EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018647 (Gene tree)
Gene ID: 680747
Gene Symbol: Mrpl20
Alias: LOC680747
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4531 bases
Position: chr5:173248245-173252775
Accession: 1588219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025213	Ribosomal_L20	PF00453.18	3.7e-35	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025213	-	759	-	ENSRNOP00000025213	149 (aa)	-	B2GV62

Gene Model

Click here to download ENSRNOG00000018647's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018647	Mrpl20	100	86.577	ENSG00000242485	MRPL20	100	86.577	Homo_sapiens
ENSRNOG00000018647	Mrpl20	98	69.178	ENSAPOG00000011835	mrpl20	98	69.178	Acanthochromis_polyacanthus
ENSRNOG00000018647	Mrpl20	93	89.928	ENSAMEG00000013932	MRPL20	93	89.928	Ailuropoda_melanoleuca
ENSRNOG00000018647	Mrpl20	98	69.863	ENSACIG00000019179	mrpl20	98	69.863	Amphilophus_citrinellus
ENSRNOG00000018647	Mrpl20	98	69.178	ENSAOCG00000007734	mrpl20	98	69.178	Amphiprion_ocellaris
ENSRNOG00000018647	Mrpl20	98	68.493	ENSAPEG00000014049	mrpl20	98	68.493	Amphiprion_percula
ENSRNOG00000018647	Mrpl20	98	69.178	ENSATEG00000007369	mrpl20	98	69.178	Anabas_testudineus
ENSRNOG00000018647	Mrpl20	99	70.946	ENSACAG00000009143	MRPL20	99	70.946	Anolis_carolinensis
ENSRNOG00000018647	Mrpl20	100	78.947	ENSANAG00000021078	-	100	78.947	Aotus_nancymaae
ENSRNOG00000018647	Mrpl20	91	68.889	ENSACLG00000021726	mrpl20	87	68.889	Astatotilapia_calliptera
ENSRNOG00000018647	Mrpl20	79	67.797	ENSAMXG00000035403	mrpl20	84	67.797	Astyanax_mexicanus
ENSRNOG00000018647	Mrpl20	100	87.248	ENSBTAG00000004872	MRPL20	75	87.248	Bos_taurus
ENSRNOG00000018647	Mrpl20	100	86.577	ENSCJAG00000039231	-	100	86.577	Callithrix_jacchus
ENSRNOG00000018647	Mrpl20	100	88.591	ENSCAFG00000019259	MRPL20	100	88.591	Canis_familiaris
ENSRNOG00000018647	Mrpl20	74	84.685	ENSCAFG00020025880	-	65	84.685	Canis_lupus_dingo
ENSRNOG00000018647	Mrpl20	100	87.248	ENSCHIG00000010545	MRPL20	100	87.248	Capra_hircus
ENSRNOG00000018647	Mrpl20	100	91.275	ENSTSYG00000033620	MRPL20	100	91.275	Carlito_syrichta
ENSRNOG00000018647	Mrpl20	100	89.933	ENSCPOG00000023001	MRPL20	100	89.933	Cavia_porcellus
ENSRNOG00000018647	Mrpl20	100	87.919	ENSCCAG00000032768	-	100	87.919	Cebus_capucinus
ENSRNOG00000018647	Mrpl20	100	87.248	ENSCATG00000033927	MRPL20	100	87.248	Cercocebus_atys
ENSRNOG00000018647	Mrpl20	86	75.781	ENSCATG00000040437	-	67	75.781	Cercocebus_atys
ENSRNOG00000018647	Mrpl20	100	58.389	ENSCLAG00000011866	-	100	58.389	Chinchilla_lanigera
ENSRNOG00000018647	Mrpl20	100	87.919	ENSCLAG00000009757	-	100	87.919	Chinchilla_lanigera
ENSRNOG00000018647	Mrpl20	100	86.577	ENSCSAG00000019479	-	100	86.577	Chlorocebus_sabaeus
