EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000018761 (Gene tree)
Gene ID: 293484
Gene Symbol: Eif3c
Alias: Eif3s8|LOC293484
Full Name: eukaryotic translation initiation factor 3%2C subunit C
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 18195 bases
Position: chr1:197964407-197982601
Accession: 1308871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025782	eIF-3c_N	PF05470.12	1.6e-267	1	2
ENSRNOP00000025782	eIF-3c_N	PF05470.12	1.6e-267	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025782	-	3036	XM_006230226	ENSRNOP00000025782	911 (aa)	XP_006230288	B5DFC8

Gene Model

Click here to download ENSRNOG00000018761's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000018761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000018761	Eif3c	100	96.166	ENSG00000184110	EIF3C	100	98.734	Homo_sapiens
ENSRNOG00000018761	Eif3c	100	96.061	ENSG00000205609	EIF3CL	100	96.061	Homo_sapiens
ENSRNOG00000018761	Eif3c	99	75.599	ENSAPOG00000024092	eif3c	92	83.361	Acanthochromis_polyacanthus
ENSRNOG00000018761	Eif3c	100	97.152	ENSAMEG00000015454	-	100	97.152	Ailuropoda_melanoleuca
ENSRNOG00000018761	Eif3c	99	72.767	ENSACIG00000015082	eif3c	93	83.056	Amphilophus_citrinellus
ENSRNOG00000018761	Eif3c	94	83.168	ENSAOCG00000021466	eif3c	98	75.272	Amphiprion_ocellaris
ENSRNOG00000018761	Eif3c	94	83.168	ENSAPEG00000010521	eif3c	98	75.272	Amphiprion_percula
ENSRNOG00000018761	Eif3c	99	75.299	ENSATEG00000019001	eif3c	98	75.299	Anabas_testudineus
ENSRNOG00000018761	Eif3c	100	85.371	ENSACAG00000005937	-	100	85.153	Anolis_carolinensis
ENSRNOG00000018761	Eif3c	100	96.276	ENSANAG00000020640	-	100	96.276	Aotus_nancymaae
ENSRNOG00000018761	Eif3c	84	79.967	ENSACLG00000009322	eif3c	92	79.967	Astatotilapia_calliptera
ENSRNOG00000018761	Eif3c	84	82.810	ENSACLG00000009347	eif3c	90	82.810	Astatotilapia_calliptera
ENSRNOG00000018761	Eif3c	99	75.495	ENSAMXG00000020949	eif3c	98	75.082	Astyanax_mexicanus
ENSRNOG00000018761	Eif3c	100	96.714	ENSBTAG00000006543	EIF3CL	100	96.714	Bos_taurus
ENSRNOG00000018761	Eif3c	99	42.134	WBGene00001226	eif-3.C	66	46.591	Caenorhabditis_elegans
ENSRNOG00000018761	Eif3c	100	96.166	ENSCJAG00000006341	-	100	96.166	Callithrix_jacchus
ENSRNOG00000018761	Eif3c	100	96.933	ENSCAFG00000017143	-	100	96.933	Canis_familiaris
ENSRNOG00000018761	Eif3c	100	97.043	ENSCAFG00020017587	-	100	97.043	Canis_lupus_dingo
ENSRNOG00000018761	Eif3c	100	96.933	ENSCHIG00000024795	-	100	96.933	Capra_hircus
ENSRNOG00000018761	Eif3c	100	95.947	ENSTSYG00000003486	-	100	95.947	Carlito_syrichta
ENSRNOG00000018761	Eif3c	96	86.410	ENSCAPG00000015887	-	100	87.656	Cavia_aperea
ENSRNOG00000018761	Eif3c	100	97.152	ENSCPOG00000007533	-	100	97.152	Cavia_porcellus
ENSRNOG00000018761	Eif3c	99	81.698	ENSCCAG00000029099	-	99	80.286	Cebus_capucinus
