EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000019670 (Gene tree)
Gene ID: 310720
Gene Symbol: Wdr3
Alias: LOC310720
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 22655 bases
Position: chr2:202447745-202470399
Accession: 1307480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000026726	Utp12	PF04003.12	2.2e-21	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000026726	-	3422	-	ENSRNOP00000026726	942 (aa)	-	D4A106

Gene Model

Click here to download ENSRNOG00000019670's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000019670's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000019670	Wdr3	71	31.387	ENSRNOG00000037295	Poc1a	85	31.387
ENSRNOG00000019670	Wdr3	57	30.435	ENSRNOG00000013429	Tbl3	80	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000019670	Wdr3	100	90.360	ENSG00000065183	WDR3	100	90.360	Homo_sapiens
ENSRNOG00000019670	Wdr3	95	69.016	ENSAPOG00000005975	wdr3	99	69.016	Acanthochromis_polyacanthus
ENSRNOG00000019670	Wdr3	100	90.042	ENSAMEG00000004339	WDR3	100	90.042	Ailuropoda_melanoleuca
ENSRNOG00000019670	Wdr3	99	54.565	ENSACIG00000006993	wdr3	99	58.068	Amphilophus_citrinellus
ENSRNOG00000019670	Wdr3	99	67.371	ENSAOCG00000023966	wdr3	99	69.239	Amphiprion_ocellaris
ENSRNOG00000019670	Wdr3	99	68.220	ENSAPEG00000018223	wdr3	99	68.856	Amphiprion_percula
ENSRNOG00000019670	Wdr3	99	68.644	ENSATEG00000000703	wdr3	99	68.962	Anabas_testudineus
ENSRNOG00000019670	Wdr3	99	72.689	ENSACAG00000008210	WDR3	99	72.689	Anolis_carolinensis
ENSRNOG00000019670	Wdr3	100	90.254	ENSANAG00000033348	WDR3	100	90.254	Aotus_nancymaae
ENSRNOG00000019670	Wdr3	98	69.372	ENSACLG00000016975	wdr3	99	68.538	Astatotilapia_calliptera
ENSRNOG00000019670	Wdr3	100	69.767	ENSAMXG00000005755	wdr3	100	69.133	Astyanax_mexicanus
ENSRNOG00000019670	Wdr3	100	90.254	ENSBTAG00000019937	WDR3	100	90.254	Bos_taurus
ENSRNOG00000019670	Wdr3	99	34.551	WBGene00017435	F13H8.2	98	34.358	Caenorhabditis_elegans
ENSRNOG00000019670	Wdr3	100	89.513	ENSCJAG00000005749	WDR3	100	89.513	Callithrix_jacchus
ENSRNOG00000019670	Wdr3	100	88.983	ENSCAFG00000009916	WDR3	100	88.983	Canis_familiaris
ENSRNOG00000019670	Wdr3	82	89.106	ENSCAFG00020020610	WDR3	98	89.198	Canis_lupus_dingo
ENSRNOG00000019670	Wdr3	100	90.042	ENSCHIG00000010490	WDR3	100	90.042	Capra_hircus
ENSRNOG00000019670	Wdr3	100	89.418	ENSTSYG00000002158	WDR3	100	89.418	Carlito_syrichta
ENSRNOG00000019670	Wdr3	100	71.005	ENSCAPG00000015805	WDR3	100	71.323	Cavia_aperea
ENSRNOG00000019670	Wdr3	100	89.619	ENSCPOG00000011305	WDR3	100	89.619	Cavia_porcellus
ENSRNOG00000019670	Wdr3	100	89.608	ENSCCAG00000037237	WDR3	100	89.608	Cebus_capucinus
ENSRNOG00000019670	Wdr3	100	90.466	ENSCATG00000037200	WDR3	100	90.466	Cercocebus_atys
