EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018718 (Gene tree)
Gene ID: 685332
Gene Symbol: Rpp30
Alias: LOC685332|MGC187977
Full Name: ribonuclease P/MRP subunit p30
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 22841 bases
Position: chr1:254697247-254720087
Accession: 1595116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025413	RNase_P_p30	PF01876.16	4.7e-63	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025412	-	1438	-	ENSRNOP00000025413	268 (aa)	-	D3ZU51

Gene Model

Click here to download ENSRNOG00000018718's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018718	Rpp30	100	90.672	ENSG00000148688	RPP30	100	90.672	Homo_sapiens
ENSRNOG00000018718	Rpp30	88	58.051	ENSAPOG00000023156	rpp30	93	53.506	Acanthochromis_polyacanthus
ENSRNOG00000018718	Rpp30	100	91.418	ENSAMEG00000016776	RPP30	100	91.418	Ailuropoda_melanoleuca
ENSRNOG00000018718	Rpp30	99	48.689	ENSACIG00000022810	rpp30	99	48.689	Amphilophus_citrinellus
ENSRNOG00000018718	Rpp30	99	54.647	ENSAOCG00000016438	rpp30	90	54.647	Amphiprion_ocellaris
ENSRNOG00000018718	Rpp30	99	54.647	ENSAPEG00000008697	rpp30	90	54.647	Amphiprion_percula
ENSRNOG00000018718	Rpp30	96	56.977	ENSATEG00000015263	rpp30	93	56.977	Anabas_testudineus
ENSRNOG00000018718	Rpp30	90	73.444	ENSAPLG00000009959	RPP30	100	73.444	Anas_platyrhynchos
ENSRNOG00000018718	Rpp30	99	69.811	ENSACAG00000007996	RPP30	99	69.811	Anolis_carolinensis
ENSRNOG00000018718	Rpp30	99	79.245	ENSANAG00000009439	RPP30	83	79.245	Aotus_nancymaae
ENSRNOG00000018718	Rpp30	99	53.358	ENSACLG00000015389	-	99	53.358	Astatotilapia_calliptera
ENSRNOG00000018718	Rpp30	99	57.519	ENSAMXG00000040653	rpp30	97	57.519	Astyanax_mexicanus
ENSRNOG00000018718	Rpp30	100	90.672	ENSBTAG00000002973	RPP30	100	90.672	Bos_taurus
ENSRNOG00000018718	Rpp30	100	88.806	ENSCJAG00000011045	RPP30	100	88.806	Callithrix_jacchus
ENSRNOG00000018718	Rpp30	100	90.299	ENSCAFG00000031801	RPP30	100	90.299	Canis_familiaris
ENSRNOG00000018718	Rpp30	100	90.299	ENSCAFG00020000258	RPP30	100	90.299	Canis_lupus_dingo
ENSRNOG00000018718	Rpp30	100	87.687	ENSCHIG00000012901	RPP30	100	87.687	Capra_hircus
ENSRNOG00000018718	Rpp30	100	90.672	ENSTSYG00000013903	RPP30	100	90.672	Carlito_syrichta
ENSRNOG00000018718	Rpp30	90	70.417	ENSCAPG00000001326	RPP30	100	70.417	Cavia_aperea
ENSRNOG00000018718	Rpp30	100	90.299	ENSCPOG00000033174	RPP30	100	90.299	Cavia_porcellus
ENSRNOG00000018718	Rpp30	100	89.552	ENSCCAG00000029514	RPP30	100	89.552	Cebus_capucinus
ENSRNOG00000018718	Rpp30	99	90.189	ENSCATG00000042072	RPP30	99	89.513	Cercocebus_atys
ENSRNOG00000018718	Rpp30	100	91.418	ENSCLAG00000008595	RPP30	100	91.418	Chinchilla_lanigera
ENSRNOG00000018718	Rpp30	100	89.925	ENSCSAG00000006694	RPP30	100	89.925	Chlorocebus_sabaeus
