EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000019235 (Gene tree)
Gene ID
307410
Gene Symbol
Rbm22
Alias
LOC307410|MGC116134
Full Name
RNA binding motif protein 22
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
10809 bases
Position
chr18:55828158-55838966
Accession
1305770
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000026087RRM_1PF00076.221.7e-1011
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000026087-1696-ENSRNOP00000026087420 (aa)-Q4V7D7
Gene Model
Click here to download ENSRNOG00000019235's gene model file
Pathways
Pathway IDPathway NameSource
rno03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000019235's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000019235Rbm2210099.524ENSG00000086589RBM2210099.524Homo_sapiens
ENSRNOG00000019235Rbm229985.142ENSAPOG00000010338rbm229986.085Acanthochromis_polyacanthus
ENSRNOG00000019235Rbm2210099.524ENSAMEG00000004544RBM2210099.524Ailuropoda_melanoleuca
ENSRNOG00000019235Rbm229979.118ENSACIG00000016372rbm229979.582Amphilophus_citrinellus
ENSRNOG00000019235Rbm229985.142ENSAOCG00000007179rbm229986.085Amphiprion_ocellaris
ENSRNOG00000019235Rbm229985.142ENSAPEG00000016689rbm229986.085Amphiprion_percula
ENSRNOG00000019235Rbm229984.870ENSATEG00000008286rbm229985.377Anabas_testudineus
ENSRNOG00000019235Rbm229993.976ENSAPLG00000016408RBM229993.976Anas_platyrhynchos
ENSRNOG00000019235Rbm2210097.150ENSACAG00000014750RBM2210097.150Anolis_carolinensis
ENSRNOG00000019235Rbm2210099.286ENSANAG00000033743-10099.286Aotus_nancymaae
ENSRNOG00000019235Rbm229292.208ENSANAG00000019688-10092.208Aotus_nancymaae
ENSRNOG00000019235Rbm229985.476ENSACLG00000008863rbm229885.986Astatotilapia_calliptera
ENSRNOG00000019235Rbm229985.343ENSAMXG00000038080rbm229978.723Astyanax_mexicanus
ENSRNOG00000019235Rbm229983.971ENSAMXG00000018529-9984.689Astyanax_mexicanus
ENSRNOG00000019235Rbm2210099.524ENSBTAG00000030366RBM2210099.524Bos_taurus
ENSRNOG00000019235Rbm228057.681WBGene00011722rbm-228058.769Caenorhabditis_elegans
ENSRNOG00000019235Rbm229096.316ENSCJAG00000013247-8996.316Callithrix_jacchus
ENSRNOG00000019235Rbm2210099.286ENSCJAG00000020963RBM2210099.286Callithrix_jacchus
ENSRNOG00000019235Rbm2210099.052ENSCAFG00000018082RBM2210099.052Canis_familiaris
ENSRNOG00000019235Rbm2210099.524ENSCAFG00020023671RBM2210099.524Canis_lupus_dingo
ENSRNOG00000019235Rbm2210099.524ENSCHIG00000015561RBM2210099.524Capra_hircus
ENSRNOG00000019235Rbm2210099.524ENSTSYG00000003939-10099.524Carlito_syrichta
ENSRNOG00000019235Rbm228887.297ENSTSYG00000037586-10087.297Carlito_syrichta
ENSRNOG00000019235Rbm229296.401ENSCAPG00000002598RBM229696.401Cavia_aperea
ENSRNOG00000019235Rbm2210099.524ENSCPOG00000001946RBM2210099.524Cavia_porcellus
ENSRNOG00000019235Rbm2210099.286ENSCCAG00000033546RBM2210099.286Cebus_capucinus
ENSRNOG00000019235Rbm2210099.524ENSCATG00000042133RBM2210099.524Cercocebus_atys
ENSRNOG00000019235Rbm2210075.352ENSCLAG00000014221-9475.352Chinchilla_lanigera
ENSRNOG00000019235Rbm2210099.524ENSCLAG00000010842-10099.524Chinchilla_lanigera
