EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018604 (Gene tree)
Gene ID: 293481
Gene Symbol: Tufm
Alias: LOC293481
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3608 bases
Position: chr1:197903582-197907189
Accession: 1305501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025203	GTP_EFTU	PF00009.27	1.7e-54	1	1
ENSRNOP00000025203	GTP_EFTU_D2	PF03144.25	5.1e-15	1	1
ENSRNOP00000025203	GTP_EFTU_D3	PF03143.17	1.5e-22	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025203	-	1884	XM_006230224	ENSRNOP00000025203	452 (aa)	XP_006230286	P85834

Gene Model

Click here to download ENSRNOG00000018604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000018604	Tufm	86	30.357	ENSRNOG00000051885	LOC100360413	95	30.357
ENSRNOG00000018604	Tufm	86	30.357	ENSRNOG00000056855	LOC100911991	95	30.357
ENSRNOG00000018604	Tufm	86	30.580	ENSRNOG00000009439	Eef1a1	95	30.580
ENSRNOG00000018604	Tufm	86	31.849	ENSRNOG00000012477	Eef1a2	95	31.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018604	Tufm	99	94.013	ENSG00000178952	TUFM	99	94.013	Homo_sapiens
ENSRNOG00000018604	Tufm	92	78.606	ENSAPOG00000013385	tufm	99	74.945	Acanthochromis_polyacanthus
ENSRNOG00000018604	Tufm	100	94.934	ENSAMEG00000015551	TUFM	100	94.934	Ailuropoda_melanoleuca
ENSRNOG00000018604	Tufm	92	78.417	ENSACIG00000007388	tufm	96	78.417	Amphilophus_citrinellus
ENSRNOG00000018604	Tufm	92	78.846	ENSAOCG00000001032	tufm	97	78.657	Amphiprion_ocellaris
ENSRNOG00000018604	Tufm	92	78.846	ENSAPEG00000015751	tufm	96	79.369	Amphiprion_percula
ENSRNOG00000018604	Tufm	93	77.197	ENSATEG00000002905	tufm	97	74.279	Anabas_testudineus
ENSRNOG00000018604	Tufm	97	79.412	ENSACAG00000005399	TUFM	96	79.412	Anolis_carolinensis
ENSRNOG00000018604	Tufm	100	93.142	ENSANAG00000022206	TUFM	99	93.142	Aotus_nancymaae
ENSRNOG00000018604	Tufm	91	79.075	ENSACLG00000007403	tufm	93	74.723	Astatotilapia_calliptera
ENSRNOG00000018604	Tufm	100	95.354	ENSBTAG00000019216	TUFM	100	95.354	Bos_taurus
ENSRNOG00000018604	Tufm	91	56.295	WBGene00007000	tufm-1	84	56.295	Caenorhabditis_elegans
ENSRNOG00000018604	Tufm	100	93.363	ENSCJAG00000006236	TUFM	99	93.363	Callithrix_jacchus
ENSRNOG00000018604	Tufm	100	95.354	ENSCAFG00000017216	TUFM	100	95.354	Canis_familiaris
ENSRNOG00000018604	Tufm	100	95.354	ENSCAFG00020017574	TUFM	100	95.354	Canis_lupus_dingo
ENSRNOG00000018604	Tufm	100	95.575	ENSCHIG00000020583	TUFM	100	95.575	Capra_hircus
ENSRNOG00000018604	Tufm	99	95.565	ENSTSYG00000026053	TUFM	99	95.565	Carlito_syrichta
ENSRNOG00000018604	Tufm	100	96.239	ENSCPOG00000010534	TUFM	100	96.239	Cavia_porcellus
ENSRNOG00000018604	Tufm	100	92.920	ENSCCAG00000033296	TUFM	99	92.920	Cebus_capucinus
ENSRNOG00000018604	Tufm	100	93.584	ENSCATG00000035822	TUFM	99	93.584	Cercocebus_atys
ENSRNOG00000018604	Tufm	100	95.133	ENSCLAG00000013969	TUFM	100	95.133	Chinchilla_lanigera