ENSRNOG00000018761	Eif3c	100	90.909	ENSCCAG00000027724	-	100	90.142	Cebus_capucinus
ENSRNOG00000018761	Eif3c	100	94.737	ENSCCAG00000034928	-	100	94.737	Cebus_capucinus
ENSRNOG00000018761	Eif3c	100	96.057	ENSCATG00000032673	-	100	96.057	Cercocebus_atys
ENSRNOG00000018761	Eif3c	100	96.166	ENSCLAG00000011094	-	100	96.276	Chinchilla_lanigera
ENSRNOG00000018761	Eif3c	100	96.057	ENSCSAG00000006297	-	100	96.057	Chlorocebus_sabaeus
ENSRNOG00000018761	Eif3c	55	80.309	ENSCHOG00000003120	-	88	80.309	Choloepus_hoffmanni
ENSRNOG00000018761	Eif3c	71	92.038	ENSCPBG00000012407	-	94	78.311	Chrysemys_picta_bellii
ENSRNOG00000018761	Eif3c	79	55.822	ENSCSAVG00000006744	-	90	56.522	Ciona_savignyi
ENSRNOG00000018761	Eif3c	100	96.057	ENSCANG00000033626	-	100	96.057	Colobus_angolensis_palliatus
ENSRNOG00000018761	Eif3c	100	98.355	ENSCGRG00001015265	EIF3C	100	98.355	Cricetulus_griseus_chok1gshd
ENSRNOG00000018761	Eif3c	100	73.770	ENSCSEG00000017770	eif3c	100	73.552	Cynoglossus_semilaevis
ENSRNOG00000018761	Eif3c	99	74.591	ENSCVAG00000005402	eif3c	98	75.027	Cyprinodon_variegatus
ENSRNOG00000018761	Eif3c	99	74.563	ENSDARG00000016443	eif3c	98	74.728	Danio_rerio
ENSRNOG00000018761	Eif3c	100	96.495	ENSDNOG00000031497	-	100	96.495	Dasypus_novemcinctus
ENSRNOG00000018761	Eif3c	100	97.043	ENSDORG00000016471	Eif3c	100	97.043	Dipodomys_ordii
ENSRNOG00000018761	Eif3c	66	56.860	FBgn0034258	eIF3c	63	56.949	Drosophila_melanogaster
ENSRNOG00000018761	Eif3c	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSRNOG00000018761	Eif3c	99	62.513	ENSEBUG00000001629	eif3c	99	63.430	Eptatretus_burgeri
ENSRNOG00000018761	Eif3c	100	96.714	ENSECAG00000008746	-	100	96.714	Equus_caballus
ENSRNOG00000018761	Eif3c	65	63.605	ENSEEUG00000000726	-	64	63.605	Erinaceus_europaeus
ENSRNOG00000018761	Eif3c	87	95.614	ENSEEUG00000006148	-	100	95.614	Erinaceus_europaeus
ENSRNOG00000018761	Eif3c	99	73.965	ENSELUG00000022257	eif3c	92	82.421	Esox_lucius
ENSRNOG00000018761	Eif3c	100	96.933	ENSFCAG00000015782	-	100	96.933	Felis_catus
ENSRNOG00000018761	Eif3c	100	96.714	ENSFDAG00000003588	-	100	96.714	Fukomys_damarensis
ENSRNOG00000018761	Eif3c	99	75.000	ENSFHEG00000014154	EIF3C	98	75.000	Fundulus_heteroclitus
ENSRNOG00000018761	Eif3c	97	73.288	ENSGMOG00000016885	eif3c	99	74.550	Gadus_morhua
ENSRNOG00000018761	Eif3c	96	75.596	ENSGACG00000007652	eif3c	100	74.891	Gasterosteus_aculeatus
ENSRNOG00000018761	Eif3c	92	82.840	ENSGAGG00000006666	-	100	82.033	Gopherus_agassizii
ENSRNOG00000018761	Eif3c	53	94.595	ENSGGOG00000022677	-	100	94.595	Gorilla_gorilla
ENSRNOG00000018761	Eif3c	99	93.736	ENSGGOG00000026919	EIF3C	100	96.018	Gorilla_gorilla
ENSRNOG00000018761	Eif3c	100	96.824	ENSHGLG00000011445	EIF3C	100	96.824	Heterocephalus_glaber_female