ENSRNOG00000019235Rbm2210079.524ENSCLAG00000007106-10079.097Chinchilla_lanigera
ENSRNOG00000019235Rbm229499.492ENSCSAG00000019006-10099.492Chlorocebus_sabaeus
ENSRNOG00000019235Rbm2210099.048ENSCHOG00000001041-10099.048Choloepus_hoffmanni
ENSRNOG00000019235Rbm227199.663ENSCHOG00000004192-10099.663Choloepus_hoffmanni
ENSRNOG00000019235Rbm2210098.095ENSCHOG00000013522-10098.095Choloepus_hoffmanni
ENSRNOG00000019235Rbm2210097.619ENSCPBG00000010094RBM2210097.619Chrysemys_picta_bellii
ENSRNOG00000019235Rbm229864.269ENSCING00000005843zf(c3h)-129961.283Ciona_intestinalis
ENSRNOG00000019235Rbm229864.218ENSCSAVG00000009145-9963.270Ciona_savignyi
ENSRNOG00000019235Rbm2210099.524ENSCANG00000025232RBM2210099.524Colobus_angolensis_palliatus
ENSRNOG00000019235Rbm2210099.524ENSCGRG00001015110Rbm2210099.524Cricetulus_griseus_chok1gshd
ENSRNOG00000019235Rbm229993.765ENSCGRG00000011751Rbm229993.765Cricetulus_griseus_crigri
ENSRNOG00000019235Rbm229984.434ENSCSEG00000010790rbm229984.670Cynoglossus_semilaevis
ENSRNOG00000019235Rbm2210083.568ENSCVAG00000010670rbm229983.803Cyprinodon_variegatus
ENSRNOG00000019235Rbm2210084.038ENSDARG00000010238rbm2210084.272Danio_rerio
ENSRNOG00000019235Rbm2210099.524ENSDNOG00000011166RBM2210099.524Dasypus_novemcinctus
ENSRNOG00000019235Rbm2210077.381ENSDORG00000005329Rbm2210077.381Dipodomys_ordii
ENSRNOG00000019235Rbm229856.381FBgn0037220CG146419957.279Drosophila_melanogaster
ENSRNOG00000019235Rbm229191.489ENSEBUG00000016742-9991.489Eptatretus_burgeri
ENSRNOG00000019235Rbm2210099.524ENSEASG00005002681RBM2210099.524Equus_asinus_asinus
ENSRNOG00000019235Rbm2210090.086ENSECAG00000014940RBM2210090.086Equus_caballus
ENSRNOG00000019235Rbm2210080.238ENSEEUG00000009778-10080.238Erinaceus_europaeus
ENSRNOG00000019235Rbm2210096.667ENSEEUG00000005638-10096.667Erinaceus_europaeus
ENSRNOG00000019235Rbm229983.886ENSELUG00000001106rbm229685.106Esox_lucius
ENSRNOG00000019235Rbm2210099.524ENSFCAG00000018845RBM2210099.524Felis_catus
ENSRNOG00000019235Rbm2210096.905ENSFALG00000008051RBM2210096.905Ficedula_albicollis
ENSRNOG00000019235Rbm2210099.524ENSFDAG00000020067RBM2210099.524Fukomys_damarensis
ENSRNOG00000019235Rbm229984.798ENSFHEG00000014032rbm229885.273Fundulus_heteroclitus
ENSRNOG00000019235Rbm229983.412ENSGMOG00000010186rbm2210085.071Gadus_morhua
ENSRNOG00000019235Rbm2210096.905ENSGALG00000004555RBM2210096.905Gallus_gallus
ENSRNOG00000019235Rbm229984.198ENSGAFG00000008621rbm229984.670Gambusia_affinis
ENSRNOG00000019235Rbm229982.864ENSGACG00000018027rbm229984.038Gasterosteus_aculeatus
ENSRNOG00000019235Rbm2210097.857ENSGAGG00000024305RBM2210097.857Gopherus_agassizii
ENSRNOG00000019235Rbm2210099.524ENSGGOG00000012947RBM2210099.524Gorilla_gorilla
ENSRNOG00000019235Rbm229985.476ENSHBUG00000002941rbm229885.986Haplochromis_burtoni
ENSRNOG00000019235Rbm2210099.524ENSHGLG00000008488RBM2210099.524Heterocephalus_glaber_female
ENSRNOG00000019235Rbm229899.515ENSHGLG00100006872RBM229999.515Heterocephalus_glaber_male
ENSRNOG00000019235Rbm228786.538ENSHCOG00000016334rbm229286.575Hippocampus_comes