ENSRNOG00000018604	Tufm	100	93.584	ENSCSAG00000006314	TUFM	99	93.584	Chlorocebus_sabaeus
ENSRNOG00000018604	Tufm	99	94.235	ENSCHOG00000009077	TUFM	99	94.235	Choloepus_hoffmanni
ENSRNOG00000018604	Tufm	92	81.340	ENSCPBG00000003874	TUFM	91	81.340	Chrysemys_picta_bellii
ENSRNOG00000018604	Tufm	89	58.706	ENSCING00000002841	-	93	58.706	Ciona_intestinalis
ENSRNOG00000018604	Tufm	90	56.235	ENSCSAVG00000009380	-	89	56.235	Ciona_savignyi
ENSRNOG00000018604	Tufm	99	93.792	ENSCANG00000035829	TUFM	99	93.792	Colobus_angolensis_palliatus
ENSRNOG00000018604	Tufm	100	97.788	ENSCGRG00001022949	Tufm	100	97.788	Cricetulus_griseus_chok1gshd
ENSRNOG00000018604	Tufm	100	97.788	ENSCGRG00000001868	-	100	97.788	Cricetulus_griseus_crigri
ENSRNOG00000018604	Tufm	100	68.640	ENSCGRG00000013193	-	100	68.640	Cricetulus_griseus_crigri
ENSRNOG00000018604	Tufm	92	76.978	ENSCSEG00000013841	tufm	97	76.978	Cynoglossus_semilaevis
ENSRNOG00000018604	Tufm	99	74.723	ENSCVAG00000006251	tufm	98	78.282	Cyprinodon_variegatus
ENSRNOG00000018604	Tufm	99	73.154	ENSDARG00000104173	tufm	99	73.154	Danio_rerio
ENSRNOG00000018604	Tufm	99	91.796	ENSDNOG00000047636	TUFM	99	91.796	Dasypus_novemcinctus
ENSRNOG00000018604	Tufm	100	75.885	ENSDORG00000023544	-	100	75.885	Dipodomys_ordii
ENSRNOG00000018604	Tufm	89	67.662	FBgn0024556	mEFTu1	82	67.662	Drosophila_melanogaster
ENSRNOG00000018604	Tufm	87	80.506	ENSETEG00000009601	TUFM	99	80.506	Echinops_telfairi
ENSRNOG00000018604	Tufm	96	67.742	ENSEBUG00000015907	tufm	71	67.972	Eptatretus_burgeri
ENSRNOG00000018604	Tufm	100	96.239	ENSEASG00005015477	TUFM	99	96.239	Equus_asinus_asinus
ENSRNOG00000018604	Tufm	100	96.239	ENSECAG00000019763	TUFM	100	96.239	Equus_caballus
ENSRNOG00000018604	Tufm	87	90.380	ENSEEUG00000001402	TUFM	99	90.380	Erinaceus_europaeus
ENSRNOG00000018604	Tufm	99	75.717	ENSELUG00000013410	tufm	96	75.717	Esox_lucius
ENSRNOG00000018604	Tufm	99	95.302	ENSFCAG00000003103	TUFM	65	95.133	Felis_catus
ENSRNOG00000018604	Tufm	88	90.226	ENSFDAG00000010881	TUFM	100	93.671	Fukomys_damarensis
ENSRNOG00000018604	Tufm	92	72.902	ENSFHEG00000020646	tufm	98	69.731	Fundulus_heteroclitus
ENSRNOG00000018604	Tufm	99	75.610	ENSGMOG00000014616	tufm	99	75.610	Gadus_morhua
ENSRNOG00000018604	Tufm	99	74.723	ENSGAFG00000004682	tufm	98	77.435	Gambusia_affinis
ENSRNOG00000018604	Tufm	93	78.385	ENSGACG00000012961	tufm	99	75.610	Gasterosteus_aculeatus
ENSRNOG00000018604	Tufm	99	79.065	ENSGAGG00000006132	TUFM	99	83.375	Gopherus_agassizii
ENSRNOG00000018604	Tufm	99	93.792	ENSGGOG00000014136	TUFM	99	93.792	Gorilla_gorilla
ENSRNOG00000018604	Tufm	93	77.910	ENSHBUG00000019031	tufm	90	78.417	Haplochromis_burtoni
ENSRNOG00000018604	Tufm	99	93.348	ENSHGLG00000006613	TUFM	99	93.348	Heterocephalus_glaber_female
