EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000019175 (Gene tree)
Gene ID: 361197
Gene Symbol: Ercc6l2
Alias: LOC361197|RGD1561537
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 116670 bases
Position: chr17:1305016-1421685
Accession: 1561537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000025965	ResIII	PF04851.15	7e-11	1	1
ENSRNOP00000025965	DEAD	PF00270.29	9.1e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000025965	-	5569	XM_006222306	ENSRNOP00000025965	1532 (aa)	XP_006222368	D3ZPU4

Gene Model

Click here to download ENSRNOG00000019175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000019175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000019175	Ercc6l2	78	59.294	ENSATEG00000016700	ercc6l2	85	59.287	Anabas_testudineus
ENSRNOG00000019175	Ercc6l2	57	57.088	ENSACLG00000015088	ercc6l2	85	57.088	Astatotilapia_calliptera
ENSRNOG00000019175	Ercc6l2	62	78.378	ENSCAFG00000001219	ERCC6L2	99	78.205	Canis_familiaris
ENSRNOG00000019175	Ercc6l2	98	69.947	ENSCPOG00000004544	-	90	87.617	Cavia_porcellus
ENSRNOG00000019175	Ercc6l2	99	56.362	ENSCPBG00000005414	ERCC6L2	99	56.362	Chrysemys_picta_bellii
ENSRNOG00000019175	Ercc6l2	54	87.425	ENSCGRG00000015854	Ercc6l2	99	87.425	Cricetulus_griseus_crigri
ENSRNOG00000019175	Ercc6l2	59	66.102	ENSDARG00000012403	ercc6l2	71	66.102	Danio_rerio
ENSRNOG00000019175	Ercc6l2	79	58.028	ENSELUG00000002272	ercc6l2	84	58.302	Esox_lucius
ENSRNOG00000019175	Ercc6l2	66	71.483	ENSFALG00000003400	ERCC6L2	87	71.483	Ficedula_albicollis
ENSRNOG00000019175	Ercc6l2	88	45.699	ENSFHEG00000017890	ercc6l2	74	55.569	Fundulus_heteroclitus
ENSRNOG00000019175	Ercc6l2	58	58.008	ENSGMOG00000007751	ercc6l2	87	58.008	Gadus_morhua
ENSRNOG00000019175	Ercc6l2	98	52.703	ENSGALG00000012621	ERCC6L2	99	52.716	Gallus_gallus
ENSRNOG00000019175	Ercc6l2	87	45.755	ENSGAFG00000012386	ercc6l2	74	55.164	Gambusia_affinis
ENSRNOG00000019175	Ercc6l2	60	58.048	ENSGACG00000006992	ercc6l2	87	58.175	Gasterosteus_aculeatus
ENSRNOG00000019175	Ercc6l2	99	55.106	ENSGAGG00000021675	ERCC6L2	99	55.363	Gopherus_agassizii
ENSRNOG00000019175	Ercc6l2	78	57.396	ENSIPUG00000000283	ercc6l2	92	57.396	Ictalurus_punctatus
ENSRNOG00000019175	Ercc6l2	78	56.272	ENSLBEG00000003016	ercc6l2	78	52.376	Labrus_bergylta
ENSRNOG00000019175	Ercc6l2	98	52.235	ENSLACG00000011767	ERCC6L2	99	52.289	Latimeria_chalumnae
ENSRNOG00000019175	Ercc6l2	99	83.388	ENSMAUG00000004820	-	100	87.679	Mesocricetus_auratus
ENSRNOG00000019175	Ercc6l2	99	82.230	ENSMOCG00000019362	-	100	88.361	Microtus_ochrogaster
ENSRNOG00000019175	Ercc6l2	63	53.961	ENSMMOG00000001419	ercc6l2	82	53.961	Mola_mola
ENSRNOG00000019175	Ercc6l2	69	56.865	ENSMALG00000016933	ercc6l2	84	58.537	Monopterus_albus
ENSRNOG00000019175	Ercc6l2	55	93.230	MGP_CAROLIEiJ_G0018635	-	99	96.047	Mus_caroli