ENSRNOG00000019235Rbm229982.506ENSIPUG00000019751rbm229985.106Ictalurus_punctatus
ENSRNOG00000019235Rbm229981.862ENSSTOG00000029346-9881.862Ictidomys_tridecemlineatus
ENSRNOG00000019235Rbm2210084.286ENSSTOG00000027197RBM2210084.286Ictidomys_tridecemlineatus
ENSRNOG00000019235Rbm2210099.524ENSJJAG00000009565Rbm2210099.524Jaculus_jaculus
ENSRNOG00000019235Rbm229985.377ENSKMAG00000004354rbm229985.849Kryptolebias_marmoratus
ENSRNOG00000019235Rbm229986.190ENSLBEG00000027750rbm228886.429Labrus_bergylta
ENSRNOG00000019235Rbm229990.544ENSLOCG00000010989rbm229991.017Lepisosteus_oculatus
ENSRNOG00000019235Rbm2210099.524ENSLAFG00000006638RBM2210099.524Loxodonta_africana
ENSRNOG00000019235Rbm2210099.524ENSMFAG00000004034RBM2210099.524Macaca_fascicularis
ENSRNOG00000019235Rbm2210099.524ENSMMUG00000020683RBM2210099.524Macaca_mulatta
ENSRNOG00000019235Rbm2210099.524ENSMNEG00000035500RBM2210099.524Macaca_nemestrina
ENSRNOG00000019235Rbm2210099.524ENSMLEG00000034825RBM2210099.524Mandrillus_leucophaeus
ENSRNOG00000019235Rbm229985.613ENSMAMG00000007370rbm229986.085Mastacembelus_armatus
ENSRNOG00000019235Rbm229985.476ENSMZEG00005013001rbm229885.986Maylandia_zebra
ENSRNOG00000019235Rbm2210096.905ENSMGAG00000006298RBM2210096.905Meleagris_gallopavo
ENSRNOG00000019235Rbm2210099.524ENSMAUG00000001133Rbm2210099.524Mesocricetus_auratus
ENSRNOG00000019235Rbm2210099.524ENSMICG00000033712RBM2210099.524Microcebus_murinus
ENSRNOG00000019235Rbm2210092.619ENSMOCG00000018311Rbm2210092.619Microtus_ochrogaster
ENSRNOG00000019235Rbm229984.561ENSMMOG00000003192rbm229885.036Mola_mola
ENSRNOG00000019235Rbm2210097.857ENSMODG00000009574-10097.857Monodelphis_domestica
ENSRNOG00000019235Rbm229989.074ENSMODG00000006398-9990.736Monodelphis_domestica
ENSRNOG00000019235Rbm229985.142ENSMALG00000013964rbm229985.613Monopterus_albus
ENSRNOG00000019235Rbm2210099.524MGP_CAROLIEiJ_G0022307Rbm2210099.524Mus_caroli
ENSRNOG00000019235Rbm2210099.524ENSMUSG00000024604Rbm2210099.524Mus_musculus
ENSRNOG00000019235Rbm2210099.524MGP_PahariEiJ_G0019037Rbm2210099.524Mus_pahari
ENSRNOG00000019235Rbm2210099.524MGP_SPRETEiJ_G0023219Rbm2210099.524Mus_spretus
ENSRNOG00000019235Rbm2210099.524ENSMPUG00000013760RBM2210099.524Mustela_putorius_furo
ENSRNOG00000019235Rbm2210096.190ENSMLUG00000003461-10096.190Myotis_lucifugus
ENSRNOG00000019235Rbm2210099.524ENSMLUG00000009040RBM2210099.524Myotis_lucifugus
ENSRNOG00000019235Rbm2210099.524ENSNGAG00000018233Rbm2210099.524Nannospalax_galili
ENSRNOG00000019235Rbm228883.200ENSNBRG00000010458rbm229583.836Neolamprologus_brichardi
ENSRNOG00000019235Rbm2210099.524ENSNLEG00000010397-10099.524Nomascus_leucogenys
ENSRNOG00000019235Rbm2210084.048ENSMEUG00000009348-10084.048Notamacropus_eugenii
ENSRNOG00000019235Rbm228297.619ENSMEUG00000001573-8197.436Notamacropus_eugenii
ENSRNOG00000019235Rbm2210075.238ENSOPRG00000016612-10074.286Ochotona_princeps
ENSRNOG00000019235Rbm2210099.286ENSOPRG00000008481-10099.286Ochotona_princeps
ENSRNOG00000019235Rbm2210099.048ENSODEG00000005016RBM2210099.048Octodon_degus
