EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000019059 (Gene tree)
Gene ID: 498952
Gene Symbol: Zfp1
Alias: LOC498952|RGD1565049
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3589 bases
Position: chr19:43882249-43885837
Accession: 1565049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	1	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	2	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	3	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	4	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	5	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	6	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	7	8
ENSRNOP00000025761	zf-C2H2	PF00096.26	5.5e-52	8	8
ENSRNOP00000025761	zf-met	PF12874.7	7.3e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025761	-	1209	XM_006255657	ENSRNOP00000025761	402 (aa)	XP_006255719	F1LXE4

Gene Model

Click here to download ENSRNOG00000019059's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000019059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000019059	Zfp1	99	51.528	ENSRNOG00000019416	Zfp61	97	51.528
ENSRNOG00000019059	Zfp1	79	52.703	ENSRNOG00000029490	Znf768	51	52.466
ENSRNOG00000019059	Zfp1	73	57.078	ENSRNOG00000015188	AABR07053681.1	70	57.078
ENSRNOG00000019059	Zfp1	75	35.714	ENSRNOG00000013460	Zfp319	99	35.714
ENSRNOG00000019059	Zfp1	100	46.847	ENSRNOG00000006684	Zfp317	91	46.729
ENSRNOG00000019059	Zfp1	99	50.980	ENSRNOG00000025937	Zfp26	96	50.980
ENSRNOG00000019059	Zfp1	55	43.802	ENSRNOG00000007576	Zfp597	96	43.802
ENSRNOG00000019059	Zfp1	73	44.660	ENSRNOG00000008239	Repin1	92	44.660
ENSRNOG00000019059	Zfp1	84	48.696	ENSRNOG00000002713	Zfp672	89	48.696
ENSRNOG00000019059	Zfp1	71	33.103	ENSRNOG00000014658	Zfp423	88	36.111
ENSRNOG00000019059	Zfp1	99	46.559	ENSRNOG00000016417	Zfp136	99	46.559
ENSRNOG00000019059	Zfp1	99	38.313	ENSRNOG00000022431	Zfp867	97	37.805
ENSRNOG00000019059	Zfp1	99	55.217	ENSRNOG00000014712	Zfp39	92	55.217
ENSRNOG00000019059	Zfp1	75	50.413	ENSRNOG00000061533	AABR07001926.3	87	50.413
ENSRNOG00000019059	Zfp1	78	41.892	ENSRNOG00000023679	Prdm5	72	41.892
ENSRNOG00000019059	Zfp1	79	51.440	ENSRNOG00000024056	Zfp17	76	51.440
ENSRNOG00000019059	Zfp1	88	43.448	ENSRNOG00000016719	Zfp161	57	43.448
ENSRNOG00000019059	Zfp1	80	54.783	ENSRNOG00000014331	Zfp810	83	54.783
ENSRNOG00000019059	Zfp1	83	51.029	ENSRNOG00000048394	Zfp560	73	51.029
ENSRNOG00000019059	Zfp1	84	55.556	ENSRNOG00000003455	Zfp13	56	55.556
ENSRNOG00000019059	Zfp1	91	55.000	ENSRNOG00000030308	Zfp251	76	55.000
ENSRNOG00000019059	Zfp1	65	40.000	ENSRNOG00000047699	Snai2	56	40.000
ENSRNOG00000019059	Zfp1	81	54.733	ENSRNOG00000032625	AC118165.1	100	55.157
ENSRNOG00000019059	Zfp1	99	53.498	ENSRNOG00000052406	LOC102552527	99	53.498
ENSRNOG00000019059	Zfp1	99	48.450	ENSRNOG00000043341	Zfp51	98	48.450
ENSRNOG00000019059	Zfp1	80	54.733	ENSRNOG00000042777	Zfp28	63	54.733
ENSRNOG00000019059	Zfp1	75	43.210	ENSRNOG00000028628	LOC100911196	78	39.286
ENSRNOG00000019059	Zfp1	60	40.000	ENSRNOG00000055761	Zfp574	71	40.000
ENSRNOG00000019059	Zfp1	99	46.058	ENSRNOG00000049259	LOC102549842	100	46.058