ENSRNOG00000018718	Rpp30	87	51.953	ENSCHOG00000007023	-	100	51.953	Choloepus_hoffmanni
ENSRNOG00000018718	Rpp30	99	74.060	ENSCPBG00000026518	RPP30	99	74.060	Chrysemys_picta_bellii
ENSRNOG00000018718	Rpp30	87	42.562	ENSCING00000019714	-	89	41.736	Ciona_intestinalis
ENSRNOG00000018718	Rpp30	94	38.951	ENSCSAVG00000011282	-	87	38.951	Ciona_savignyi
ENSRNOG00000018718	Rpp30	100	89.925	ENSCANG00000041084	RPP30	100	89.925	Colobus_angolensis_palliatus
ENSRNOG00000018718	Rpp30	100	80.597	ENSCGRG00001000834	-	100	80.597	Cricetulus_griseus_chok1gshd
ENSRNOG00000018718	Rpp30	87	97.845	ENSCGRG00001017068	-	97	97.845	Cricetulus_griseus_chok1gshd
ENSRNOG00000018718	Rpp30	100	80.970	ENSCGRG00000006196	-	100	80.970	Cricetulus_griseus_crigri
ENSRNOG00000018718	Rpp30	100	95.896	ENSCGRG00000002508	-	100	95.896	Cricetulus_griseus_crigri
ENSRNOG00000018718	Rpp30	92	54.065	ENSCSEG00000001779	rpp30	84	54.065	Cynoglossus_semilaevis
ENSRNOG00000018718	Rpp30	99	56.089	ENSCVAG00000003139	rpp30	99	56.458	Cyprinodon_variegatus
ENSRNOG00000018718	Rpp30	99	59.176	ENSDARG00000027428	rpp30	99	59.176	Danio_rerio
ENSRNOG00000018718	Rpp30	100	90.672	ENSDNOG00000010186	RPP30	92	90.672	Dasypus_novemcinctus
ENSRNOG00000018718	Rpp30	100	91.791	ENSDORG00000015333	Rpp30	100	91.791	Dipodomys_ordii
ENSRNOG00000018718	Rpp30	87	34.728	FBgn0283652	Rpp30	78	34.728	Drosophila_melanogaster
ENSRNOG00000018718	Rpp30	100	88.433	ENSETEG00000018823	RPP30	100	88.433	Echinops_telfairi
ENSRNOG00000018718	Rpp30	56	39.869	ENSEBUG00000003989	-	83	39.869	Eptatretus_burgeri
ENSRNOG00000018718	Rpp30	99	91.011	ENSEASG00005011050	RPP30	99	91.011	Equus_asinus_asinus
ENSRNOG00000018718	Rpp30	99	91.011	ENSECAG00000021917	RPP30	99	91.011	Equus_caballus
ENSRNOG00000018718	Rpp30	97	64.368	ENSEEUG00000009986	-	99	64.368	Erinaceus_europaeus
ENSRNOG00000018718	Rpp30	99	66.171	ENSELUG00000003731	rpp30	95	66.171	Esox_lucius
ENSRNOG00000018718	Rpp30	100	91.418	ENSFCAG00000029073	RPP30	93	91.418	Felis_catus
ENSRNOG00000018718	Rpp30	99	73.408	ENSFALG00000007711	RPP30	99	73.408	Ficedula_albicollis
ENSRNOG00000018718	Rpp30	99	91.698	ENSFDAG00000019241	RPP30	99	91.698	Fukomys_damarensis
ENSRNOG00000018718	Rpp30	92	56.098	ENSFHEG00000014739	rpp30	97	53.909	Fundulus_heteroclitus
ENSRNOG00000018718	Rpp30	91	55.159	ENSGMOG00000005379	rpp30	100	55.159	Gadus_morhua
ENSRNOG00000018718	Rpp30	100	72.388	ENSGALG00000006486	RPP30	99	73.387	Gallus_gallus
ENSRNOG00000018718	Rpp30	97	54.580	ENSGAFG00000001445	rpp30	94	54.580	Gambusia_affinis
ENSRNOG00000018718	Rpp30	99	53.597	ENSGACG00000010285	rpp30	99	53.597	Gasterosteus_aculeatus
ENSRNOG00000018718	Rpp30	99	71.805	ENSGAGG00000000980	RPP30	69	71.805	Gopherus_agassizii
ENSRNOG00000018718	Rpp30	100	90.672	ENSGGOG00000026917	RPP30	100	90.672	Gorilla_gorilla
ENSRNOG00000018718	Rpp30	99	53.731	ENSHBUG00000019332	rpp30	99	53.731	Haplochromis_burtoni