ENSRNOG00000018604	Tufm	99	89.579	ENSHGLG00100004096	TUFM	99	89.579	Heterocephalus_glaber_male
ENSRNOG00000018604	Tufm	99	76.063	ENSHCOG00000014418	tufm	99	78.738	Hippocampus_comes
ENSRNOG00000018604	Tufm	93	78.333	ENSIPUG00000022457	tufm	99	74.945	Ictalurus_punctatus
ENSRNOG00000018604	Tufm	98	42.325	ENSIPUG00000020682	-	89	50.476	Ictalurus_punctatus
ENSRNOG00000018604	Tufm	100	96.018	ENSSTOG00000011837	TUFM	100	96.018	Ictidomys_tridecemlineatus
ENSRNOG00000018604	Tufm	100	95.796	ENSJJAG00000011840	Tufm	100	95.796	Jaculus_jaculus
ENSRNOG00000018604	Tufm	99	75.610	ENSKMAG00000009794	tufm	99	75.610	Kryptolebias_marmoratus
ENSRNOG00000018604	Tufm	92	77.938	ENSLBEG00000023735	tufm	97	77.938	Labrus_bergylta
ENSRNOG00000018604	Tufm	91	79.854	ENSLACG00000008242	TUFM	91	79.854	Latimeria_chalumnae
ENSRNOG00000018604	Tufm	99	91.480	ENSLAFG00000028911	TUFM	99	91.480	Loxodonta_africana
ENSRNOG00000018604	Tufm	99	93.570	ENSMFAG00000033739	TUFM	99	93.570	Macaca_fascicularis
ENSRNOG00000018604	Tufm	99	93.792	ENSMMUG00000003303	TUFM	99	93.792	Macaca_mulatta
ENSRNOG00000018604	Tufm	99	93.792	ENSMNEG00000006031	TUFM	99	93.792	Macaca_nemestrina
ENSRNOG00000018604	Tufm	100	93.584	ENSMLEG00000042133	TUFM	99	93.584	Mandrillus_leucophaeus
ENSRNOG00000018604	Tufm	93	78.385	ENSMAMG00000002053	tufm	99	75.610	Mastacembelus_armatus
ENSRNOG00000018604	Tufm	93	77.910	ENSMZEG00005010857	tufm	93	74.945	Maylandia_zebra
ENSRNOG00000018604	Tufm	100	97.788	ENSMAUG00000010490	Tufm	100	97.788	Mesocricetus_auratus
ENSRNOG00000018604	Tufm	100	94.248	ENSMICG00000007650	TUFM	100	94.248	Microcebus_murinus
ENSRNOG00000018604	Tufm	100	97.566	ENSMOCG00000010051	Tufm	100	97.566	Microtus_ochrogaster
ENSRNOG00000018604	Tufm	98	73.923	ENSMMOG00000012344	tufm	96	73.923	Mola_mola
ENSRNOG00000018604	Tufm	99	86.860	ENSMODG00000015564	TUFM	99	86.860	Monodelphis_domestica
ENSRNOG00000018604	Tufm	99	74.049	ENSMALG00000020254	tufm	99	74.049	Monopterus_albus
ENSRNOG00000018604	Tufm	100	99.336	MGP_CAROLIEiJ_G0030449	-	100	99.336	Mus_caroli
ENSRNOG00000018604	Tufm	100	99.336	MGP_CAROLIEiJ_G0030448	-	100	99.336	Mus_caroli
ENSRNOG00000018604	Tufm	100	99.779	ENSMUSG00000073838	Tufm	100	99.779	Mus_musculus
ENSRNOG00000018604	Tufm	100	100.000	MGP_PahariEiJ_G0013658	-	100	100.000	Mus_pahari
ENSRNOG00000018604	Tufm	100	100.000	MGP_PahariEiJ_G0013659	-	100	100.000	Mus_pahari
ENSRNOG00000018604	Tufm	100	91.820	MGP_SPRETEiJ_G0031563	-	100	91.820	Mus_spretus
ENSRNOG00000018604	Tufm	100	99.336	MGP_SPRETEiJ_G0031562	-	100	99.336	Mus_spretus
ENSRNOG00000018604	Tufm	82	96.765	ENSMPUG00000012816	TUFM	98	96.765	Mustela_putorius_furo
ENSRNOG00000018604	Tufm	100	95.575	ENSMLUG00000012335	-	100	95.575	Myotis_lucifugus
ENSRNOG00000018604	Tufm	100	97.345	ENSNGAG00000008610	Tufm	100	97.345	Nannospalax_galili
ENSRNOG00000018604	Tufm	81	78.356	ENSNBRG00000006466	tufm	96	78.729	Neolamprologus_brichardi