ENSRNOG00000018647	Mrpl20	100	87.248	ENSCSAG00000000688	-	100	87.248	Chlorocebus_sabaeus
ENSRNOG00000018647	Mrpl20	100	76.510	ENSCPBG00000022905	MRPL20	100	76.510	Chrysemys_picta_bellii
ENSRNOG00000018647	Mrpl20	100	69.128	ENSCANG00000039625	MRPL20	100	69.128	Colobus_angolensis_palliatus
ENSRNOG00000018647	Mrpl20	100	94.631	ENSCGRG00001024028	Mrpl20	100	94.631	Cricetulus_griseus_chok1gshd
ENSRNOG00000018647	Mrpl20	100	94.631	ENSCGRG00000007447	Mrpl20	100	94.631	Cricetulus_griseus_crigri
ENSRNOG00000018647	Mrpl20	98	69.178	ENSCSEG00000002016	mrpl20	85	69.178	Cynoglossus_semilaevis
ENSRNOG00000018647	Mrpl20	98	66.438	ENSCVAG00000022768	mrpl20	99	66.438	Cyprinodon_variegatus
ENSRNOG00000018647	Mrpl20	100	61.745	ENSDARG00000090462	mrpl20	100	61.745	Danio_rerio
ENSRNOG00000018647	Mrpl20	99	85.811	ENSDNOG00000044958	MRPL20	99	85.811	Dasypus_novemcinctus
ENSRNOG00000018647	Mrpl20	56	93.976	ENSDORG00000028591	Mrpl20	100	93.976	Dipodomys_ordii
ENSRNOG00000018647	Mrpl20	83	39.024	FBgn0036335	mRpL20	82	39.024	Drosophila_melanogaster
ENSRNOG00000018647	Mrpl20	99	70.270	ENSETEG00000012315	MRPL20	99	70.270	Echinops_telfairi
ENSRNOG00000018647	Mrpl20	99	65.306	ENSEBUG00000002214	mrpl20	99	65.306	Eptatretus_burgeri
ENSRNOG00000018647	Mrpl20	100	87.919	ENSEASG00005014515	MRPL20	100	87.919	Equus_asinus_asinus
ENSRNOG00000018647	Mrpl20	100	87.919	ENSECAG00000018364	MRPL20	100	87.919	Equus_caballus
ENSRNOG00000018647	Mrpl20	81	67.500	ENSEEUG00000004596	-	100	67.500	Erinaceus_europaeus
ENSRNOG00000018647	Mrpl20	98	70.548	ENSELUG00000013398	mrpl20	98	70.548	Esox_lucius
ENSRNOG00000018647	Mrpl20	99	88.435	ENSFCAG00000033203	MRPL20	99	88.435	Felis_catus
ENSRNOG00000018647	Mrpl20	100	69.799	ENSFALG00000009334	MRPL20	100	69.799	Ficedula_albicollis
ENSRNOG00000018647	Mrpl20	100	88.591	ENSFDAG00000013320	MRPL20	100	88.591	Fukomys_damarensis
ENSRNOG00000018647	Mrpl20	98	65.753	ENSFHEG00000004769	mrpl20	99	65.753	Fundulus_heteroclitus
ENSRNOG00000018647	Mrpl20	97	65.972	ENSGMOG00000008125	mrpl20	100	65.972	Gadus_morhua
ENSRNOG00000018647	Mrpl20	100	75.839	ENSGALG00000001542	MRPL20	100	75.839	Gallus_gallus
ENSRNOG00000018647	Mrpl20	98	68.493	ENSGAFG00000021580	mrpl20	99	68.493	Gambusia_affinis
ENSRNOG00000018647	Mrpl20	98	69.178	ENSGACG00000001134	mrpl20	98	69.178	Gasterosteus_aculeatus
ENSRNOG00000018647	Mrpl20	100	75.839	ENSGAGG00000001945	MRPL20	100	75.839	Gopherus_agassizii
ENSRNOG00000018647	Mrpl20	100	86.577	ENSGGOG00000027251	-	100	86.577	Gorilla_gorilla
ENSRNOG00000018647	Mrpl20	98	68.493	ENSHBUG00000023626	mrpl20	98	68.493	Haplochromis_burtoni
ENSRNOG00000018647	Mrpl20	100	86.577	ENSHGLG00000017538	MRPL20	100	86.577	Heterocephalus_glaber_female
ENSRNOG00000018647	Mrpl20	100	87.248	ENSHGLG00100012816	MRPL20	100	87.248	Heterocephalus_glaber_male
