EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018686 (Gene tree)
Gene ID: 361649
Gene Symbol: Atxn2l
Alias: LOC361649|RGD1565868
Full Name: ataxin 2-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 11467 bases
Position: chr1:197908094-197919560
Accession: 1565868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070616	PAM2	PF07145.15	1.7e-05	1	1
ENSRNOP00000059876	PAM2	PF07145.15	1.7e-05	1	1
ENSRNOP00000059876	LsmAD	PF06741.13	2e-17	1	1
ENSRNOP00000070616	LsmAD	PF06741.13	2e-17	1	1
ENSRNOP00000059876	SM-ATX	PF14438.6	3.4e-19	1	1
ENSRNOP00000070616	SM-ATX	PF14438.6	3.4e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000080605	-	3430	XM_006230301	ENSRNOP00000070616	1078 (aa)	XP_006230363	A0A0G2JYE0
ENSRNOT00000068529	-	4275	XM_006230304	ENSRNOP00000059876	1072 (aa)	XP_006230366	B3DMA1

Gene Model

Click here to download ENSRNOG00000018686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000018686	Atxn2l	87	35.644	ENSRNOG00000001256	Atxn2	99	37.987

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018686	Atxn2l	98	93.750	ENSG00000168488	ATXN2L	100	98.901	Homo_sapiens
ENSRNOG00000018686	Atxn2l	98	90.265	ENSAMEG00000015502	ATXN2L	99	90.652	Ailuropoda_melanoleuca
ENSRNOG00000018686	Atxn2l	74	59.848	ENSACIG00000024435	atxn2l	99	40.638	Amphilophus_citrinellus
ENSRNOG00000018686	Atxn2l	58	37.117	ENSATEG00000019382	-	92	42.956	Anabas_testudineus
ENSRNOG00000018686	Atxn2l	90	74.444	ENSACAG00000005425	ATXN2L	98	74.190	Anolis_carolinensis
ENSRNOG00000018686	Atxn2l	98	92.579	ENSANAG00000026257	ATXN2L	98	92.764	Aotus_nancymaae
ENSRNOG00000018686	Atxn2l	74	67.829	ENSAMXG00000020362	-	94	43.323	Astyanax_mexicanus
ENSRNOG00000018686	Atxn2l	57	43.478	ENSAMXG00000003332	atxn2l	95	43.478	Astyanax_mexicanus
ENSRNOG00000018686	Atxn2l	98	93.283	ENSBTAG00000032087	ATXN2L	98	93.661	Bos_taurus
ENSRNOG00000018686	Atxn2l	98	92.030	ENSCJAG00000006251	ATXN2L	98	92.215	Callithrix_jacchus
ENSRNOG00000018686	Atxn2l	98	91.489	ENSCAFG00000017174	ATXN2L	97	92.892	Canis_familiaris
ENSRNOG00000018686	Atxn2l	98	93.133	ENSCAFG00020017576	ATXN2L	98	93.321	Canis_lupus_dingo
ENSRNOG00000018686	Atxn2l	94	93.069	ENSCHIG00000009907	ATXN2L	97	93.571	Capra_hircus
ENSRNOG00000018686	Atxn2l	92	93.598	ENSTSYG00000013854	ATXN2L	97	94.412	Carlito_syrichta
ENSRNOG00000018686	Atxn2l	98	88.404	ENSCPOG00000010521	ATXN2L	99	93.248	Cavia_porcellus
ENSRNOG00000018686	Atxn2l	98	93.032	ENSCCAG00000033928	ATXN2L	100	94.660	Cebus_capucinus
ENSRNOG00000018686	Atxn2l	98	93.371	ENSCATG00000021354	ATXN2L	99	94.389	Cercocebus_atys
ENSRNOG00000018686	Atxn2l	91	91.992	ENSCLAG00000016117	ATXN2L	100	92.392	Chinchilla_lanigera
ENSRNOG00000018686	Atxn2l	86	94.748	ENSCSAG00000006306	ATXN2L	95	94.641	Chlorocebus_sabaeus
ENSRNOG00000018686	Atxn2l	78	73.059	ENSCPBG00000003859	ATXN2L	84	73.601	Chrysemys_picta_bellii
ENSRNOG00000018686	Atxn2l	91	89.990	ENSCANG00000043625	ATXN2L	100	89.890	Colobus_angolensis_palliatus
ENSRNOG00000018686	Atxn2l	100	97.407	ENSCGRG00001017114	Atxn2l	100	97.407	Cricetulus_griseus_chok1gshd