ENSRNOG00000019059	Zfp1	57	44.086	ENSRNOG00000016279	Zfp865	69	44.086
ENSRNOG00000019059	Zfp1	99	56.846	ENSRNOG00000030517	Zfp879	97	56.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000019059	Zfp1	99	86.500	ENSG00000184517	ZFP1	99	85.714	Homo_sapiens
ENSRNOG00000019059	Zfp1	100	83.871	ENSAMEG00000001261	ZFP1	98	83.871	Ailuropoda_melanoleuca
ENSRNOG00000019059	Zfp1	99	86.500	ENSANAG00000028644	ZFP1	98	86.500	Aotus_nancymaae
ENSRNOG00000019059	Zfp1	100	84.901	ENSBTAG00000000868	ZFP1	99	84.901	Bos_taurus
ENSRNOG00000019059	Zfp1	99	86.250	ENSCJAG00000014349	ZFP1	98	86.250	Callithrix_jacchus
ENSRNOG00000019059	Zfp1	99	84.461	ENSCAFG00000020085	ZFP1	98	84.461	Canis_familiaris
ENSRNOG00000019059	Zfp1	99	84.080	ENSCAFG00020001547	ZFP1	98	84.080	Canis_lupus_dingo
ENSRNOG00000019059	Zfp1	99	84.539	ENSCHIG00000015281	ZFP1	98	84.539	Capra_hircus
ENSRNOG00000019059	Zfp1	99	85.250	ENSTSYG00000029077	ZFP1	98	85.250	Carlito_syrichta
ENSRNOG00000019059	Zfp1	99	83.123	ENSCPOG00000000634	ZFP1	99	83.123	Cavia_porcellus
ENSRNOG00000019059	Zfp1	99	86.000	ENSCCAG00000031497	ZFP1	99	85.750	Cebus_capucinus
ENSRNOG00000019059	Zfp1	99	87.250	ENSCATG00000039477	ZFP1	98	87.250	Cercocebus_atys
ENSRNOG00000019059	Zfp1	89	83.193	ENSCLAG00000004223	ZFP1	99	83.193	Chinchilla_lanigera
ENSRNOG00000019059	Zfp1	99	86.717	ENSCSAG00000003718	ZFP1	98	86.717	Chlorocebus_sabaeus
ENSRNOG00000019059	Zfp1	99	77.889	ENSCHOG00000003880	ZFP1	98	77.889	Choloepus_hoffmanni
ENSRNOG00000019059	Zfp1	99	86.750	ENSCANG00000038483	ZFP1	98	86.750	Colobus_angolensis_palliatus
ENSRNOG00000019059	Zfp1	100	90.547	ENSCGRG00001010967	Zfp1	99	90.547	Cricetulus_griseus_chok1gshd
ENSRNOG00000019059	Zfp1	99	90.476	ENSCGRG00000016788	-	99	90.476	Cricetulus_griseus_crigri
ENSRNOG00000019059	Zfp1	87	78.510	ENSDNOG00000010525	-	99	78.510	Dasypus_novemcinctus
ENSRNOG00000019059	Zfp1	89	83.473	ENSDNOG00000006405	-	99	83.473	Dasypus_novemcinctus
ENSRNOG00000019059	Zfp1	99	82.915	ENSDORG00000011934	Zfp1	99	82.915	Dipodomys_ordii
ENSRNOG00000019059	Zfp1	100	84.577	ENSEASG00005013460	ZFP1	98	84.577	Equus_asinus_asinus
ENSRNOG00000019059	Zfp1	100	84.577	ENSECAG00000014727	ZFP1	98	84.577	Equus_caballus
ENSRNOG00000019059	Zfp1	99	84.500	ENSFCAG00000024047	ZFP1	98	84.500	Felis_catus
ENSRNOG00000019059	Zfp1	99	86.000	ENSGGOG00000006121	ZFP1	98	86.000	Gorilla_gorilla
ENSRNOG00000019059	Zfp1	99	86.146	ENSHGLG00000016406	-	99	86.146	Heterocephalus_glaber_female
ENSRNOG00000019059	Zfp1	99	84.887	ENSHGLG00100004688	-	99	84.887	Heterocephalus_glaber_male
ENSRNOG00000019059	Zfp1	91	85.014	ENSSTOG00000022317	ZFP1	99	85.014	Ictidomys_tridecemlineatus
ENSRNOG00000019059	Zfp1	100	84.577	ENSJJAG00000019878	Zfp1	99	84.577	Jaculus_jaculus
ENSRNOG00000019059	Zfp1	99	83.459	ENSLAFG00000003125	ZFP1	100	83.459	Loxodonta_africana
ENSRNOG00000019059	Zfp1	99	87.250	ENSMFAG00000001812	ZFP1	98	87.250	Macaca_fascicularis
ENSRNOG00000019059	Zfp1	99	87.250	ENSMMUG00000011587	ZFP1	98	87.250	Macaca_mulatta
ENSRNOG00000019059	Zfp1	99	87.250	ENSMNEG00000041941	ZFP1	98	87.250	Macaca_nemestrina
ENSRNOG00000019059	Zfp1	99	87.250	ENSMLEG00000021950	ZFP1	98	87.250	Mandrillus_leucophaeus