ENSRNOG00000019235Rbm229985.036ENSONIG00000013049rbm229984.360Oreochromis_niloticus
ENSRNOG00000019235Rbm2210096.454ENSOANG00000002314RBM2210096.454Ornithorhynchus_anatinus
ENSRNOG00000019235Rbm2210099.524ENSOCUG00000011532RBM2210099.524Oryctolagus_cuniculus
ENSRNOG00000019235Rbm229984.471ENSORLG00000004975rbm229984.706Oryzias_latipes
ENSRNOG00000019235Rbm229984.471ENSORLG00020012969rbm229984.706Oryzias_latipes_hni
ENSRNOG00000019235Rbm229984.471ENSORLG00015022508rbm229984.706Oryzias_latipes_hsok
ENSRNOG00000019235Rbm229984.706ENSOMEG00000004904rbm229984.471Oryzias_melastigma
ENSRNOG00000019235Rbm2210093.587ENSOGAG00000011086RBM2210093.602Otolemur_garnettii
ENSRNOG00000019235Rbm2210097.156ENSOARG00000007633RBM2210097.156Ovis_aries
ENSRNOG00000019235Rbm2210099.524ENSPPAG00000034432RBM2210099.524Pan_paniscus
ENSRNOG00000019235Rbm2210099.524ENSPPRG00000011577RBM2210099.524Panthera_pardus
ENSRNOG00000019235Rbm2210099.524ENSPTIG00000004453RBM2210099.524Panthera_tigris_altaica
ENSRNOG00000019235Rbm2210099.524ENSPTRG00000017423RBM2210099.524Pan_troglodytes
ENSRNOG00000019235Rbm2210099.524ENSPANG00000011297RBM2210099.524Papio_anubis
ENSRNOG00000019235Rbm229986.525ENSPKIG00000010315rbm229986.998Paramormyrops_kingsleyae
ENSRNOG00000019235Rbm229386.224ENSPKIG00000019326rbm228387.945Paramormyrops_kingsleyae
ENSRNOG00000019235Rbm2210097.857ENSPSIG00000012818RBM2210097.857Pelodiscus_sinensis
ENSRNOG00000019235Rbm229979.904ENSPMGG00000017638rbm2210081.905Periophthalmus_magnuspinnatus
ENSRNOG00000019235Rbm2210099.762ENSPEMG00000001753Rbm2210099.762Peromyscus_maniculatus_bairdii
ENSRNOG00000019235Rbm227770.710ENSPMAG00000007317-9974.260Petromyzon_marinus
ENSRNOG00000019235Rbm2210084.524ENSPCIG00000015088RBM2210084.524Phascolarctos_cinereus
ENSRNOG00000019235Rbm229984.434ENSPFOG00000005625rbm229984.670Poecilia_formosa
ENSRNOG00000019235Rbm229983.962ENSPLAG00000006344rbm229983.962Poecilia_latipinna
ENSRNOG00000019235Rbm229980.425ENSPMEG00000007992rbm229983.548Poecilia_mexicana
ENSRNOG00000019235Rbm229984.198ENSPREG00000003546rbm229984.670Poecilia_reticulata
ENSRNOG00000019235Rbm2210099.524ENSPPYG00000015955RBM2210099.524Pongo_abelii
ENSRNOG00000019235Rbm229085.146ENSPCAG00000015091RBM2210085.146Procavia_capensis
ENSRNOG00000019235Rbm2210099.524ENSPVAG00000014231RBM2210099.524Pteropus_vampyrus
ENSRNOG00000019235Rbm228784.110ENSPNYG00000000380rbm229584.110Pundamilia_nyererei
ENSRNOG00000019235Rbm229985.106ENSPNAG00000002687rbm229984.906Pygocentrus_nattereri
ENSRNOG00000019235Rbm229987.321ENSPNAG00000010001-9987.799Pygocentrus_nattereri
ENSRNOG00000019235Rbm2210099.524ENSRBIG00000041683RBM2210099.524Rhinopithecus_bieti
ENSRNOG00000019235Rbm2210099.524ENSRROG00000041637RBM2210099.524Rhinopithecus_roxellana
ENSRNOG00000019235Rbm2210099.048ENSSBOG00000035400-10099.048Saimiri_boliviensis_boliviensis
ENSRNOG00000019235Rbm2210097.619ENSSHAG00000017734-10097.619Sarcophilus_harrisii
ENSRNOG00000019235Rbm229984.834ENSSFOG00015022259rbm229985.071Scleropages_formosus
ENSRNOG00000019235Rbm229986.288ENSSFOG00015014955rbm229987.943Scleropages_formosus