ENSRNOG00000018761	Eif3c	100	96.824	ENSHGLG00100000217	EIF3C	100	96.824	Heterocephalus_glaber_male
ENSRNOG00000018761	Eif3c	99	75.109	ENSHCOG00000019694	eif3c	98	75.109	Hippocampus_comes
ENSRNOG00000018761	Eif3c	99	75.000	ENSIPUG00000016878	eif3c	98	75.817	Ictalurus_punctatus
ENSRNOG00000018761	Eif3c	100	96.933	ENSSTOG00000021278	-	100	96.933	Ictidomys_tridecemlineatus
ENSRNOG00000018761	Eif3c	100	96.824	ENSJJAG00000012722	Eif3c	100	96.824	Jaculus_jaculus
ENSRNOG00000018761	Eif3c	99	75.607	ENSKMAG00000021662	eif3c	97	74.239	Kryptolebias_marmoratus
ENSRNOG00000018761	Eif3c	99	74.447	ENSLBEG00000023370	eif3c	99	73.434	Labrus_bergylta
ENSRNOG00000018761	Eif3c	100	77.620	ENSLACG00000000770	eif3c	100	79.171	Latimeria_chalumnae
ENSRNOG00000018761	Eif3c	100	95.947	ENSLAFG00000027426	-	100	95.947	Loxodonta_africana
ENSRNOG00000018761	Eif3c	100	96.057	ENSMFAG00000041930	-	100	96.057	Macaca_fascicularis
ENSRNOG00000018761	Eif3c	100	96.057	ENSMMUG00000011798	-	100	96.057	Macaca_mulatta
ENSRNOG00000018761	Eif3c	100	96.057	ENSMNEG00000023915	-	100	96.057	Macaca_nemestrina
ENSRNOG00000018761	Eif3c	100	96.057	ENSMLEG00000027529	-	100	96.057	Mandrillus_leucophaeus
ENSRNOG00000018761	Eif3c	99	77.645	ENSMAMG00000012512	eif3c	95	83.667	Mastacembelus_armatus
ENSRNOG00000018761	Eif3c	84	80.130	ENSMZEG00005013685	eif3c	92	80.130	Maylandia_zebra
ENSRNOG00000018761	Eif3c	99	71.444	ENSMZEG00005013699	eif3c	89	82.810	Maylandia_zebra
ENSRNOG00000018761	Eif3c	100	98.246	ENSMAUG00000010621	Eif3c	100	98.246	Mesocricetus_auratus
ENSRNOG00000018761	Eif3c	100	96.605	ENSMICG00000036748	-	100	96.605	Microcebus_murinus
ENSRNOG00000018761	Eif3c	100	95.943	ENSMOCG00000004204	Eif3c	100	96.053	Microtus_ochrogaster
ENSRNOG00000018761	Eif3c	100	71.162	ENSMMOG00000001572	eif3c	94	82.178	Mola_mola
ENSRNOG00000018761	Eif3c	100	93.217	ENSMODG00000015579	-	100	93.217	Monodelphis_domestica
ENSRNOG00000018761	Eif3c	84	83.582	ENSMALG00000008907	eif3c	92	83.444	Monopterus_albus
ENSRNOG00000018761	Eif3c	100	99.012	MGP_CAROLIEiJ_G0030451	Eif3c	100	99.012	Mus_caroli
ENSRNOG00000018761	Eif3c	100	99.012	ENSMUSG00000030738	Eif3c	100	99.012	Mus_musculus
ENSRNOG00000018761	Eif3c	100	98.902	MGP_PahariEiJ_G0013661	Eif3c	100	98.902	Mus_pahari
ENSRNOG00000018761	Eif3c	100	99.012	MGP_SPRETEiJ_G0031565	Eif3c	100	99.012	Mus_spretus
ENSRNOG00000018761	Eif3c	96	96.477	ENSMPUG00000012732	-	100	96.477	Mustela_putorius_furo
ENSRNOG00000018761	Eif3c	100	95.838	ENSMLUG00000015558	-	100	95.838	Myotis_lucifugus
ENSRNOG00000018761	Eif3c	100	98.138	ENSNGAG00000007177	-	100	98.138	Nannospalax_galili
ENSRNOG00000018761	Eif3c	93	89.091	ENSNGAG00000010901	-	98	89.091	Nannospalax_galili
ENSRNOG00000018761	Eif3c	100	81.622	ENSNLEG00000001425	-	91	91.667	Nomascus_leucogenys
