EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000019382 (Gene tree)
Gene ID: 316087
Gene Symbol: Zbtb47
Alias: LOC316087|RGD1562434|Zfp651
Full Name: zinc finger and BTB domain containing 47
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5522 bases
Position: chr8:130401470-130406991
Accession: 1562434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000041105	zf-C2H2	PF00096.26	1.2e-30	1	4
ENSRNOP00000041105	zf-C2H2	PF00096.26	1.2e-30	2	4
ENSRNOP00000041105	zf-C2H2	PF00096.26	1.2e-30	3	4
ENSRNOP00000041105	zf-C2H2	PF00096.26	1.2e-30	4	4
ENSRNOP00000041105	zf-met	PF12874.7	1.7e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000043346	-	2187	XM_006244165	ENSRNOP00000041105	728 (aa)	XP_006244227	D3ZQI7

Gene Model

Click here to download ENSRNOG00000019382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000019382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000019382	Zbtb47	63	30.928	ENSRNOG00000015925	Zfp131	58	31.138
ENSRNOG00000019382	Zbtb47	55	33.071	ENSRNOG00000011137	Zbtb41	58	33.071
ENSRNOG00000019382	Zbtb47	51	37.349	ENSRNOG00000004735	Gzf1	60	37.349
ENSRNOG00000019382	Zbtb47	52	39.462	ENSRNOG00000027923	Mynn	59	39.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000019382	Zbtb47	73	97.701	ENSAMEG00000012484	ZBTB47	92	93.594	Ailuropoda_melanoleuca
ENSRNOG00000019382	Zbtb47	96	61.592	ENSATEG00000009048	zbtb47b	89	61.196	Anabas_testudineus
ENSRNOG00000019382	Zbtb47	79	91.803	ENSTSYG00000029574	ZBTB47	82	91.803	Carlito_syrichta
ENSRNOG00000019382	Zbtb47	98	71.625	ENSCAPG00000012212	ZBTB47	99	76.722	Cavia_aperea
ENSRNOG00000019382	Zbtb47	98	71.074	ENSCPOG00000025338	ZBTB47	99	76.171	Cavia_porcellus
ENSRNOG00000019382	Zbtb47	97	67.943	ENSCPBG00000004296	ZBTB47	90	81.250	Chrysemys_picta_bellii
ENSRNOG00000019382	Zbtb47	100	93.141	ENSCGRG00001022459	Zfp651	99	93.141	Cricetulus_griseus_chok1gshd
ENSRNOG00000019382	Zbtb47	100	92.730	ENSCGRG00000005967	Zfp651	100	92.730	Cricetulus_griseus_crigri
ENSRNOG00000019382	Zbtb47	99	59.864	ENSCVAG00000007026	zbtb47b	93	59.219	Cyprinodon_variegatus
ENSRNOG00000019382	Zbtb47	97	49.091	ENSDARG00000057751	zbtb47a	98	77.899	Danio_rerio
ENSRNOG00000019382	Zbtb47	98	61.806	ENSGAFG00000005321	zbtb47b	99	83.577	Gambusia_affinis
ENSRNOG00000019382	Zbtb47	66	62.474	ENSGACG00000003372	zbtb47b	88	82.748	Gasterosteus_aculeatus
ENSRNOG00000019382	Zbtb47	94	80.808	ENSHGLG00100019142	ZBTB47	100	79.242	Heterocephalus_glaber_male
ENSRNOG00000019382	Zbtb47	95	57.722	ENSKMAG00000010330	zbtb47b	81	89.051	Kryptolebias_marmoratus
ENSRNOG00000019382	Zbtb47	55	89.041	ENSLBEG00000019067	zbtb47b	84	89.041	Labrus_bergylta
ENSRNOG00000019382	Zbtb47	93	71.681	ENSLAFG00000003570	ZBTB47	100	71.829	Loxodonta_africana
ENSRNOG00000019382	Zbtb47	98	57.819	ENSMAMG00000001808	zbtb47b	78	88.048	Mastacembelus_armatus
