EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000018568 (Gene tree)
Gene ID
287709
Gene Symbol
Rab5c
Alias
LOC287709
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
23440 bases
Position
chr10:88621925-88645364
Accession
1307095
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000031520MMR_HSR1PF01926.230.0001311
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000030344-1875-ENSRNOP00000031520216 (aa)-B0BNK1
Gene Model
Click here to download ENSRNOG00000018568's gene model file
Pathways
Pathway IDPathway NameSource
rno04014Ras signaling pathwayKEGG
rno04144EndocytosisKEGG
rno04145PhagosomeKEGG
rno04962Vasopressin-regulated water reabsorptionKEGG
rno05146AmoebiasisKEGG
rno05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018568's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000018568Rab5c9140.816ENSRNOG00000018176Rab6a9340.816
ENSRNOG00000018568Rab5c8944.330ENSRNOG00000050510LOC1025551679644.330
ENSRNOG00000018568Rab5c9338.350ENSRNOG00000013035Rab33b8938.350
ENSRNOG00000018568Rab5c8133.702ENSRNOG00000016611Hras9433.702
ENSRNOG00000018568Rab5c8937.949ENSRNOG00000022014Rab359637.949
ENSRNOG00000018568Rab5c9042.512ENSRNOG00000007648Rab11b9442.512
ENSRNOG00000018568Rab5c7331.875ENSRNOG00000023375Rab346331.875
ENSRNOG00000018568Rab5c8036.416ENSRNOG00000012629Rab237336.416
ENSRNOG00000018568Rab5c8937.500ENSRNOG00000016733Rab139537.500
ENSRNOG00000018568Rab5c8943.590ENSRNOG00000004992Rab1a9543.590
ENSRNOG00000018568Rab5c7531.902ENSRNOG00000023079Nras8531.902
ENSRNOG00000018568Rab5c9042.029ENSRNOG00000011302Rab11a9442.029
ENSRNOG00000018568Rab5c5531.707ENSRNOG00000005988Arl8a6231.707
ENSRNOG00000018568Rab5c9441.379ENSRNOG00000009198Rab6b9841.379
ENSRNOG00000018568Rab5c8940.594ENSRNOG00000023640Rab259340.594
ENSRNOG00000018568Rab5c8639.785ENSRNOG00000018901Rab148739.785
ENSRNOG00000018568Rab5c8934.343ENSRNOG00000030443Rab9a9734.343
ENSRNOG00000018568Rab5c8130.682ENSRNOG00000050578Rheb9330.682
ENSRNOG00000018568Rab5c7544.720ENSRNOG00000005963Rab2a7844.720
ENSRNOG00000018568Rab5c8139.560ENSRNOG00000019295Rab127239.560
ENSRNOG00000018568Rab5c7439.623ENSRNOG00000007364Rab157539.623
ENSRNOG00000018568Rab5c9047.938ENSRNOG00000005762Rab22a9847.938
ENSRNOG00000018568Rab5c9146.939ENSRNOG00000042189Rab319846.939
ENSRNOG00000018568Rab5c9786.124ENSRNOG00000006130Rab5b9786.124
ENSRNOG00000018568Rab5c5531.967ENSRNOG00000055860Arl8b6231.967
ENSRNOG00000018568Rab5c8541.799ENSRNOG00000018972Rab188841.799
ENSRNOG00000018568Rab5c7832.544ENSRNOG00000009338Kras9830.102
ENSRNOG00000018568Rab5c8141.899ENSRNOG00000012247Rab7a9541.899
ENSRNOG00000018568Rab5c8935.354ENSRNOG00000047960Rab9b9735.354
ENSRNOG00000018568Rab5c8936.318ENSRNOG00000006698Rab33a8536.318
ENSRNOG00000018568Rab5c8339.459ENSRNOG00000010224Rab309139.459
ENSRNOG00000018568Rab5c7336.250ENSRNOG00000001311Rab366036.250
ENSRNOG00000018568Rab5c7743.713ENSRNOG00000012488Rab2b7843.713
ENSRNOG00000018568Rab5c7135.948ENSRNOG00000013947Rabl26035.948
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000018568Rab5c10099.074ENSG00000108774RAB5C100100.000Homo_sapiens