ENSRNOG00000018604	Tufm	99	89.159	ENSNLEG00000011063	TUFM	99	89.159	Nomascus_leucogenys
ENSRNOG00000018604	Tufm	77	91.354	ENSMEUG00000011131	TUFM	100	91.354	Notamacropus_eugenii
ENSRNOG00000018604	Tufm	99	82.927	ENSOPRG00000002318	-	99	82.927	Ochotona_princeps
ENSRNOG00000018604	Tufm	93	78.147	ENSONIG00000019389	tufm	99	75.166	Oreochromis_niloticus
ENSRNOG00000018604	Tufm	96	87.586	ENSOANG00000013114	TUFM	99	87.586	Ornithorhynchus_anatinus
ENSRNOG00000018604	Tufm	98	95.730	ENSOCUG00000002683	TUFM	99	95.585	Oryctolagus_cuniculus
ENSRNOG00000018604	Tufm	99	73.836	ENSORLG00000011497	tufm	99	73.836	Oryzias_latipes
ENSRNOG00000018604	Tufm	99	74.058	ENSORLG00020013437	tufm	99	74.058	Oryzias_latipes_hni
ENSRNOG00000018604	Tufm	99	73.836	ENSORLG00015003107	tufm	99	73.836	Oryzias_latipes_hsok
ENSRNOG00000018604	Tufm	99	74.501	ENSOMEG00000016958	tufm	99	74.501	Oryzias_melastigma
ENSRNOG00000018604	Tufm	100	94.248	ENSOGAG00000006875	TUFM	100	94.248	Otolemur_garnettii
ENSRNOG00000018604	Tufm	92	95.169	ENSOARG00000002357	TUFM	100	95.169	Ovis_aries
ENSRNOG00000018604	Tufm	99	93.792	ENSPPAG00000035168	TUFM	99	93.792	Pan_paniscus
ENSRNOG00000018604	Tufm	98	95.281	ENSPPRG00000014248	TUFM	99	95.133	Panthera_pardus
ENSRNOG00000018604	Tufm	93	95.735	ENSPTIG00000009980	TUFM	99	95.735	Panthera_tigris_altaica
ENSRNOG00000018604	Tufm	99	94.013	ENSPTRG00000007939	TUFM	99	94.013	Pan_troglodytes
ENSRNOG00000018604	Tufm	99	94.013	ENSPANG00000019624	TUFM	99	94.013	Papio_anubis
ENSRNOG00000018604	Tufm	93	76.540	ENSPKIG00000023809	tufm	93	76.540	Paramormyrops_kingsleyae
ENSRNOG00000018604	Tufm	67	81.728	ENSPSIG00000005302	TUFM	96	81.728	Pelodiscus_sinensis
ENSRNOG00000018604	Tufm	92	77.458	ENSPMGG00000015631	tufm	99	77.458	Periophthalmus_magnuspinnatus
ENSRNOG00000018604	Tufm	100	98.230	ENSPEMG00000012208	Tufm	100	98.230	Peromyscus_maniculatus_bairdii
ENSRNOG00000018604	Tufm	100	85.088	ENSPCIG00000025208	TUFM	100	85.088	Phascolarctos_cinereus
ENSRNOG00000018604	Tufm	99	73.661	ENSPFOG00000007043	tufm	99	73.661	Poecilia_formosa
ENSRNOG00000018604	Tufm	96	75.339	ENSPLAG00000014372	tufm	99	75.339	Poecilia_latipinna
ENSRNOG00000018604	Tufm	99	73.661	ENSPMEG00000019508	tufm	99	75.113	Poecilia_mexicana
ENSRNOG00000018604	Tufm	99	73.884	ENSPMEG00000014520	-	99	73.884	Poecilia_mexicana
ENSRNOG00000018604	Tufm	93	76.960	ENSPREG00000013913	tufm	99	74.279	Poecilia_reticulata
ENSRNOG00000018604	Tufm	100	93.142	ENSPPYG00000007226	TUFM	99	93.142	Pongo_abelii
ENSRNOG00000018604	Tufm	99	86.504	ENSPCAG00000015294	TUFM	99	86.504	Procavia_capensis
ENSRNOG00000018604	Tufm	100	94.248	ENSPCOG00000012267	TUFM	99	94.248	Propithecus_coquereli
ENSRNOG00000018604	Tufm	50	95.238	ENSPVAG00000003960	-	50	95.238	Pteropus_vampyrus
ENSRNOG00000018604	Tufm	92	78.177	ENSPNYG00000008905	tufm	99	75.168	Pundamilia_nyererei