ENSRNOG00000018647	Mrpl20	98	63.699	ENSHCOG00000005830	mrpl20	98	63.699	Hippocampus_comes
ENSRNOG00000018647	Mrpl20	99	65.306	ENSIPUG00000018055	mrpl20	99	65.306	Ictalurus_punctatus
ENSRNOG00000018647	Mrpl20	100	91.275	ENSJJAG00000020728	Mrpl20	100	91.275	Jaculus_jaculus
ENSRNOG00000018647	Mrpl20	98	69.178	ENSKMAG00000021650	mrpl20	98	69.178	Kryptolebias_marmoratus
ENSRNOG00000018647	Mrpl20	98	69.178	ENSLBEG00000021562	mrpl20	98	69.178	Labrus_bergylta
ENSRNOG00000018647	Mrpl20	100	77.852	ENSLACG00000019149	MRPL20	100	77.852	Latimeria_chalumnae
ENSRNOG00000018647	Mrpl20	99	89.189	ENSLAFG00000010706	MRPL20	99	89.189	Loxodonta_africana
ENSRNOG00000018647	Mrpl20	94	74.286	ENSMFAG00000046195	-	83	74.286	Macaca_fascicularis
ENSRNOG00000018647	Mrpl20	100	87.248	ENSMFAG00000043214	MRPL20	100	87.248	Macaca_fascicularis
ENSRNOG00000018647	Mrpl20	96	60.690	ENSMMUG00000038877	MRPL20	99	60.690	Macaca_mulatta
ENSRNOG00000018647	Mrpl20	100	87.248	ENSMNEG00000041891	MRPL20	100	87.248	Macaca_nemestrina
ENSRNOG00000018647	Mrpl20	89	75.940	ENSMNEG00000000027	-	68	75.940	Macaca_nemestrina
ENSRNOG00000018647	Mrpl20	81	89.167	ENSMLEG00000037086	MRPL20	100	89.167	Mandrillus_leucophaeus
ENSRNOG00000018647	Mrpl20	91	74.074	ENSMLEG00000037605	-	83	74.074	Mandrillus_leucophaeus
ENSRNOG00000018647	Mrpl20	98	70.548	ENSMAMG00000023884	mrpl20	98	70.548	Mastacembelus_armatus
ENSRNOG00000018647	Mrpl20	98	68.493	ENSMZEG00005011376	mrpl20	98	68.493	Maylandia_zebra
ENSRNOG00000018647	Mrpl20	81	75.833	ENSMGAG00000002774	MRPL20	81	75.833	Meleagris_gallopavo
ENSRNOG00000018647	Mrpl20	100	93.289	ENSMAUG00000013299	Mrpl20	100	93.289	Mesocricetus_auratus
ENSRNOG00000018647	Mrpl20	100	89.262	ENSMICG00000041892	MRPL20	100	89.262	Microcebus_murinus
ENSRNOG00000018647	Mrpl20	100	87.919	ENSMOCG00000009545	-	100	87.919	Microtus_ochrogaster
ENSRNOG00000018647	Mrpl20	100	93.960	ENSMOCG00000000404	-	100	93.960	Microtus_ochrogaster
ENSRNOG00000018647	Mrpl20	98	50.685	ENSMMOG00000021753	mrpl20	97	50.685	Mola_mola
ENSRNOG00000018647	Mrpl20	100	78.523	ENSMODG00000006562	MRPL20	100	78.523	Monodelphis_domestica
ENSRNOG00000018647	Mrpl20	98	68.493	ENSMALG00000018593	mrpl20	98	68.493	Monopterus_albus
ENSRNOG00000018647	Mrpl20	100	96.644	MGP_CAROLIEiJ_G0026904	Mrpl20	100	96.644	Mus_caroli
ENSRNOG00000018647	Mrpl20	100	95.973	ENSMUSG00000029066	Mrpl20	100	95.973	Mus_musculus
ENSRNOG00000018647	Mrpl20	100	93.960	MGP_PahariEiJ_G0029252	Mrpl20	100	93.960	Mus_pahari
ENSRNOG00000018647	Mrpl20	100	95.973	MGP_SPRETEiJ_G0027898	Mrpl20	100	95.973	Mus_spretus
ENSRNOG00000018647	Mrpl20	100	88.591	ENSMLUG00000011857	MRPL20	100	88.591	Myotis_lucifugus
ENSRNOG00000018647	Mrpl20	100	94.631	ENSNGAG00000021688	Mrpl20	100	94.631	Nannospalax_galili
