
ENSRNOG00000018561	Pprc1	81	99.291	ENSMLEG00000035092	PPRC1	96	99.291	Mandrillus_leucophaeus
ENSRNOG00000018561	Pprc1	100	82.171	ENSMAUG00000016674	Pprc1	100	82.596	Mesocricetus_auratus
ENSRNOG00000018561	Pprc1	81	99.291	ENSMICG00000011794	PPRC1	96	99.291	Microcebus_murinus
ENSRNOG00000018561	Pprc1	63	60.963	ENSMODG00000011467	-	87	55.775	Monodelphis_domestica
ENSRNOG00000018561	Pprc1	100	86.175	MGP_CAROLIEiJ_G0023026	Pprc1	100	86.297	Mus_caroli
ENSRNOG00000018561	Pprc1	100	85.810	ENSMUSG00000055491	Pprc1	100	84.900	Mus_musculus
ENSRNOG00000018561	Pprc1	100	86.199	MGP_PahariEiJ_G0014516	Pprc1	100	86.683	Mus_pahari
ENSRNOG00000018561	Pprc1	100	86.087	MGP_SPRETEiJ_G0023947	Pprc1	100	85.541	Mus_spretus
ENSRNOG00000018561	Pprc1	81	99.291	ENSMPUG00000016888	PPRC1	96	99.291	Mustela_putorius_furo
ENSRNOG00000018561	Pprc1	100	72.657	ENSMLUG00000006217	PPRC1	100	72.684	Myotis_lucifugus
ENSRNOG00000018561	Pprc1	100	80.327	ENSNGAG00000016516	Pprc1	100	79.600	Nannospalax_galili
ENSRNOG00000018561	Pprc1	100	71.845	ENSNLEG00000014996	PPRC1	99	82.270	Nomascus_leucogenys
ENSRNOG00000018561	Pprc1	50	91.200	ENSMEUG00000013795	-	52	91.200	Notamacropus_eugenii
ENSRNOG00000018561	Pprc1	91	82.468	ENSOPRG00000009346	PPRC1	91	82.468	Ochotona_princeps
ENSRNOG00000018561	Pprc1	100	73.242	ENSOCUG00000000510	PPRC1	100	72.825	Oryctolagus_cuniculus
ENSRNOG00000018561	Pprc1	100	72.820	ENSOGAG00000016354	PPRC1	100	73.297	Otolemur_garnettii
ENSRNOG00000018561	Pprc1	97	72.049	ENSOARG00000017509	PPRC1	82	71.744	Ovis_aries
ENSRNOG00000018561	Pprc1	100	72.083	ENSPPAG00000032544	PPRC1	100	71.888	Pan_paniscus
ENSRNOG00000018561	Pprc1	81	99.291	ENSPPRG00000004274	PPRC1	96	99.291	Panthera_pardus
ENSRNOG00000018561	Pprc1	81	99.291	ENSPTIG00000013709	PPRC1	96	99.291	Panthera_tigris_altaica
ENSRNOG00000018561	Pprc1	81	99.291	ENSPTRG00000002883	PPRC1	96	99.291	Pan_troglodytes
ENSRNOG00000018561	Pprc1	81	99.291	ENSPANG00000021042	PPRC1	96	99.291	Papio_anubis
ENSRNOG00000018561	Pprc1	82	77.237	ENSPCAG00000008277	PPRC1	95	72.626	Procavia_capensis
ENSRNOG00000018561	Pprc1	81	98.582	ENSPCOG00000025917	PPRC1	96	98.582	Propithecus_coquereli
ENSRNOG00000018561	Pprc1	93	71.071	ENSPVAG00000004048	PPRC1	93	70.796	Pteropus_vampyrus
ENSRNOG00000018561	Pprc1	81	99.291	ENSRBIG00000027711	PPRC1	96	99.291	Rhinopithecus_bieti
ENSRNOG00000018561	Pprc1	81	99.291	ENSRROG00000044599	PPRC1	96	99.291	Rhinopithecus_roxellana
ENSRNOG00000018561	Pprc1	94	78.502	ENSSARG00000004030	PPRC1	95	79.889	Sorex_araneus
ENSRNOG00000018561	Pprc1	100	73.070	ENSSSCG00000010575	PPRC1	100	72.036	Sus_scrofa
ENSRNOG00000018561	Pprc1	100	73.778	ENSTTRG00000014966	PPRC1	100	73.107	Tursiops_truncatus
ENSRNOG00000018561	Pprc1	76	99.291	ENSUAMG00000028058	PPRC1	96	99.291	Ursus_americanus
ENSRNOG00000018561	Pprc1	95	99.291	ENSUMAG00000023041	PPRC1	96	99.291	Ursus_maritimus
ENSRNOG00000018561	Pprc1	81	99.291	ENSVVUG00000002566	PPRC1	96	99.291	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003712	transcription coregulator activity	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0008134	transcription factor binding	21873635.	IBA	Function
GO:0030374	nuclear receptor transcription coactivator activity	21873635.	IBA	Function
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	21873635.	IBA	Process