ENSRNOG00000019670	Wdr3	100	89.725	ENSCLAG00000010657	WDR3	100	89.725	Chinchilla_lanigera
ENSRNOG00000019670	Wdr3	100	90.360	ENSCSAG00000001705	WDR3	100	90.360	Chlorocebus_sabaeus
ENSRNOG00000019670	Wdr3	83	90.000	ENSCHOG00000006428	WDR3	86	90.000	Choloepus_hoffmanni
ENSRNOG00000019670	Wdr3	99	80.361	ENSCPBG00000001426	WDR3	99	80.361	Chrysemys_picta_bellii
ENSRNOG00000019670	Wdr3	100	94.374	ENSCGRG00001019544	Wdr3	100	94.374	Cricetulus_griseus_chok1gshd
ENSRNOG00000019670	Wdr3	99	93.966	ENSCGRG00000001027	Wdr3	91	94.444	Cricetulus_griseus_crigri
ENSRNOG00000019670	Wdr3	99	66.843	ENSCSEG00000009381	wdr3	99	66.949	Cynoglossus_semilaevis
ENSRNOG00000019670	Wdr3	99	64.407	ENSCVAG00000014846	wdr3	99	64.407	Cyprinodon_variegatus
ENSRNOG00000019670	Wdr3	100	69.206	ENSDARG00000011079	wdr3	100	69.312	Danio_rerio
ENSRNOG00000019670	Wdr3	100	88.771	ENSDNOG00000018114	WDR3	100	88.771	Dasypus_novemcinctus
ENSRNOG00000019670	Wdr3	100	89.169	ENSDORG00000011031	Wdr3	100	89.169	Dipodomys_ordii
ENSRNOG00000019670	Wdr3	98	41.684	FBgn0038597	CG8064	98	41.702	Drosophila_melanogaster
ENSRNOG00000019670	Wdr3	100	89.407	ENSEASG00005006393	WDR3	100	89.407	Equus_asinus_asinus
ENSRNOG00000019670	Wdr3	100	89.513	ENSECAG00000006575	WDR3	99	89.513	Equus_caballus
ENSRNOG00000019670	Wdr3	95	88.802	ENSEEUG00000002218	WDR3	100	88.802	Erinaceus_europaeus
ENSRNOG00000019670	Wdr3	100	67.831	ENSELUG00000005997	wdr3	100	67.937	Esox_lucius
ENSRNOG00000019670	Wdr3	100	89.831	ENSFCAG00000003469	WDR3	100	89.831	Felis_catus
ENSRNOG00000019670	Wdr3	99	75.928	ENSFALG00000005089	WDR3	99	75.928	Ficedula_albicollis
ENSRNOG00000019670	Wdr3	100	89.936	ENSFDAG00000016284	WDR3	100	89.936	Fukomys_damarensis
ENSRNOG00000019670	Wdr3	99	67.161	ENSFHEG00000012138	wdr3	99	63.886	Fundulus_heteroclitus
ENSRNOG00000019670	Wdr3	93	62.825	ENSGMOG00000002962	wdr3	100	62.942	Gadus_morhua
ENSRNOG00000019670	Wdr3	100	76.882	ENSGALG00000014791	WDR3	99	77.495	Gallus_gallus
ENSRNOG00000019670	Wdr3	99	68.220	ENSGAFG00000013102	wdr3	99	68.220	Gambusia_affinis
ENSRNOG00000019670	Wdr3	93	63.536	ENSGACG00000008251	wdr3	100	63.653	Gasterosteus_aculeatus
ENSRNOG00000019670	Wdr3	95	80.920	ENSGAGG00000009171	WDR3	96	81.145	Gopherus_agassizii
ENSRNOG00000019670	Wdr3	100	90.572	ENSGGOG00000009982	WDR3	100	90.572	Gorilla_gorilla
ENSRNOG00000019670	Wdr3	98	69.481	ENSHBUG00000004367	wdr3	99	68.644	Haplochromis_burtoni
ENSRNOG00000019670	Wdr3	100	89.831	ENSHGLG00000017936	WDR3	100	89.831	Heterocephalus_glaber_female
ENSRNOG00000019670	Wdr3	100	89.831	ENSHGLG00100008292	WDR3	100	89.831	Heterocephalus_glaber_male
ENSRNOG00000019670	Wdr3	100	61.570	ENSHCOG00000017501	wdr3	97	67.136	Hippocampus_comes
ENSRNOG00000019670	Wdr3	100	68.148	ENSIPUG00000003396	wdr3	100	68.148	Ictalurus_punctatus