ENSRNOG00000018686	Atxn2l	91	97.050	ENSCGRG00000001500	Atxn2l	100	97.219	Cricetulus_griseus_crigri
ENSRNOG00000018686	Atxn2l	84	43.120	ENSDARG00000011597	atxn2l	93	42.480	Danio_rerio
ENSRNOG00000018686	Atxn2l	94	92.871	ENSDNOG00000009821	ATXN2L	80	92.779	Dasypus_novemcinctus
ENSRNOG00000018686	Atxn2l	88	79.873	ENSETEG00000012782	ATXN2L	88	79.772	Echinops_telfairi
ENSRNOG00000018686	Atxn2l	98	91.566	ENSEASG00005014992	ATXN2L	99	93.103	Equus_asinus_asinus
ENSRNOG00000018686	Atxn2l	98	89.350	ENSECAG00000007301	ATXN2L	97	92.977	Equus_caballus
ENSRNOG00000018686	Atxn2l	86	90.466	ENSEEUG00000008940	ATXN2L	100	90.360	Erinaceus_europaeus
ENSRNOG00000018686	Atxn2l	87	41.522	ENSELUG00000023740	atxn2l	98	41.513	Esox_lucius
ENSRNOG00000018686	Atxn2l	71	65.480	ENSELUG00000022915	-	87	43.512	Esox_lucius
ENSRNOG00000018686	Atxn2l	98	92.030	ENSFCAG00000027807	ATXN2L	98	92.215	Felis_catus
ENSRNOG00000018686	Atxn2l	87	82.203	ENSFDAG00000020667	ATXN2L	94	82.316	Fukomys_damarensis
ENSRNOG00000018686	Atxn2l	55	59.585	ENSFHEG00000004491	-	88	37.131	Fundulus_heteroclitus
ENSRNOG00000018686	Atxn2l	85	76.642	ENSGAGG00000006078	ATXN2L	94	75.780	Gopherus_agassizii
ENSRNOG00000018686	Atxn2l	91	74.338	ENSGGOG00000036669	-	99	73.526	Gorilla_gorilla
ENSRNOG00000018686	Atxn2l	98	91.212	ENSGGOG00000014112	ATXN2L	99	92.842	Gorilla_gorilla
ENSRNOG00000018686	Atxn2l	87	40.430	ENSHBUG00000013425	atxn2l	95	41.194	Haplochromis_burtoni
ENSRNOG00000018686	Atxn2l	59	63.889	ENSHBUG00000007997	-	82	63.889	Haplochromis_burtoni
ENSRNOG00000018686	Atxn2l	98	90.605	ENSHGLG00000010957	ATXN2L	98	91.264	Heterocephalus_glaber_female
ENSRNOG00000018686	Atxn2l	91	88.175	ENSHGLG00100000705	ATXN2L	99	89.297	Heterocephalus_glaber_male
ENSRNOG00000018686	Atxn2l	87	44.261	ENSIPUG00000001761	atxn2l	94	43.744	Ictalurus_punctatus
ENSRNOG00000018686	Atxn2l	72	93.590	ENSSTOG00000011807	ATXN2L	99	93.419	Ictidomys_tridecemlineatus
ENSRNOG00000018686	Atxn2l	98	92.322	ENSJJAG00000005629	Atxn2l	99	94.554	Jaculus_jaculus
ENSRNOG00000018686	Atxn2l	84	65.091	ENSKMAG00000021450	-	98	42.498	Kryptolebias_marmoratus
ENSRNOG00000018686	Atxn2l	67	49.235	ENSLBEG00000006525	atxn2l	78	48.861	Labrus_bergylta
ENSRNOG00000018686	Atxn2l	90	63.131	ENSLACG00000006023	ATXN2L	98	61.430	Latimeria_chalumnae
ENSRNOG00000018686	Atxn2l	94	91.347	ENSLAFG00000018143	ATXN2L	99	92.814	Loxodonta_africana
ENSRNOG00000018686	Atxn2l	98	93.195	ENSMFAG00000030590	ATXN2L	98	93.384	Macaca_fascicularis
ENSRNOG00000018686	Atxn2l	98	93.195	ENSMMUG00000003298	ATXN2L	98	93.384	Macaca_mulatta
ENSRNOG00000018686	Atxn2l	98	91.852	ENSMNEG00000032716	ATXN2L	98	92.037	Macaca_nemestrina
ENSRNOG00000018686	Atxn2l	91	93.393	ENSMLEG00000034087	ATXN2L	100	93.293	Mandrillus_leucophaeus
ENSRNOG00000018686	Atxn2l	85	63.701	ENSMAMG00000013005	-	99	41.802	Mastacembelus_armatus
ENSRNOG00000018686	Atxn2l	81	38.727	ENSMZEG00005001258	atxn2l	94	40.625	Maylandia_zebra
ENSRNOG00000018686	Atxn2l	100	95.620	ENSMAUG00000011753	Atxn2l	100	95.620	Mesocricetus_auratus