ENSRNOG00000018761	Eif3c	100	75.847	ENSMEUG00000009939	-	99	76.310	Notamacropus_eugenii
ENSRNOG00000018761	Eif3c	89	59.615	ENSMEUG00000005317	-	95	71.552	Notamacropus_eugenii
ENSRNOG00000018761	Eif3c	100	96.276	ENSOPRG00000000931	-	100	96.276	Ochotona_princeps
ENSRNOG00000018761	Eif3c	100	96.714	ENSODEG00000013508	-	100	96.714	Octodon_degus
ENSRNOG00000018761	Eif3c	66	62.541	ENSONIG00000011434	eif3c	99	62.541	Oreochromis_niloticus
ENSRNOG00000018761	Eif3c	100	89.116	ENSOANG00000011410	-	100	89.871	Ornithorhynchus_anatinus
ENSRNOG00000018761	Eif3c	100	96.933	ENSOCUG00000022489	-	100	96.933	Oryctolagus_cuniculus
ENSRNOG00000018761	Eif3c	99	74.279	ENSORLG00000006318	eif3c	95	73.684	Oryzias_latipes
ENSRNOG00000018761	Eif3c	99	74.279	ENSORLG00020015713	eif3c	91	81.864	Oryzias_latipes_hni
ENSRNOG00000018761	Eif3c	99	74.169	ENSORLG00015013772	eif3c	97	73.731	Oryzias_latipes_hsok
ENSRNOG00000018761	Eif3c	100	74.138	ENSOMEG00000020450	eif3c	100	73.707	Oryzias_melastigma
ENSRNOG00000018761	Eif3c	100	96.276	ENSOGAG00000012737	-	100	96.276	Otolemur_garnettii
ENSRNOG00000018761	Eif3c	100	96.933	ENSOARG00000002892	-	100	96.933	Ovis_aries
ENSRNOG00000018761	Eif3c	100	96.933	ENSPPRG00000012336	-	100	96.933	Panthera_pardus
ENSRNOG00000018761	Eif3c	100	96.933	ENSPTIG00000011712	-	100	96.933	Panthera_tigris_altaica
ENSRNOG00000018761	Eif3c	100	96.057	ENSPANG00000021151	-	100	96.057	Papio_anubis
ENSRNOG00000018761	Eif3c	99	75.054	ENSPKIG00000002049	eif3c	98	74.510	Paramormyrops_kingsleyae
ENSRNOG00000018761	Eif3c	89	83.748	ENSPMGG00000005409	eif3c	94	83.748	Periophthalmus_magnuspinnatus
ENSRNOG00000018761	Eif3c	100	97.039	ENSPEMG00000010899	Eif3c	100	97.039	Peromyscus_maniculatus_bairdii
ENSRNOG00000018761	Eif3c	100	92.560	ENSPCIG00000025206	-	100	93.326	Phascolarctos_cinereus
ENSRNOG00000018761	Eif3c	99	74.457	ENSPFOG00000004476	eif3c	98	73.993	Poecilia_formosa
ENSRNOG00000018761	Eif3c	100	70.897	ENSPLAG00000017480	eif3c	98	74.441	Poecilia_latipinna
ENSRNOG00000018761	Eif3c	99	75.082	ENSPMEG00000019512	eif3c	98	74.183	Poecilia_mexicana
ENSRNOG00000018761	Eif3c	100	92.990	ENSPPYG00000007227	-	100	92.990	Pongo_abelii
ENSRNOG00000018761	Eif3c	66	97.504	ENSPCAG00000012710	-	100	97.504	Procavia_capensis
ENSRNOG00000018761	Eif3c	100	96.714	ENSPCOG00000019289	-	100	96.714	Propithecus_coquereli
ENSRNOG00000018761	Eif3c	100	96.386	ENSPVAG00000005804	-	100	96.386	Pteropus_vampyrus
ENSRNOG00000018761	Eif3c	50	78.788	ENSPNYG00000016530	eif3c	81	78.788	Pundamilia_nyererei
ENSRNOG00000018761	Eif3c	99	75.602	ENSPNAG00000024040	eif3c	99	75.847	Pygocentrus_nattereri
ENSRNOG00000018761	Eif3c	97	95.923	ENSRBIG00000044009	-	98	91.419	Rhinopithecus_bieti