ENSRNOG00000019175	Ercc6l2	55	93.824	MGP_PahariEiJ_G0019699	-	99	96.633	Mus_pahari
ENSRNOG00000019175	Ercc6l2	55	93.705	MGP_SPRETEiJ_G0019515	-	99	96.486	Mus_spretus
ENSRNOG00000019175	Ercc6l2	60	79.854	ENSMPUG00000006738	ERCC6L2	99	79.854	Mustela_putorius_furo
ENSRNOG00000019175	Ercc6l2	55	83.175	ENSNGAG00000016174	Ercc6l2	98	90.497	Nannospalax_galili
ENSRNOG00000019175	Ercc6l2	99	68.673	ENSOCUG00000000442	-	99	88.600	Oryctolagus_cuniculus
ENSRNOG00000019175	Ercc6l2	73	60.053	ENSORLG00000004287	ercc6l2	92	55.374	Oryzias_latipes
ENSRNOG00000019175	Ercc6l2	65	61.878	ENSORLG00020002133	ercc6l2	90	56.747	Oryzias_latipes_hni
ENSRNOG00000019175	Ercc6l2	59	61.864	ENSORLG00015010250	ercc6l2	83	56.379	Oryzias_latipes_hsok
ENSRNOG00000019175	Ercc6l2	79	55.985	ENSOMEG00000021983	ercc6l2	90	56.077	Oryzias_melastigma
ENSRNOG00000019175	Ercc6l2	63	86.639	ENSOGAG00000003146	ERCC6L2	98	79.365	Otolemur_garnettii
ENSRNOG00000019175	Ercc6l2	82	76.303	ENSOARG00000008546	ERCC6L2	99	78.217	Ovis_aries
ENSRNOG00000019175	Ercc6l2	69	65.335	ENSPKIG00000016799	ercc6l2	84	59.680	Paramormyrops_kingsleyae
ENSRNOG00000019175	Ercc6l2	72	56.799	ENSPMGG00000016547	ercc6l2	89	56.799	Periophthalmus_magnuspinnatus
ENSRNOG00000019175	Ercc6l2	99	85.517	ENSPEMG00000006631	-	100	88.796	Peromyscus_maniculatus_bairdii
ENSRNOG00000019175	Ercc6l2	77	65.617	ENSPCIG00000020095	-	97	66.924	Phascolarctos_cinereus
ENSRNOG00000019175	Ercc6l2	70	56.479	ENSPFOG00000019333	ercc6l2	73	56.479	Poecilia_formosa
ENSRNOG00000019175	Ercc6l2	68	56.890	ENSPREG00000016702	ercc6l2	71	56.890	Poecilia_reticulata
ENSRNOG00000019175	Ercc6l2	99	67.548	ENSPPYG00000019412	-	99	67.827	Pongo_abelii
ENSRNOG00000019175	Ercc6l2	59	54.237	ENSPNYG00000015347	ercc6l2	85	54.237	Pundamilia_nyererei
ENSRNOG00000019175	Ercc6l2	51	64.645	ENSPNAG00000011413	ercc6l2	90	58.682	Pygocentrus_nattereri
ENSRNOG00000019175	Ercc6l2	60	65.265	ENSSFOG00015006394	ercc6l2	70	60.749	Scleropages_formosus
ENSRNOG00000019175	Ercc6l2	75	46.102	ENSSLDG00000018663	ercc6l2	79	57.819	Seriola_lalandi_dorsalis
ENSRNOG00000019175	Ercc6l2	99	54.065	ENSSPUG00000004336	ERCC6L2	98	57.214	Sphenodon_punctatus
ENSRNOG00000019175	Ercc6l2	78	45.388	ENSSPAG00000004484	ercc6l2	86	53.918	Stegastes_partitus
ENSRNOG00000019175	Ercc6l2	64	54.919	ENSTRUG00000014634	ercc6l2	79	69.767	Takifugu_rubripes
ENSRNOG00000019175	Ercc6l2	67	65.878	ENSXETG00000014835	ercc6l2	95	63.853	Xenopus_tropicalis
ENSRNOG00000019175	Ercc6l2	87	45.967	ENSXMAG00000023695	ercc6l2	72	56.235	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0019901	protein kinase binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034614	cellular response to reactive oxygen species	-	ISO	Process
GO:0036297	interstrand cross-link repair	-	ISO	Process