ENSRNOG00000019670	Wdr3	100	90.042	ENSSTOG00000003504	WDR3	100	90.042	Ictidomys_tridecemlineatus
ENSRNOG00000019670	Wdr3	100	87.937	ENSJJAG00000013861	Wdr3	100	87.937	Jaculus_jaculus
ENSRNOG00000019670	Wdr3	98	67.568	ENSKMAG00000016004	wdr3	99	68.603	Kryptolebias_marmoratus
ENSRNOG00000019670	Wdr3	99	64.588	ENSLBEG00000013757	wdr3	99	64.588	Labrus_bergylta
ENSRNOG00000019670	Wdr3	98	66.523	ENSLACG00000014259	WDR3	99	66.350	Latimeria_chalumnae
ENSRNOG00000019670	Wdr3	98	67.996	ENSLOCG00000011052	wdr3	99	67.722	Lepisosteus_oculatus
ENSRNOG00000019670	Wdr3	100	87.712	ENSLAFG00000012108	WDR3	100	87.712	Loxodonta_africana
ENSRNOG00000019670	Wdr3	100	90.360	ENSMFAG00000034570	WDR3	100	90.360	Macaca_fascicularis
ENSRNOG00000019670	Wdr3	100	90.360	ENSMMUG00000008513	WDR3	100	90.360	Macaca_mulatta
ENSRNOG00000019670	Wdr3	100	90.360	ENSMNEG00000039555	WDR3	100	90.360	Macaca_nemestrina
ENSRNOG00000019670	Wdr3	100	90.360	ENSMLEG00000035516	WDR3	100	90.360	Mandrillus_leucophaeus
ENSRNOG00000019670	Wdr3	99	65.960	ENSMAMG00000020737	wdr3	99	66.066	Mastacembelus_armatus
ENSRNOG00000019670	Wdr3	98	65.152	ENSMZEG00005019253	wdr3	99	65.089	Maylandia_zebra
ENSRNOG00000019670	Wdr3	99	74.586	ENSMGAG00000014241	WDR3	99	75.414	Meleagris_gallopavo
ENSRNOG00000019670	Wdr3	100	95.223	ENSMAUG00000002574	Wdr3	100	95.223	Mesocricetus_auratus
ENSRNOG00000019670	Wdr3	100	88.983	ENSMICG00000001783	WDR3	100	88.983	Microcebus_murinus
ENSRNOG00000019670	Wdr3	100	93.100	ENSMOCG00000014361	Wdr3	100	93.100	Microtus_ochrogaster
ENSRNOG00000019670	Wdr3	99	65.016	ENSMMOG00000019419	wdr3	99	65.332	Mola_mola
ENSRNOG00000019670	Wdr3	99	83.563	ENSMODG00000005243	WDR3	100	83.475	Monodelphis_domestica
ENSRNOG00000019670	Wdr3	99	61.294	ENSMALG00000016265	wdr3	99	60.976	Monopterus_albus
ENSRNOG00000019670	Wdr3	100	95.966	MGP_CAROLIEiJ_G0025421	Wdr3	100	95.966	Mus_caroli
ENSRNOG00000019670	Wdr3	100	96.072	ENSMUSG00000033285	Wdr3	100	96.072	Mus_musculus
ENSRNOG00000019670	Wdr3	100	96.603	MGP_PahariEiJ_G0026865	Wdr3	100	96.603	Mus_pahari
ENSRNOG00000019670	Wdr3	100	96.391	MGP_SPRETEiJ_G0026371	Wdr3	100	96.391	Mus_spretus
ENSRNOG00000019670	Wdr3	100	89.936	ENSMPUG00000001565	WDR3	100	89.936	Mustela_putorius_furo
ENSRNOG00000019670	Wdr3	100	89.619	ENSMLUG00000003500	WDR3	100	89.619	Myotis_lucifugus
ENSRNOG00000019670	Wdr3	100	91.083	ENSNGAG00000021117	Wdr3	100	91.083	Nannospalax_galili
ENSRNOG00000019670	Wdr3	98	61.200	ENSNBRG00000015140	wdr3	99	61.199	Neolamprologus_brichardi
ENSRNOG00000019670	Wdr3	100	90.042	ENSNLEG00000005304	WDR3	100	90.042	Nomascus_leucogenys
ENSRNOG00000019670	Wdr3	95	94.737	ENSMEUG00000009673	WDR3	81	94.737	Notamacropus_eugenii
ENSRNOG00000019670	Wdr3	100	80.741	ENSOPRG00000001857	WDR3	94	87.338	Ochotona_princeps