ENSRNOG00000018761	Eif3c	100	96.057	ENSRROG00000043626	-	100	96.057	Rhinopithecus_roxellana
ENSRNOG00000018761	Eif3c	70	30.970	YMR309C	-	81	30.297	Saccharomyces_cerevisiae
ENSRNOG00000018761	Eif3c	100	96.276	ENSSBOG00000032155	-	100	96.276	Saimiri_boliviensis_boliviensis
ENSRNOG00000018761	Eif3c	96	92.072	ENSSHAG00000011808	-	100	92.865	Sarcophilus_harrisii
ENSRNOG00000018761	Eif3c	99	74.726	ENSSFOG00015021823	eif3c	98	75.274	Scleropages_formosus
ENSRNOG00000018761	Eif3c	97	75.591	ENSSMAG00000016638	eif3c	97	75.703	Scophthalmus_maximus
ENSRNOG00000018761	Eif3c	99	76.009	ENSSDUG00000023117	eif3c	98	75.245	Seriola_dumerili
ENSRNOG00000018761	Eif3c	99	75.682	ENSSLDG00000009706	eif3c	93	83.007	Seriola_lalandi_dorsalis
ENSRNOG00000018761	Eif3c	100	83.917	ENSSPUG00000016470	-	100	83.698	Sphenodon_punctatus
ENSRNOG00000018761	Eif3c	100	75.626	ENSSPAG00000000426	eif3c	100	75.190	Stegastes_partitus
ENSRNOG00000018761	Eif3c	100	96.933	ENSSSCG00000034927	-	100	96.933	Sus_scrofa
ENSRNOG00000018761	Eif3c	99	73.712	ENSTRUG00000008951	eif3c	99	73.605	Takifugu_rubripes
ENSRNOG00000018761	Eif3c	100	73.341	ENSTNIG00000015210	eif3c	100	73.341	Tetraodon_nigroviridis
ENSRNOG00000018761	Eif3c	100	96.495	ENSTTRG00000005880	-	100	96.495	Tursiops_truncatus
ENSRNOG00000018761	Eif3c	72	98.015	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSRNOG00000018761	Eif3c	100	97.043	ENSUMAG00000010927	-	100	97.043	Ursus_maritimus
ENSRNOG00000018761	Eif3c	100	95.509	ENSVVUG00000025970	-	100	95.509	Vulpes_vulpes
ENSRNOG00000018761	Eif3c	100	77.165	ENSXETG00000002941	eif3c	100	77.056	Xenopus_tropicalis
ENSRNOG00000018761	Eif3c	100	74.270	ENSXMAG00000013796	eif3c	100	73.838	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001732	formation of cytoplasmic translation initiation complex	-	IEA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003743	translation initiation factor activity	-	ISS	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	21873635.	IBA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	-	ISO	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	-	ISS	Component
GO:0006413	translational initiation	21873635.	IBA	Process
GO:0006413	translational initiation	-	ISO	Process
GO:0006413	translational initiation	-	ISS	Process
GO:0008150	biological_process	-	ND	Process
GO:0016282	eukaryotic 43S preinitiation complex	-	IEA	Component
GO:0031369	translation initiation factor binding	21873635.	IBA	Function
GO:0033290	eukaryotic 48S preinitiation complex	-	IEA	Component
GO:0045727	positive regulation of translation	-	ISO	Process
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	-	IEA	Component
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	-	ISO	Component
GO:1902416	positive regulation of mRNA binding	-	ISO	Process