ENSRNOG00000018568Rab5c9989.302ENSAPOG00000016864rab5c9891.628Acanthochromis_polyacanthus
ENSRNOG00000018568Rab5c10099.074ENSAMEG00000006003RAB5C10099.074Ailuropoda_melanoleuca
ENSRNOG00000018568Rab5c9988.889ENSACIG00000010896rab5c9890.741Amphilophus_citrinellus
ENSRNOG00000018568Rab5c9989.352ENSAOCG00000016614rab5c9891.667Amphiprion_ocellaris
ENSRNOG00000018568Rab5c9789.100ENSAPEG00000017868-9791.469Amphiprion_percula
ENSRNOG00000018568Rab5c10089.908ENSATEG00000001937rab5c10091.284Anabas_testudineus
ENSRNOG00000018568Rab5c9499.510ENSANAG00000025390RAB5C10099.510Aotus_nancymaae
ENSRNOG00000018568Rab5c9987.963ENSACLG00000002706rab5c9890.741Astatotilapia_calliptera
ENSRNOG00000018568Rab5c9689.573ENSACLG00000008615-9989.041Astatotilapia_calliptera
ENSRNOG00000018568Rab5c9989.862ENSAMXG00000043717rab5c9891.705Astyanax_mexicanus
ENSRNOG00000018568Rab5c9689.048ENSAMXG00000037267-9991.429Astyanax_mexicanus
ENSRNOG00000018568Rab5c10099.074ENSBTAG00000006982RAB5C10099.074Bos_taurus
ENSRNOG00000018568Rab5c9975.814WBGene00004268rab-59975.814Caenorhabditis_elegans
ENSRNOG00000018568Rab5c10098.611ENSCAFG00000015629RAB5C10098.611Canis_familiaris
ENSRNOG00000018568Rab5c10098.611ENSCAFG00020013537RAB5C10098.611Canis_lupus_dingo
ENSRNOG00000018568Rab5c10099.074ENSCHIG00000012960RAB5C10099.074Capra_hircus
ENSRNOG00000018568Rab5c10099.537ENSTSYG00000030531RAB5C10099.537Carlito_syrichta
ENSRNOG00000018568Rab5c10099.537ENSCCAG00000025940RAB5C10099.537Cebus_capucinus
ENSRNOG00000018568Rab5c10099.074ENSCATG00000040873RAB5C10099.074Cercocebus_atys
ENSRNOG00000018568Rab5c10098.148ENSCLAG00000016650RAB5C10098.148Chinchilla_lanigera
ENSRNOG00000018568Rab5c8299.438ENSCHOG00000009886RAB5C10099.438Choloepus_hoffmanni
ENSRNOG00000018568Rab5c9976.168ENSCING00000003340-9976.168Ciona_intestinalis
ENSRNOG00000018568Rab5c9974.545ENSCSAVG00000000613-9983.333Ciona_savignyi
ENSRNOG00000018568Rab5c10099.074ENSCGRG00001014226Rab5c10099.074Cricetulus_griseus_chok1gshd
ENSRNOG00000018568Rab5c10099.074ENSCGRG00000007534Rab5c10099.074Cricetulus_griseus_crigri
ENSRNOG00000018568Rab5c9991.204ENSCSEG00000017024rab5c9891.204Cynoglossus_semilaevis
ENSRNOG00000018568Rab5c9989.352ENSCVAG00000009550rab5c9891.204Cyprinodon_variegatus
ENSRNOG00000018568Rab5c10098.611ENSDNOG00000038853RAB5C10098.611Dasypus_novemcinctus
ENSRNOG00000018568Rab5c10098.611ENSDORG00000006819Rab5c10098.611Dipodomys_ordii
ENSRNOG00000018568Rab5c9974.648FBgn0014010Rab59574.648Drosophila_melanogaster
ENSRNOG00000018568Rab5c9979.535ENSEBUG00000014794rab5c10079.535Eptatretus_burgeri
ENSRNOG00000018568Rab5c10099.074ENSEASG00005009281RAB5C10099.074Equus_asinus_asinus
ENSRNOG00000018568Rab5c10099.537ENSECAG00000025054RAB5C10099.537Equus_caballus
ENSRNOG00000018568Rab5c10099.074ENSEEUG00000002790RAB5C10099.074Erinaceus_europaeus
ENSRNOG00000018568Rab5c9987.963ENSELUG00000018516rab5c9990.278Esox_lucius
ENSRNOG00000018568Rab5c9988.426ENSELUG00000010439-9888.426Esox_lucius
ENSRNOG00000018568Rab5c10099.074ENSFCAG00000002148RAB5C10099.074Felis_catus