ENSRNOG00000019059	Zfp1	99	88.693	ENSMAUG00000007745	Zfp1	99	88.693	Mesocricetus_auratus
ENSRNOG00000019059	Zfp1	99	85.250	ENSMICG00000015124	ZFP1	98	85.250	Microcebus_murinus
ENSRNOG00000019059	Zfp1	99	87.218	ENSMOCG00000002761	Zfp1	100	87.218	Microtus_ochrogaster
ENSRNOG00000019059	Zfp1	99	92.481	MGP_CAROLIEiJ_G0031579	Zfp1	99	92.481	Mus_caroli
ENSRNOG00000019059	Zfp1	99	92.231	ENSMUSG00000055835	Zfp1	100	91.892	Mus_musculus
ENSRNOG00000019059	Zfp1	99	91.479	MGP_PahariEiJ_G0023178	Zfp1	99	91.479	Mus_pahari
ENSRNOG00000019059	Zfp1	99	91.729	MGP_SPRETEiJ_G0032697	Zfp1	99	91.729	Mus_spretus
ENSRNOG00000019059	Zfp1	99	83.500	ENSMPUG00000009946	ZFP1	98	83.500	Mustela_putorius_furo
ENSRNOG00000019059	Zfp1	100	81.841	ENSMLUG00000002042	ZFP1	99	81.841	Myotis_lucifugus
ENSRNOG00000019059	Zfp1	100	85.608	ENSNGAG00000016319	Zfp1	99	85.608	Nannospalax_galili
ENSRNOG00000019059	Zfp1	99	86.250	ENSNLEG00000013001	ZFP1	98	86.250	Nomascus_leucogenys
ENSRNOG00000019059	Zfp1	99	80.402	ENSOPRG00000006123	ZFP1	98	80.402	Ochotona_princeps
ENSRNOG00000019059	Zfp1	99	84.383	ENSODEG00000014404	ZFP1	99	84.383	Octodon_degus
ENSRNOG00000019059	Zfp1	99	81.612	ENSOCUG00000001924	ZFP1	99	81.612	Oryctolagus_cuniculus
ENSRNOG00000019059	Zfp1	100	84.119	ENSOGAG00000001902	ZFP1	98	84.119	Otolemur_garnettii
ENSRNOG00000019059	Zfp1	99	84.788	ENSOARG00000006461	ZFP1	98	84.788	Ovis_aries
ENSRNOG00000019059	Zfp1	99	86.000	ENSPPAG00000033168	ZFP1	98	86.000	Pan_paniscus
ENSRNOG00000019059	Zfp1	99	84.500	ENSPPRG00000007804	ZFP1	98	84.500	Panthera_pardus
ENSRNOG00000019059	Zfp1	99	84.000	ENSPTIG00000009843	ZFP1	98	84.000	Panthera_tigris_altaica
ENSRNOG00000019059	Zfp1	99	86.500	ENSPTRG00000008354	ZFP1	98	86.500	Pan_troglodytes
ENSRNOG00000019059	Zfp1	99	87.000	ENSPANG00000016568	ZFP1	98	87.000	Papio_anubis
ENSRNOG00000019059	Zfp1	99	86.000	ENSPPYG00000007556	ZFP1	98	86.000	Pongo_abelii
ENSRNOG00000019059	Zfp1	99	83.459	ENSPCAG00000007561	ZFP1	98	83.459	Procavia_capensis
ENSRNOG00000019059	Zfp1	92	83.827	ENSPCOG00000023041	ZFP1	99	83.827	Propithecus_coquereli
ENSRNOG00000019059	Zfp1	99	87.000	ENSRBIG00000039257	ZFP1	98	87.000	Rhinopithecus_bieti
ENSRNOG00000019059	Zfp1	99	87.000	ENSRROG00000042823	ZFP1	98	87.000	Rhinopithecus_roxellana
ENSRNOG00000019059	Zfp1	99	86.250	ENSSBOG00000020206	ZFP1	99	86.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000019059	Zfp1	100	82.178	ENSSARG00000013922	ZFP1	99	82.178	Sorex_araneus
ENSRNOG00000019059	Zfp1	99	84.788	ENSSSCG00000022668	ZFP1	98	84.788	Sus_scrofa
ENSRNOG00000019059	Zfp1	88	83.754	ENSTBEG00000011217	ZFP1	99	83.754	Tupaia_belangeri
ENSRNOG00000019059	Zfp1	99	84.962	ENSTTRG00000008949	ZFP1	98	84.962	Tursiops_truncatus
ENSRNOG00000019059	Zfp1	100	84.367	ENSUAMG00000017632	ZFP1	99	84.367	Ursus_americanus
ENSRNOG00000019059	Zfp1	100	84.367	ENSUMAG00000014322	ZFP1	99	84.367	Ursus_maritimus
ENSRNOG00000019059	Zfp1	88	83.193	ENSVPAG00000012526	ZFP1	99	83.193	Vicugna_pacos
ENSRNOG00000019059	Zfp1	99	84.328	ENSVVUG00000024277	ZFP1	98	84.328	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function