ENSRNOG00000019382	Zbtb47	79	63.495	ENSMGAG00000002353	ZBTB47	87	80.000	Meleagris_gallopavo
ENSRNOG00000019382	Zbtb47	100	89.481	ENSMAUG00000017968	Zfp651	99	91.281	Mesocricetus_auratus
ENSRNOG00000019382	Zbtb47	100	92.455	ENSMOCG00000022719	Zfp651	99	92.044	Microtus_ochrogaster
ENSRNOG00000019382	Zbtb47	92	70.574	ENSMODG00000013582	ZBTB47	98	79.272	Monodelphis_domestica
ENSRNOG00000019382	Zbtb47	100	97.397	MGP_CAROLIEiJ_G0032830	Zfp651	99	97.397	Mus_caroli
ENSRNOG00000019382	Zbtb47	100	97.534	ENSMUSG00000013419	Zfp651	99	97.534	Mus_musculus
ENSRNOG00000019382	Zbtb47	100	97.531	MGP_PahariEiJ_G0015696	Zfp651	99	97.531	Mus_pahari
ENSRNOG00000019382	Zbtb47	100	97.123	MGP_SPRETEiJ_G0033978	Zfp651	99	97.123	Mus_spretus
ENSRNOG00000019382	Zbtb47	66	86.408	ENSMLUG00000001613	ZBTB47	99	71.262	Myotis_lucifugus
ENSRNOG00000019382	Zbtb47	100	88.011	ENSNGAG00000018039	Zfp651	99	89.101	Nannospalax_galili
ENSRNOG00000019382	Zbtb47	91	58.481	ENSNBRG00000018718	zbtb47b	80	85.075	Neolamprologus_brichardi
ENSRNOG00000019382	Zbtb47	74	93.962	ENSOPRG00000016005	ZBTB47	98	73.032	Ochotona_princeps
ENSRNOG00000019382	Zbtb47	83	56.557	ENSONIG00000005797	zbtb47b	73	84.848	Oreochromis_niloticus
ENSRNOG00000019382	Zbtb47	93	67.643	ENSOCUG00000020899	ZBTB47	99	87.896	Oryctolagus_cuniculus
ENSRNOG00000019382	Zbtb47	93	68.142	ENSPSIG00000018010	ZBTB47	98	65.406	Pelodiscus_sinensis
ENSRNOG00000019382	Zbtb47	99	59.189	ENSPMGG00000023652	zbtb47b	94	58.999	Periophthalmus_magnuspinnatus
ENSRNOG00000019382	Zbtb47	100	92.603	ENSPEMG00000006577	Zfp651	99	92.603	Peromyscus_maniculatus_bairdii
ENSRNOG00000019382	Zbtb47	69	69.922	ENSPMAG00000007050	ZBTB47	87	69.922	Petromyzon_marinus
ENSRNOG00000019382	Zbtb47	99	60.758	ENSPFOG00000004330	zbtb47b	50	71.768	Poecilia_formosa
ENSRNOG00000019382	Zbtb47	98	62.083	ENSPLAG00000007917	zbtb47b	99	82.143	Poecilia_latipinna
ENSRNOG00000019382	Zbtb47	98	60.935	ENSPMEG00000005793	zbtb47b	99	81.053	Poecilia_mexicana
ENSRNOG00000019382	Zbtb47	56	87.727	ENSPREG00000020897	zbtb47b	81	87.727	Poecilia_reticulata
ENSRNOG00000019382	Zbtb47	58	84.979	ENSPNYG00000004668	zbtb47b	80	85.590	Pundamilia_nyererei
ENSRNOG00000019382	Zbtb47	72	95.785	ENSSHAG00000007698	ZBTB47	89	86.869	Sarcophilus_harrisii
ENSRNOG00000019382	Zbtb47	98	60.749	ENSSPAG00000011821	zbtb47b	97	58.742	Stegastes_partitus
ENSRNOG00000019382	Zbtb47	93	64.312	ENSTGUG00000000272	ZBTB47	90	77.492	Taeniopygia_guttata
ENSRNOG00000019382	Zbtb47	84	57.556	ENSTNIG00000001401	zbtb47b	79	84.000	Tetraodon_nigroviridis
ENSRNOG00000019382	Zbtb47	76	81.879	ENSTTRG00000009725	ZBTB47	96	84.420	Tursiops_truncatus
ENSRNOG00000019382	Zbtb47	93	60.557	ENSXETG00000006162	zbtb47	99	65.412	Xenopus_tropicalis
ENSRNOG00000019382	Zbtb47	96	59.565	ENSXMAG00000009463	zbtb47b	85	90.521	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process