ENSRNOG00000018568Rab5c10096.296ENSFDAG00000021541RAB5C10096.296Fukomys_damarensis
ENSRNOG00000018568Rab5c9989.352ENSFHEG00000012117rab5c9891.204Fundulus_heteroclitus
ENSRNOG00000018568Rab5c9991.244ENSFHEG00000015268-9991.244Fundulus_heteroclitus
ENSRNOG00000018568Rab5c7888.166ENSGMOG00000001876-9888.166Gadus_morhua
ENSRNOG00000018568Rab5c9987.963ENSGMOG00000015096rab5c9890.741Gadus_morhua
ENSRNOG00000018568Rab5c9691.429ENSGAFG00000003642-9988.636Gambusia_affinis
ENSRNOG00000018568Rab5c9989.815ENSGAFG00000000884rab5c9891.667Gambusia_affinis
ENSRNOG00000018568Rab5c8794.681ENSGACG00000008659rab5c9887.037Gasterosteus_aculeatus
ENSRNOG00000018568Rab5c10099.074ENSGGOG00000005472RAB5C10099.074Gorilla_gorilla
ENSRNOG00000018568Rab5c9987.963ENSHBUG00000002014rab5c9890.741Haplochromis_burtoni
ENSRNOG00000018568Rab5c9689.573ENSHBUG00000006823-9989.041Haplochromis_burtoni
ENSRNOG00000018568Rab5c10095.833ENSHGLG00000012067RAB5C10095.833Heterocephalus_glaber_female
ENSRNOG00000018568Rab5c9989.862ENSHCOG00000004662rab5c9791.244Hippocampus_comes
ENSRNOG00000018568Rab5c9782.075ENSHCOG00000020238-10080.455Hippocampus_comes
ENSRNOG00000018568Rab5c9687.619ENSIPUG00000020082rab5c9888.532Ictalurus_punctatus
ENSRNOG00000018568Rab5c10098.611ENSSTOG00000006620RAB5C10098.611Ictidomys_tridecemlineatus
ENSRNOG00000018568Rab5c10099.074ENSJJAG00000021181Rab5c10099.074Jaculus_jaculus
ENSRNOG00000018568Rab5c9988.479ENSKMAG00000017417-9988.479Kryptolebias_marmoratus
ENSRNOG00000018568Rab5c9988.889ENSKMAG00000020038rab5c9891.204Kryptolebias_marmoratus
ENSRNOG00000018568Rab5c9990.278ENSLBEG00000004128rab5c9892.130Labrus_bergylta
ENSRNOG00000018568Rab5c10088.073ENSLBEG00000010408-9988.073Labrus_bergylta
ENSRNOG00000018568Rab5c9993.925ENSLOCG00000012566rab5c10093.925Lepisosteus_oculatus
ENSRNOG00000018568Rab5c10099.074ENSMFAG00000039627RAB5C10099.074Macaca_fascicularis
ENSRNOG00000018568Rab5c10099.074ENSMNEG00000000355RAB5C10099.074Macaca_nemestrina
ENSRNOG00000018568Rab5c9988.479ENSMAMG00000016207-9988.479Mastacembelus_armatus
ENSRNOG00000018568Rab5c9988.426ENSMAMG00000022322rab5c9890.741Mastacembelus_armatus
ENSRNOG00000018568Rab5c9689.573ENSMZEG00005021090-9989.041Maylandia_zebra
ENSRNOG00000018568Rab5c9987.963ENSMZEG00005022735rab5c9890.741Maylandia_zebra
ENSRNOG00000018568Rab5c100100.000ENSMAUG00000015005Rab5c100100.000Mesocricetus_auratus
ENSRNOG00000018568Rab5c10099.074ENSMICG00000041608RAB5C10099.074Microcebus_murinus
ENSRNOG00000018568Rab5c10099.074ENSMOCG00000018531-10099.074Microtus_ochrogaster
ENSRNOG00000018568Rab5c10089.908ENSMMOG00000020621rab5c9989.908Mola_mola
ENSRNOG00000018568Rab5c9987.615ENSMALG00000022348-9987.615Monopterus_albus
ENSRNOG00000018568Rab5c9784.360ENSMALG00000006052rab5c9684.186Monopterus_albus
ENSRNOG00000018568Rab5c10099.537MGP_CAROLIEiJ_G0017184Rab5c10099.537Mus_caroli
ENSRNOG00000018568Rab5c10099.537ENSMUSG00000019173Rab5c10099.537Mus_musculus
ENSRNOG00000018568Rab5c10099.537MGP_PahariEiJ_G0018314Rab5c10099.537Mus_pahari
ENSRNOG00000018568Rab5c10099.537MGP_SPRETEiJ_G0018027Rab5c10099.537Mus_spretus