ENSRNOG00000018604	Tufm	92	78.897	ENSPNAG00000018881	tufm	99	75.388	Pygocentrus_nattereri
ENSRNOG00000018604	Tufm	56	94.882	ENSRBIG00000036713	-	93	94.882	Rhinopithecus_bieti
ENSRNOG00000018604	Tufm	99	89.381	ENSRBIG00000042008	-	99	89.381	Rhinopithecus_bieti
ENSRNOG00000018604	Tufm	67	92.409	ENSRROG00000044977	-	82	92.409	Rhinopithecus_roxellana
ENSRNOG00000018604	Tufm	99	93.792	ENSRROG00000036858	-	99	93.792	Rhinopithecus_roxellana
ENSRNOG00000018604	Tufm	86	61.168	YOR187W	TUF1	90	61.168	Saccharomyces_cerevisiae
ENSRNOG00000018604	Tufm	99	91.537	ENSSBOG00000026542	TUFM	99	91.537	Saimiri_boliviensis_boliviensis
ENSRNOG00000018604	Tufm	95	89.120	ENSSHAG00000012121	TUFM	100	89.120	Sarcophilus_harrisii
ENSRNOG00000018604	Tufm	92	76.739	ENSSFOG00015013352	tufm	94	76.739	Scleropages_formosus
ENSRNOG00000018604	Tufm	99	75.388	ENSSMAG00000010053	tufm	99	75.388	Scophthalmus_maximus
ENSRNOG00000018604	Tufm	92	78.177	ENSSDUG00000016896	tufm	99	74.945	Seriola_dumerili
ENSRNOG00000018604	Tufm	96	76.082	ENSSLDG00000006494	tufm	99	76.082	Seriola_lalandi_dorsalis
ENSRNOG00000018604	Tufm	84	94.737	ENSSARG00000011228	TUFM	100	94.737	Sorex_araneus
ENSRNOG00000018604	Tufm	92	72.662	ENSSPUG00000016312	TUFM	96	72.662	Sphenodon_punctatus
ENSRNOG00000018604	Tufm	96	76.498	ENSSPAG00000009936	tufm	98	75.561	Stegastes_partitus
ENSRNOG00000018604	Tufm	100	95.575	ENSSSCG00000007803	TUFM	100	95.575	Sus_scrofa
ENSRNOG00000018604	Tufm	99	74.945	ENSTRUG00000008300	tufm	99	74.945	Takifugu_rubripes
ENSRNOG00000018604	Tufm	100	90.769	ENSTBEG00000015029	TUFM	99	91.429	Tupaia_belangeri
ENSRNOG00000018604	Tufm	57	94.186	ENSTTRG00000005930	-	57	94.186	Tursiops_truncatus
ENSRNOG00000018604	Tufm	61	96.000	ENSTTRG00000001980	-	100	96.000	Tursiops_truncatus
ENSRNOG00000018604	Tufm	99	94.013	ENSUAMG00000001471	TUFM	99	94.013	Ursus_americanus
ENSRNOG00000018604	Tufm	90	96.790	ENSUMAG00000009341	TUFM	99	96.790	Ursus_maritimus
ENSRNOG00000018604	Tufm	61	95.636	ENSVPAG00000009541	TUFM	100	95.636	Vicugna_pacos
ENSRNOG00000018604	Tufm	100	95.354	ENSVVUG00000024170	TUFM	100	95.354	Vulpes_vulpes
ENSRNOG00000018604	Tufm	83	48.446	ENSXETG00000028019	-	68	85.106	Xenopus_tropicalis
ENSRNOG00000018604	Tufm	92	77.938	ENSXMAG00000011848	tufm	96	77.938	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	ISO	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	21350184.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006414	translational elongation	21873635.	IBA	Process
GO:0006414	translational elongation	-	ISO	Process
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0045202	synapse	14532281.	EXP	Component
GO:0045202	synapse	14532281.	IDA	Component
GO:0045471	response to ethanol	21350184.	IEP	Process
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process