ENSRNOG00000018718	Rpp30	100	91.418	ENSHGLG00000013072	RPP30	100	91.418	Heterocephalus_glaber_female
ENSRNOG00000018718	Rpp30	100	91.418	ENSHGLG00100017798	RPP30	100	91.418	Heterocephalus_glaber_male
ENSRNOG00000018718	Rpp30	94	52.326	ENSHCOG00000004763	-	90	52.326	Hippocampus_comes
ENSRNOG00000018718	Rpp30	99	58.303	ENSIPUG00000003863	rpp30	99	58.303	Ictalurus_punctatus
ENSRNOG00000018718	Rpp30	100	90.672	ENSSTOG00000027002	RPP30	100	90.672	Ictidomys_tridecemlineatus
ENSRNOG00000018718	Rpp30	100	92.164	ENSJJAG00000020041	Rpp30	100	92.164	Jaculus_jaculus
ENSRNOG00000018718	Rpp30	99	54.478	ENSKMAG00000015355	rpp30	99	54.478	Kryptolebias_marmoratus
ENSRNOG00000018718	Rpp30	99	54.044	ENSLBEG00000019989	rpp30	99	54.044	Labrus_bergylta
ENSRNOG00000018718	Rpp30	72	60.274	ENSLACG00000002534	RPP30	96	60.274	Latimeria_chalumnae
ENSRNOG00000018718	Rpp30	99	63.910	ENSLOCG00000000031	rpp30	98	63.910	Lepisosteus_oculatus
ENSRNOG00000018718	Rpp30	100	91.418	ENSLAFG00000015931	RPP30	100	91.418	Loxodonta_africana
ENSRNOG00000018718	Rpp30	100	89.925	ENSMFAG00000031109	RPP30	100	89.925	Macaca_fascicularis
ENSRNOG00000018718	Rpp30	100	89.925	ENSMMUG00000006628	RPP30	100	89.925	Macaca_mulatta
ENSRNOG00000018718	Rpp30	100	89.552	ENSMNEG00000033838	RPP30	100	89.552	Macaca_nemestrina
ENSRNOG00000018718	Rpp30	100	89.925	ENSMLEG00000037578	RPP30	100	89.925	Mandrillus_leucophaeus
ENSRNOG00000018718	Rpp30	99	55.351	ENSMAMG00000010934	rpp30	99	55.351	Mastacembelus_armatus
ENSRNOG00000018718	Rpp30	99	54.444	ENSMZEG00005018508	-	99	54.444	Maylandia_zebra
ENSRNOG00000018718	Rpp30	100	68.284	ENSMGAG00000008452	RPP30	100	68.657	Meleagris_gallopavo
ENSRNOG00000018718	Rpp30	100	95.522	ENSMAUG00000008797	Rpp30	100	95.522	Mesocricetus_auratus
ENSRNOG00000018718	Rpp30	100	91.791	ENSMICG00000012019	RPP30	100	91.791	Microcebus_murinus
ENSRNOG00000018718	Rpp30	100	94.030	ENSMOCG00000016872	Rpp30	100	94.030	Microtus_ochrogaster
ENSRNOG00000018718	Rpp30	97	51.341	ENSMMOG00000009266	rpp30	96	51.341	Mola_mola
ENSRNOG00000018718	Rpp30	99	82.397	ENSMODG00000006863	-	99	82.397	Monodelphis_domestica
ENSRNOG00000018718	Rpp30	99	69.288	ENSMODG00000009342	-	99	69.288	Monodelphis_domestica
ENSRNOG00000018718	Rpp30	98	54.753	ENSMALG00000011718	rpp30	96	54.753	Monopterus_albus
ENSRNOG00000018718	Rpp30	99	96.629	MGP_CAROLIEiJ_G0022902	Rpp30	99	96.629	Mus_caroli
ENSRNOG00000018718	Rpp30	100	96.642	ENSMUSG00000024800	Rpp30	100	96.642	Mus_musculus
ENSRNOG00000018718	Rpp30	100	97.388	MGP_PahariEiJ_G0014397	Rpp30	100	97.388	Mus_pahari
ENSRNOG00000018718	Rpp30	100	96.269	MGP_SPRETEiJ_G0023821	Rpp30	100	96.269	Mus_spretus
ENSRNOG00000018718	Rpp30	99	91.698	ENSMPUG00000017258	RPP30	93	91.698	Mustela_putorius_furo