ENSRNOG00000018647	Mrpl20	98	68.493	ENSNBRG00000006018	mrpl20	98	68.493	Neolamprologus_brichardi
ENSRNOG00000018647	Mrpl20	58	89.535	ENSNLEG00000013868	-	84	89.535	Nomascus_leucogenys
ENSRNOG00000018647	Mrpl20	100	89.262	ENSODEG00000010734	MRPL20	100	89.262	Octodon_degus
ENSRNOG00000018647	Mrpl20	98	69.178	ENSONIG00000018914	mrpl20	98	69.178	Oreochromis_niloticus
ENSRNOG00000018647	Mrpl20	98	69.863	ENSORLG00000018304	mrpl20	98	69.863	Oryzias_latipes
ENSRNOG00000018647	Mrpl20	98	69.863	ENSORLG00020009128	mrpl20	98	69.863	Oryzias_latipes_hni
ENSRNOG00000018647	Mrpl20	98	69.863	ENSORLG00015005156	mrpl20	98	69.863	Oryzias_latipes_hsok
ENSRNOG00000018647	Mrpl20	98	70.548	ENSOMEG00000015654	mrpl20	98	70.548	Oryzias_melastigma
ENSRNOG00000018647	Mrpl20	100	89.262	ENSOGAG00000005968	MRPL20	100	89.262	Otolemur_garnettii
ENSRNOG00000018647	Mrpl20	100	87.248	ENSOARG00000003529	MRPL20	100	87.248	Ovis_aries
ENSRNOG00000018647	Mrpl20	100	86.577	ENSPPAG00000042350	-	100	86.577	Pan_paniscus
ENSRNOG00000018647	Mrpl20	99	89.116	ENSPPRG00000009188	MRPL20	99	89.116	Panthera_pardus
ENSRNOG00000018647	Mrpl20	91	64.706	ENSPTIG00000020769	MRPL20	89	92.593	Panthera_tigris_altaica
ENSRNOG00000018647	Mrpl20	100	86.577	ENSPTRG00000000029	MRPL20	100	86.577	Pan_troglodytes
ENSRNOG00000018647	Mrpl20	100	87.248	ENSPANG00000015802	MRPL20	100	87.248	Papio_anubis
ENSRNOG00000018647	Mrpl20	94	73.571	ENSPANG00000036197	-	100	73.571	Papio_anubis
ENSRNOG00000018647	Mrpl20	100	65.101	ENSPKIG00000002248	mrpl20	100	65.101	Paramormyrops_kingsleyae
ENSRNOG00000018647	Mrpl20	95	69.014	ENSPSIG00000003939	MRPL20	100	69.014	Pelodiscus_sinensis
ENSRNOG00000018647	Mrpl20	98	69.863	ENSPMGG00000003966	mrpl20	98	69.863	Periophthalmus_magnuspinnatus
ENSRNOG00000018647	Mrpl20	51	37.179	ENSPMGG00000022271	-	55	37.179	Periophthalmus_magnuspinnatus
ENSRNOG00000018647	Mrpl20	100	73.154	ENSPEMG00000009458	-	85	73.154	Peromyscus_maniculatus_bairdii
ENSRNOG00000018647	Mrpl20	63	40.426	ENSPMAG00000009990	-	75	40.000	Petromyzon_marinus
ENSRNOG00000018647	Mrpl20	100	79.866	ENSPCIG00000007747	MRPL20	100	79.866	Phascolarctos_cinereus
ENSRNOG00000018647	Mrpl20	98	67.808	ENSPFOG00000018163	mrpl20	99	67.808	Poecilia_formosa
ENSRNOG00000018647	Mrpl20	98	67.808	ENSPLAG00000016451	mrpl20	99	67.808	Poecilia_latipinna
ENSRNOG00000018647	Mrpl20	98	67.808	ENSPMEG00000002561	mrpl20	99	67.808	Poecilia_mexicana
ENSRNOG00000018647	Mrpl20	98	61.905	ENSPREG00000004925	mrpl20	99	61.905	Poecilia_reticulata
ENSRNOG00000018647	Mrpl20	99	87.838	ENSPCAG00000001425	MRPL20	99	87.838	Procavia_capensis
ENSRNOG00000018647	Mrpl20	99	78.378	ENSPCOG00000004450	-	99	78.378	Propithecus_coquereli