ENSRNOG00000018686	Atxn2l	94	93.261	ENSMICG00000010608	ATXN2L	97	93.564	Microcebus_murinus
ENSRNOG00000018686	Atxn2l	96	96.709	ENSMOCG00000020882	Atxn2l	100	97.451	Microtus_ochrogaster
ENSRNOG00000018686	Atxn2l	86	41.048	ENSMMOG00000001440	-	99	40.927	Mola_mola
ENSRNOG00000018686	Atxn2l	93	85.171	ENSMODG00000015570	ATXN2L	97	84.031	Monodelphis_domestica
ENSRNOG00000018686	Atxn2l	60	63.953	ENSMALG00000008430	-	73	61.017	Monopterus_albus
ENSRNOG00000018686	Atxn2l	100	96.807	MGP_CAROLIEiJ_G0030450	Atxn2l	100	97.798	Mus_caroli
ENSRNOG00000018686	Atxn2l	100	96.442	ENSMUSG00000032637	Atxn2l	100	97.683	Mus_musculus
ENSRNOG00000018686	Atxn2l	100	96.624	MGP_PahariEiJ_G0013660	Atxn2l	100	97.798	Mus_pahari
ENSRNOG00000018686	Atxn2l	100	96.533	MGP_SPRETEiJ_G0031564	Atxn2l	100	97.683	Mus_spretus
ENSRNOG00000018686	Atxn2l	84	92.308	ENSMPUG00000012807	ATXN2L	98	92.198	Mustela_putorius_furo
ENSRNOG00000018686	Atxn2l	98	92.715	ENSMLUG00000009877	ATXN2L	98	92.810	Myotis_lucifugus
ENSRNOG00000018686	Atxn2l	98	94.140	ENSNGAG00000021446	Atxn2l	100	96.060	Nannospalax_galili
ENSRNOG00000018686	Atxn2l	66	38.228	ENSNBRG00000020833	-	94	40.488	Neolamprologus_brichardi
ENSRNOG00000018686	Atxn2l	95	92.344	ENSNLEG00000011004	ATXN2L	99	92.951	Nomascus_leucogenys
ENSRNOG00000018686	Atxn2l	96	66.409	ENSNLEG00000033414	-	97	67.926	Nomascus_leucogenys
ENSRNOG00000018686	Atxn2l	96	83.687	ENSMEUG00000011098	ATXN2L	95	82.755	Notamacropus_eugenii
ENSRNOG00000018686	Atxn2l	91	89.089	ENSOPRG00000002270	-	100	89.089	Ochotona_princeps
ENSRNOG00000018686	Atxn2l	83	42.492	ENSONIG00000009388	atxn2l	96	42.402	Oreochromis_niloticus
ENSRNOG00000018686	Atxn2l	87	76.801	ENSOANG00000013115	ATXN2L	90	76.907	Ornithorhynchus_anatinus
ENSRNOG00000018686	Atxn2l	89	90.511	ENSOCUG00000002677	ATXN2L	99	94.059	Oryctolagus_cuniculus
ENSRNOG00000018686	Atxn2l	82	65.299	ENSOMEG00000021118	-	94	42.527	Oryzias_melastigma
ENSRNOG00000018686	Atxn2l	98	91.682	ENSOGAG00000012596	ATXN2L	98	91.959	Otolemur_garnettii
ENSRNOG00000018686	Atxn2l	85	93.152	ENSOARG00000002503	ATXN2L	99	93.152	Ovis_aries
ENSRNOG00000018686	Atxn2l	91	73.727	ENSPPAG00000036236	-	98	73.131	Pan_paniscus
ENSRNOG00000018686	Atxn2l	94	90.972	ENSPPAG00000039107	ATXN2L	99	94.921	Pan_paniscus
ENSRNOG00000018686	Atxn2l	98	91.937	ENSPPRG00000013690	ATXN2L	98	92.122	Panthera_pardus
ENSRNOG00000018686	Atxn2l	91	92.277	ENSPTIG00000015041	ATXN2L	94	92.178	Panthera_tigris_altaica
ENSRNOG00000018686	Atxn2l	98	93.655	ENSPTRG00000007938	ATXN2L	98	93.845	Pan_troglodytes
ENSRNOG00000018686	Atxn2l	98	89.935	ENSPANG00000018770	ATXN2L	98	89.935	Papio_anubis
ENSRNOG00000018686	Atxn2l	80	66.790	ENSPKIG00000018462	-	98	42.871	Paramormyrops_kingsleyae
ENSRNOG00000018686	Atxn2l	84	75.190	ENSPSIG00000004866	ATXN2L	98	74.730	Pelodiscus_sinensis
ENSRNOG00000018686	Atxn2l	60	61.940	ENSPMGG00000014821	-	93	55.432	Periophthalmus_magnuspinnatus
ENSRNOG00000018686	Atxn2l	96	96.004	ENSPEMG00000019231	Atxn2l	99	97.163	Peromyscus_maniculatus_bairdii