ENSRNOG00000018568Rab5c10099.074ENSMPUG00000010554RAB5C10099.074Mustela_putorius_furo
ENSRNOG00000018568Rab5c10098.148ENSNGAG00000010286Rab5c10098.148Nannospalax_galili
ENSRNOG00000018568Rab5c9988.889ENSNBRG00000018165rab5c9891.667Neolamprologus_brichardi
ENSRNOG00000018568Rab5c9689.573ENSNBRG00000016922-9989.041Neolamprologus_brichardi
ENSRNOG00000018568Rab5c8292.697ENSOPRG00000008255RAB5C10092.697Ochotona_princeps
ENSRNOG00000018568Rab5c10097.222ENSODEG00000017920RAB5C10097.222Octodon_degus
ENSRNOG00000018568Rab5c9988.889ENSONIG00000001113rab5c9891.667Oreochromis_niloticus
ENSRNOG00000018568Rab5c10088.532ENSORLG00000003882rab5c10089.908Oryzias_latipes
ENSRNOG00000018568Rab5c10089.450ENSORLG00020008388rab5c10089.450Oryzias_latipes_hni
ENSRNOG00000018568Rab5c10088.532ENSORLG00015021900rab5c10089.908Oryzias_latipes_hsok
ENSRNOG00000018568Rab5c10088.532ENSOMEG00000023078rab5c10089.908Oryzias_melastigma
ENSRNOG00000018568Rab5c10099.074ENSOGAG00000009456RAB5C10099.074Otolemur_garnettii
ENSRNOG00000018568Rab5c10099.074ENSOARG00000018768RAB5C10099.074Ovis_aries
ENSRNOG00000018568Rab5c10099.074ENSPPAG00000037206RAB5C10099.074Pan_paniscus
ENSRNOG00000018568Rab5c10099.074ENSPPRG00000005745RAB5C10099.074Panthera_pardus
ENSRNOG00000018568Rab5c10099.074ENSPTIG00000008177RAB5C10099.074Panthera_tigris_altaica
ENSRNOG00000018568Rab5c10099.074ENSPTRG00000009194RAB5C10099.074Pan_troglodytes
ENSRNOG00000018568Rab5c9989.302ENSPKIG00000001237-9989.302Paramormyrops_kingsleyae
ENSRNOG00000018568Rab5c9987.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSRNOG00000018568Rab5c9986.574ENSPMGG00000010792rab5c9790.521Periophthalmus_magnuspinnatus
ENSRNOG00000018568Rab5c10099.074ENSPEMG00000017971Rab5c10099.074Peromyscus_maniculatus_bairdii
ENSRNOG00000018568Rab5c9979.535ENSPMAG00000001399rab5c10079.535Petromyzon_marinus
ENSRNOG00000018568Rab5c9978.829ENSPMAG00000000008rab5c10078.829Petromyzon_marinus
ENSRNOG00000018568Rab5c9978.605ENSPMAG00000007867rab5c10078.605Petromyzon_marinus
ENSRNOG00000018568Rab5c10097.222ENSPCIG00000020225-10097.222Phascolarctos_cinereus
ENSRNOG00000018568Rab5c9989.815ENSPLAG00000004790rab5c9891.667Poecilia_latipinna
ENSRNOG00000018568Rab5c9990.323ENSPLAG00000016333-9990.323Poecilia_latipinna
ENSRNOG00000018568Rab5c9989.815ENSPMEG00000011336rab5c9891.667Poecilia_mexicana
ENSRNOG00000018568Rab5c9888.732ENSPMEG00000012614-9889.041Poecilia_mexicana
ENSRNOG00000018568Rab5c9989.815ENSPREG00000010146rab5c9891.667Poecilia_reticulata
ENSRNOG00000018568Rab5c8792.593ENSPREG00000022167-8993.989Poecilia_reticulata
ENSRNOG00000018568Rab5c10099.074ENSPPYG00000008398RAB5C10099.074Pongo_abelii
ENSRNOG00000018568Rab5c10098.148ENSPCAG00000016412RAB5C10098.148Procavia_capensis
ENSRNOG00000018568Rab5c10098.148ENSPCOG00000026327RAB5C10098.148Propithecus_coquereli
ENSRNOG00000018568Rab5c10099.537ENSPVAG00000003867RAB5C10099.537Pteropus_vampyrus
ENSRNOG00000018568Rab5c9987.963ENSPNYG00000010615rab5c9890.741Pundamilia_nyererei
ENSRNOG00000018568Rab5c9689.573ENSPNYG00000015851-9989.041Pundamilia_nyererei