ENSRNOG00000018647	Mrpl20	100	87.248	ENSPCOG00000025653	-	100	87.248	Propithecus_coquereli
ENSRNOG00000018647	Mrpl20	98	68.493	ENSPNYG00000008626	mrpl20	98	68.493	Pundamilia_nyererei
ENSRNOG00000018647	Mrpl20	99	65.306	ENSPNAG00000016694	mrpl20	99	65.306	Pygocentrus_nattereri
ENSRNOG00000018647	Mrpl20	100	87.919	ENSRBIG00000042278	MRPL20	100	87.919	Rhinopithecus_bieti
ENSRNOG00000018647	Mrpl20	100	87.919	ENSRROG00000003574	MRPL20	100	87.919	Rhinopithecus_roxellana
ENSRNOG00000018647	Mrpl20	56	87.952	ENSSBOG00000035454	-	100	87.952	Saimiri_boliviensis_boliviensis
ENSRNOG00000018647	Mrpl20	100	70.323	ENSSHAG00000008197	MRPL20	100	70.323	Sarcophilus_harrisii
ENSRNOG00000018647	Mrpl20	100	65.772	ENSSFOG00015016009	mrpl20	100	65.772	Scleropages_formosus
ENSRNOG00000018647	Mrpl20	98	71.233	ENSSMAG00000000214	mrpl20	98	71.233	Scophthalmus_maximus
ENSRNOG00000018647	Mrpl20	98	70.548	ENSSDUG00000008646	mrpl20	98	70.548	Seriola_dumerili
ENSRNOG00000018647	Mrpl20	98	70.548	ENSSLDG00000023171	mrpl20	98	70.548	Seriola_lalandi_dorsalis
ENSRNOG00000018647	Mrpl20	100	68.456	ENSSPUG00000016911	MRPL20	100	68.456	Sphenodon_punctatus
ENSRNOG00000018647	Mrpl20	98	69.178	ENSSPAG00000012887	mrpl20	98	69.178	Stegastes_partitus
ENSRNOG00000018647	Mrpl20	99	89.189	ENSSSCG00000033374	MRPL20	99	89.189	Sus_scrofa
ENSRNOG00000018647	Mrpl20	81	75.000	ENSTGUG00000003113	MRPL20	98	75.000	Taeniopygia_guttata
ENSRNOG00000018647	Mrpl20	97	68.276	ENSTRUG00000021410	mrpl20	97	68.276	Takifugu_rubripes
ENSRNOG00000018647	Mrpl20	100	69.128	ENSTNIG00000014657	mrpl20	100	69.128	Tetraodon_nigroviridis
ENSRNOG00000018647	Mrpl20	100	90.604	ENSTBEG00000008735	MRPL20	100	90.604	Tupaia_belangeri
ENSRNOG00000018647	Mrpl20	80	89.916	ENSTTRG00000017046	MRPL20	99	89.916	Tursiops_truncatus
ENSRNOG00000018647	Mrpl20	100	89.933	ENSUAMG00000012829	-	100	89.933	Ursus_americanus
ENSRNOG00000018647	Mrpl20	82	72.131	ENSUAMG00000028406	-	79	72.131	Ursus_americanus
ENSRNOG00000018647	Mrpl20	58	89.535	ENSUMAG00000001917	-	75	89.535	Ursus_maritimus
ENSRNOG00000018647	Mrpl20	82	72.131	ENSUMAG00000003240	-	79	72.131	Ursus_maritimus
ENSRNOG00000018647	Mrpl20	56	87.952	ENSVPAG00000001846	-	100	87.952	Vicugna_pacos
ENSRNOG00000018647	Mrpl20	100	89.262	ENSVVUG00000004455	MRPL20	100	89.262	Vulpes_vulpes
ENSRNOG00000018647	Mrpl20	100	71.812	ENSXETG00000011118	mrpl20	100	71.812	Xenopus_tropicalis
ENSRNOG00000018647	Mrpl20	98	66.438	ENSXCOG00000004220	mrpl20	99	66.438	Xiphophorus_couchianus
ENSRNOG00000018647	Mrpl20	98	66.438	ENSXMAG00000016652	mrpl20	99	66.438	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005761	mitochondrial ribosome	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	IEA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0019843	rRNA binding	-	IEA	Function