ENSRNOG00000018718	Rpp30	99	91.386	ENSMLUG00000017169	RPP30	99	91.386	Myotis_lucifugus
ENSRNOG00000018718	Rpp30	100	92.164	ENSNGAG00000012018	-	100	92.164	Nannospalax_galili
ENSRNOG00000018718	Rpp30	100	74.254	ENSNGAG00000014392	-	100	74.254	Nannospalax_galili
ENSRNOG00000018718	Rpp30	94	48.047	ENSNBRG00000024170	-	95	48.047	Neolamprologus_brichardi
ENSRNOG00000018718	Rpp30	100	91.045	ENSNLEG00000012383	RPP30	100	91.045	Nomascus_leucogenys
ENSRNOG00000018718	Rpp30	99	72.694	ENSMEUG00000015587	-	100	72.694	Notamacropus_eugenii
ENSRNOG00000018718	Rpp30	53	92.958	ENSOPRG00000007367	-	100	92.958	Ochotona_princeps
ENSRNOG00000018718	Rpp30	100	67.164	ENSODEG00000004560	-	100	67.164	Octodon_degus
ENSRNOG00000018718	Rpp30	98	92.015	ENSODEG00000004530	-	100	92.015	Octodon_degus
ENSRNOG00000018718	Rpp30	77	55.556	ENSONIG00000019140	rpp30	100	55.556	Oreochromis_niloticus
ENSRNOG00000018718	Rpp30	99	80.524	ENSOANG00000003415	RPP30	99	80.524	Ornithorhynchus_anatinus
ENSRNOG00000018718	Rpp30	100	88.806	ENSOCUG00000006896	RPP30	92	88.806	Oryctolagus_cuniculus
ENSRNOG00000018718	Rpp30	95	55.906	ENSORLG00000020420	rpp30	87	55.906	Oryzias_latipes
ENSRNOG00000018718	Rpp30	99	55.224	ENSORLG00020009037	-	99	55.224	Oryzias_latipes_hni
ENSRNOG00000018718	Rpp30	99	55.224	ENSORLG00015008300	rpp30	93	55.224	Oryzias_latipes_hsok
ENSRNOG00000018718	Rpp30	68	52.174	ENSOMEG00000012640	-	98	52.174	Oryzias_melastigma
ENSRNOG00000018718	Rpp30	100	90.672	ENSOGAG00000013963	RPP30	100	90.672	Otolemur_garnettii
ENSRNOG00000018718	Rpp30	98	83.588	ENSOARG00000015789	RPP30	98	83.588	Ovis_aries
ENSRNOG00000018718	Rpp30	100	90.672	ENSPPAG00000043779	RPP30	100	90.672	Pan_paniscus
ENSRNOG00000018718	Rpp30	100	91.791	ENSPPRG00000000115	RPP30	100	91.791	Panthera_pardus
ENSRNOG00000018718	Rpp30	100	91.791	ENSPTIG00000014949	RPP30	100	91.791	Panthera_tigris_altaica
ENSRNOG00000018718	Rpp30	99	90.943	ENSPTRG00000002742	RPP30	100	87.313	Pan_troglodytes
ENSRNOG00000018718	Rpp30	100	89.925	ENSPANG00000021710	RPP30	100	89.925	Papio_anubis
ENSRNOG00000018718	Rpp30	53	47.222	ENSPKIG00000024858	rpp30	76	47.222	Paramormyrops_kingsleyae
ENSRNOG00000018718	Rpp30	90	74.074	ENSPSIG00000013213	RPP30	99	74.074	Pelodiscus_sinensis
ENSRNOG00000018718	Rpp30	87	44.397	ENSPMGG00000014872	rpp30	93	44.397	Periophthalmus_magnuspinnatus
ENSRNOG00000018718	Rpp30	100	77.612	ENSPEMG00000001948	Rpp30	100	77.612	Peromyscus_maniculatus_bairdii
ENSRNOG00000018718	Rpp30	53	43.293	ENSPMAG00000001855	-	99	43.293	Petromyzon_marinus
ENSRNOG00000018718	Rpp30	99	82.772	ENSPCIG00000015730	RPP30	99	82.772	Phascolarctos_cinereus
ENSRNOG00000018718	Rpp30	91	57.143	ENSPFOG00000000610	rpp30	91	57.143	Poecilia_formosa
ENSRNOG00000018718	Rpp30	91	56.967	ENSPLAG00000003728	rpp30	85	56.967	Poecilia_latipinna