ENSRNOG00000018568Rab5c9787.264ENSPNAG00000002218-9989.623Pygocentrus_nattereri
ENSRNOG00000018568Rab5c9991.244ENSPNAG00000028138rab5c9891.244Pygocentrus_nattereri
ENSRNOG00000018568Rab5c10099.074ENSRBIG00000031376RAB5C10099.074Rhinopithecus_bieti
ENSRNOG00000018568Rab5c10099.074ENSRROG00000032895RAB5C10099.074Rhinopithecus_roxellana
ENSRNOG00000018568Rab5c10099.537ENSSBOG00000032552-10099.537Saimiri_boliviensis_boliviensis
ENSRNOG00000018568Rab5c10097.685ENSSHAG00000005267-10097.685Sarcophilus_harrisii
ENSRNOG00000018568Rab5c9987.558ENSSFOG00015009988-9987.558Scleropages_formosus
ENSRNOG00000018568Rab5c9692.308ENSSMAG00000007323rab5c9890.278Scophthalmus_maximus
ENSRNOG00000018568Rab5c9991.667ENSSDUG00000023008rab5c9891.667Seriola_dumerili
ENSRNOG00000018568Rab5c9991.204ENSSLDG00000017771rab5c9891.204Seriola_lalandi_dorsalis
ENSRNOG00000018568Rab5c10096.296ENSSPUG00000012950-10096.296Sphenodon_punctatus
ENSRNOG00000018568Rab5c9989.815ENSSPAG00000006436rab5c9892.593Stegastes_partitus
ENSRNOG00000018568Rab5c10099.074ENSSSCG00000032467RAB5C10099.074Sus_scrofa
ENSRNOG00000018568Rab5c9987.963ENSTRUG00000015590rab5c9890.278Takifugu_rubripes
ENSRNOG00000018568Rab5c9690.909ENSTNIG00000011711rab5c9590.909Tetraodon_nigroviridis
ENSRNOG00000018568Rab5c10099.074ENSTBEG00000007092RAB5C10099.074Tupaia_belangeri
ENSRNOG00000018568Rab5c10098.148ENSTTRG00000006673RAB5C10098.148Tursiops_truncatus
ENSRNOG00000018568Rab5c10099.074ENSUAMG00000024343RAB5C10099.074Ursus_americanus
ENSRNOG00000018568Rab5c10099.074ENSUMAG00000023270RAB5C10099.074Ursus_maritimus
ENSRNOG00000018568Rab5c9691.905ENSXCOG00000006300-9989.091Xiphophorus_couchianus
ENSRNOG00000018568Rab5c9989.352ENSXCOG00000016788rab5c9891.667Xiphophorus_couchianus
ENSRNOG00000018568Rab5c9990.783ENSXMAG00000022179-9990.783Xiphophorus_maculatus
ENSRNOG00000018568Rab5c9989.815ENSXMAG00000003266rab5c9891.667Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-ISOFunction
GO:0005525GTP binding-IEAFunction
GO:0005768endosome21873635.IBAComponent
GO:0005768endosome-ISOComponent
GO:0005769early endosome21873635.IBAComponent
GO:0005811lipid droplet-IEAComponent
GO:0005811lipid droplet-ISOComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0007032endosome organization-ISOProcess
GO:0008150biological_process-NDProcess
GO:0019003GDP binding-IEAFunction
GO:0019003GDP binding-ISOFunction
GO:0030100regulation of endocytosis21873635.IBAProcess
GO:0030100regulation of endocytosis-ISOProcess
GO:0030139endocytic vesicle21873635.IBAComponent
GO:0030139endocytic vesicle-ISOComponent
GO:0031410cytoplasmic vesicle12051767.IDAComponent
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0048227plasma membrane to endosome transport-IEAProcess
GO:0048227plasma membrane to endosome transport-ISOProcess
GO:0070382exocytic vesicle-ISOComponent
GO:0098993anchored component of synaptic vesicle membrane20926670.EXPComponent
GO:0098993anchored component of synaptic vesicle membrane20926670.IDAComponent

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