ENSRNOG00000018686	Atxn2l	94	85.953	ENSPCIG00000025207	ATXN2L	97	85.602	Phascolarctos_cinereus
ENSRNOG00000018686	Atxn2l	56	34.581	ENSPREG00000023090	-	83	64.419	Poecilia_reticulata
ENSRNOG00000018686	Atxn2l	85	76.035	ENSPPYG00000017765	-	95	75.708	Pongo_abelii
ENSRNOG00000018686	Atxn2l	94	93.552	ENSPPYG00000025917	ATXN2L	97	93.855	Pongo_abelii
ENSRNOG00000018686	Atxn2l	63	100.000	ENSPCAG00000015179	ATXN2L	64	100.000	Procavia_capensis
ENSRNOG00000018686	Atxn2l	98	92.944	ENSPCOG00000024791	ATXN2L	98	93.039	Propithecus_coquereli
ENSRNOG00000018686	Atxn2l	98	83.859	ENSPVAG00000003958	ATXN2L	98	83.952	Pteropus_vampyrus
ENSRNOG00000018686	Atxn2l	59	61.278	ENSPNYG00000012482	atxn2l	94	47.702	Pundamilia_nyererei
ENSRNOG00000018686	Atxn2l	87	43.503	ENSPNAG00000014538	atxn2l	98	44.204	Pygocentrus_nattereri
ENSRNOG00000018686	Atxn2l	83	41.818	ENSPNAG00000023685	-	95	41.642	Pygocentrus_nattereri
ENSRNOG00000018686	Atxn2l	98	82.270	ENSRBIG00000036712	ATXN2L	99	82.696	Rhinopithecus_bieti
ENSRNOG00000018686	Atxn2l	98	93.750	ENSRROG00000028547	ATXN2L	98	94.688	Rhinopithecus_roxellana
ENSRNOG00000018686	Atxn2l	90	93.840	ENSSBOG00000025782	ATXN2L	100	93.737	Saimiri_boliviensis_boliviensis
ENSRNOG00000018686	Atxn2l	94	84.479	ENSSHAG00000012015	ATXN2L	98	87.514	Sarcophilus_harrisii
ENSRNOG00000018686	Atxn2l	88	42.914	ENSSFOG00015001018	atxn2l	98	41.879	Scleropages_formosus
ENSRNOG00000018686	Atxn2l	73	40.780	ENSSMAG00000016365	atxn2l	95	42.232	Scophthalmus_maximus
ENSRNOG00000018686	Atxn2l	65	46.237	ENSSLDG00000017701	-	86	45.988	Seriola_lalandi_dorsalis
ENSRNOG00000018686	Atxn2l	88	91.632	ENSSARG00000009732	ATXN2L	100	91.529	Sorex_araneus
ENSRNOG00000018686	Atxn2l	86	76.883	ENSSPUG00000016297	ATXN2L	92	76.722	Sphenodon_punctatus
ENSRNOG00000018686	Atxn2l	98	90.625	ENSSSCG00000021845	ATXN2L	100	94.555	Sus_scrofa
ENSRNOG00000018686	Atxn2l	54	64.444	ENSTRUG00000007132	-	94	46.350	Takifugu_rubripes
ENSRNOG00000018686	Atxn2l	64	93.617	ENSTBEG00000014435	-	64	92.553	Tupaia_belangeri
ENSRNOG00000018686	Atxn2l	98	88.579	ENSTTRG00000005913	ATXN2L	98	88.765	Tursiops_truncatus
ENSRNOG00000018686	Atxn2l	94	92.871	ENSUAMG00000001462	ATXN2L	97	93.076	Ursus_americanus
ENSRNOG00000018686	Atxn2l	90	90.788	ENSUMAG00000009437	ATXN2L	100	90.890	Ursus_maritimus
ENSRNOG00000018686	Atxn2l	57	95.338	ENSVPAG00000009539	-	63	95.338	Vicugna_pacos
ENSRNOG00000018686	Atxn2l	98	89.415	ENSVVUG00000024239	ATXN2L	100	94.362	Vulpes_vulpes
ENSRNOG00000018686	Atxn2l	89	59.959	ENSXETG00000014990	atxn2l	96	59.448	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0010494	cytoplasmic stress granule	21873635.	IBA	Component
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0010603	regulation of cytoplasmic mRNA processing body assembly	21873635.	IBA	Process
GO:0010603	regulation of cytoplasmic mRNA processing body assembly	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016020	membrane	-	ISO	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0034063	stress granule assembly	21873635.	IBA	Process
GO:0034063	stress granule assembly	-	ISO	Process