ENSRNOG00000018718	Rpp30	91	55.918	ENSPMEG00000015692	rpp30	91	55.918	Poecilia_mexicana
ENSRNOG00000018718	Rpp30	91	56.735	ENSPREG00000001536	rpp30	91	56.735	Poecilia_reticulata
ENSRNOG00000018718	Rpp30	100	91.418	ENSPPYG00000002473	RPP30	100	91.418	Pongo_abelii
ENSRNOG00000018718	Rpp30	99	60.839	ENSPCAG00000016930	RPP30	100	60.839	Procavia_capensis
ENSRNOG00000018718	Rpp30	100	91.791	ENSPCOG00000017865	RPP30	100	91.791	Propithecus_coquereli
ENSRNOG00000018718	Rpp30	99	83.737	ENSPVAG00000010524	RPP30	94	83.737	Pteropus_vampyrus
ENSRNOG00000018718	Rpp30	93	47.012	ENSPNYG00000016930	-	85	47.012	Pundamilia_nyererei
ENSRNOG00000018718	Rpp30	99	60.821	ENSPNAG00000014804	rpp30	99	60.821	Pygocentrus_nattereri
ENSRNOG00000018718	Rpp30	99	86.792	ENSRBIG00000036948	RPP30	85	86.792	Rhinopithecus_bieti
ENSRNOG00000018718	Rpp30	99	70.896	ENSSBOG00000025405	RPP30	89	70.896	Saimiri_boliviensis_boliviensis
ENSRNOG00000018718	Rpp30	100	81.111	ENSSHAG00000007452	RPP30	100	81.111	Sarcophilus_harrisii
ENSRNOG00000018718	Rpp30	99	63.910	ENSSFOG00015012510	rpp30	98	63.910	Scleropages_formosus
ENSRNOG00000018718	Rpp30	99	54.815	ENSSMAG00000013854	rpp30	98	54.815	Scophthalmus_maximus
ENSRNOG00000018718	Rpp30	97	56.154	ENSSDUG00000015086	rpp30	93	56.154	Seriola_dumerili
ENSRNOG00000018718	Rpp30	88	51.667	ENSSLDG00000021234	rpp30	94	51.667	Seriola_lalandi_dorsalis
ENSRNOG00000018718	Rpp30	100	88.806	ENSSARG00000007110	RPP30	100	88.806	Sorex_araneus
ENSRNOG00000018718	Rpp30	85	65.217	ENSSPUG00000000595	RPP30	99	65.217	Sphenodon_punctatus
ENSRNOG00000018718	Rpp30	99	89.513	ENSSSCG00000010460	RPP30	99	89.513	Sus_scrofa
ENSRNOG00000018718	Rpp30	90	74.274	ENSTGUG00000008399	RPP30	96	74.274	Taeniopygia_guttata
ENSRNOG00000018718	Rpp30	53	41.958	ENSTRUG00000020711	-	57	41.958	Takifugu_rubripes
ENSRNOG00000018718	Rpp30	100	53.650	ENSTNIG00000018540	rpp30	96	53.650	Tetraodon_nigroviridis
ENSRNOG00000018718	Rpp30	83	90.541	ENSTBEG00000010734	RPP30	100	90.541	Tupaia_belangeri
ENSRNOG00000018718	Rpp30	89	80.252	ENSTTRG00000014708	RPP30	89	80.252	Tursiops_truncatus
ENSRNOG00000018718	Rpp30	68	92.896	ENSUAMG00000001045	RPP30	90	92.896	Ursus_americanus
ENSRNOG00000018718	Rpp30	100	91.791	ENSUMAG00000000971	RPP30	100	91.791	Ursus_maritimus
ENSRNOG00000018718	Rpp30	99	75.261	ENSVPAG00000002077	RPP30	100	75.261	Vicugna_pacos
ENSRNOG00000018718	Rpp30	100	82.090	ENSVVUG00000021784	RPP30	100	82.090	Vulpes_vulpes
ENSRNOG00000018718	Rpp30	89	72.269	ENSXETG00000021785	rpp30	88	72.269	Xenopus_tropicalis
ENSRNOG00000018718	Rpp30	99	50.752	ENSXCOG00000017864	rpp30	95	50.752	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	-	IEA	Component
GO:0000172	ribonuclease MRP complex	-	ISO	Component
GO:0001682	tRNA 5'-leader removal	-	IEA	Process
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process