ENSRNOG00000019235Rbm229985.343ENSSMAG00000002921rbm229986.052Scophthalmus_maximus
ENSRNOG00000019235Rbm229985.849ENSSDUG00000003846rbm229986.321Seriola_dumerili
ENSRNOG00000019235Rbm229985.849ENSSLDG00000003804rbm229986.321Seriola_lalandi_dorsalis
ENSRNOG00000019235Rbm2252100.000ENSSARG00000003205-56100.000Sorex_araneus
ENSRNOG00000019235Rbm2210096.912ENSSPUG00000003986RBM2210096.912Sphenodon_punctatus
ENSRNOG00000019235Rbm229985.849ENSSPAG00000000383rbm229986.085Stegastes_partitus
ENSRNOG00000019235Rbm2210099.286ENSSSCG00000023231RBM2210099.286Sus_scrofa
ENSRNOG00000019235Rbm2210096.905ENSTGUG00000000850RBM2210096.905Taeniopygia_guttata
ENSRNOG00000019235Rbm229984.235ENSTRUG00000004724rbm229984.000Takifugu_rubripes
ENSRNOG00000019235Rbm2210086.667ENSTBEG00000005617RBM2210086.667Tupaia_belangeri
ENSRNOG00000019235Rbm2210099.524ENSTTRG00000012778RBM2210099.524Tursiops_truncatus
ENSRNOG00000019235Rbm2210099.524ENSUAMG00000025133RBM2210099.524Ursus_americanus
ENSRNOG00000019235Rbm2210099.524ENSUMAG00000003651RBM2210099.524Ursus_maritimus
ENSRNOG00000019235Rbm2210099.524ENSVVUG00000007193RBM2210099.524Vulpes_vulpes
ENSRNOG00000019235Rbm229987.589ENSXETG00000020435rbm229988.305Xenopus_tropicalis
ENSRNOG00000019235Rbm229980.523ENSXCOG00000003316rbm229880.998Xiphophorus_couchianus
ENSRNOG00000019235Rbm229984.798ENSXMAG00000008681rbm229885.273Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000387spliceosomal snRNP assembly21873635.IBAProcess
GO:0000974Prp19 complex21873635.IBAComponent
GO:0003674molecular_function-NDFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005737cytoplasm-ISOComponent
GO:0005737cytoplasm-ISSComponent
GO:0008150biological_process-NDProcess
GO:0017070U6 snRNA binding21873635.IBAFunction
GO:0017070U6 snRNA binding-ISOFunction
GO:0017070U6 snRNA binding-ISSFunction
GO:0033120positive regulation of RNA splicing-ISOProcess
GO:0033120positive regulation of RNA splicing-ISSProcess
GO:0035690cellular response to drug-ISOProcess
GO:0035690cellular response to drug-ISSProcess
GO:0036002pre-mRNA binding21873635.IBAFunction
GO:0036002pre-mRNA binding-ISOFunction
GO:0036002pre-mRNA binding-ISSFunction
GO:0042307positive regulation of protein import into nucleus-ISOProcess
GO:0042307positive regulation of protein import into nucleus-ISSProcess
GO:0045292mRNA cis splicing, via spliceosome-ISOProcess
GO:0045292mRNA cis splicing, via spliceosome-ISSProcess
GO:0046827positive regulation of protein export from nucleus-ISOProcess
GO:0046827positive regulation of protein export from nucleus-ISSProcess
GO:0046872metal ion binding-IEAFunction
GO:0048306calcium-dependent protein binding-IEAFunction
GO:0048306calcium-dependent protein binding-ISOFunction
GO:0071006U2-type catalytic step 1 spliceosome21873635.IBAComponent
GO:0071007U2-type catalytic step 2 spliceosome21873635.IBAComponent
GO:0071007U2-type catalytic step 2 spliceosome-ISOComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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