ENSRNOG00000019670	Wdr3	93	88.444	ENSODEG00000000136	WDR3	100	88.444	Octodon_degus
ENSRNOG00000019670	Wdr3	98	68.615	ENSONIG00000015678	wdr3	99	68.008	Oreochromis_niloticus
ENSRNOG00000019670	Wdr3	100	75.292	ENSOANG00000003070	WDR3	100	75.292	Ornithorhynchus_anatinus
ENSRNOG00000019670	Wdr3	100	89.831	ENSOCUG00000007572	WDR3	100	89.831	Oryctolagus_cuniculus
ENSRNOG00000019670	Wdr3	99	67.055	ENSORLG00020022391	wdr3	99	67.336	Oryzias_latipes_hni
ENSRNOG00000019670	Wdr3	99	66.737	ENSORLG00015023208	wdr3	99	67.019	Oryzias_latipes_hsok
ENSRNOG00000019670	Wdr3	99	66.843	ENSOMEG00000017592	wdr3	99	66.843	Oryzias_melastigma
ENSRNOG00000019670	Wdr3	100	89.619	ENSOGAG00000007399	WDR3	100	89.619	Otolemur_garnettii
ENSRNOG00000019670	Wdr3	100	89.641	ENSOARG00000020325	WDR3	100	89.641	Ovis_aries
ENSRNOG00000019670	Wdr3	100	90.466	ENSPPAG00000029068	WDR3	100	90.466	Pan_paniscus
ENSRNOG00000019670	Wdr3	100	89.936	ENSPPRG00000022972	WDR3	100	89.936	Panthera_pardus
ENSRNOG00000019670	Wdr3	100	89.725	ENSPTIG00000016747	WDR3	100	89.725	Panthera_tigris_altaica
ENSRNOG00000019670	Wdr3	100	90.466	ENSPTRG00000001168	WDR3	100	90.466	Pan_troglodytes
ENSRNOG00000019670	Wdr3	100	90.466	ENSPANG00000020680	WDR3	100	90.466	Papio_anubis
ENSRNOG00000019670	Wdr3	99	69.492	ENSPKIG00000024900	wdr3	99	69.597	Paramormyrops_kingsleyae
ENSRNOG00000019670	Wdr3	99	80.659	ENSPSIG00000017455	WDR3	99	80.659	Pelodiscus_sinensis
ENSRNOG00000019670	Wdr3	98	65.152	ENSPMGG00000022686	wdr3	99	65.043	Periophthalmus_magnuspinnatus
ENSRNOG00000019670	Wdr3	100	95.329	ENSPEMG00000011928	Wdr3	100	95.329	Peromyscus_maniculatus_bairdii
ENSRNOG00000019670	Wdr3	95	84.546	ENSPCIG00000000938	WDR3	99	84.000	Phascolarctos_cinereus
ENSRNOG00000019670	Wdr3	99	67.725	ENSPFOG00000017900	wdr3	99	67.725	Poecilia_formosa
ENSRNOG00000019670	Wdr3	99	68.008	ENSPLAG00000014362	wdr3	99	68.008	Poecilia_latipinna
ENSRNOG00000019670	Wdr3	100	90.244	ENSPPYG00000000970	WDR3	100	90.244	Pongo_abelii
ENSRNOG00000019670	Wdr3	92	74.078	ENSPCAG00000001265	WDR3	100	74.078	Procavia_capensis
ENSRNOG00000019670	Wdr3	98	66.234	ENSPNYG00000006217	wdr3	99	65.148	Pundamilia_nyererei
ENSRNOG00000019670	Wdr3	100	69.767	ENSPNAG00000006843	wdr3	100	69.767	Pygocentrus_nattereri
ENSRNOG00000019670	Wdr3	99	89.615	ENSRBIG00000039149	WDR3	98	88.578	Rhinopithecus_bieti
ENSRNOG00000019670	Wdr3	100	90.042	ENSRROG00000028066	WDR3	100	90.042	Rhinopithecus_roxellana
ENSRNOG00000019670	Wdr3	99	36.114	YLR129W	DIP2	98	36.289	Saccharomyces_cerevisiae
ENSRNOG00000019670	Wdr3	100	90.042	ENSSBOG00000015569	WDR3	100	90.042	Saimiri_boliviensis_boliviensis
ENSRNOG00000019670	Wdr3	100	83.983	ENSSHAG00000005169	WDR3	100	83.983	Sarcophilus_harrisii
ENSRNOG00000019670	Wdr3	99	67.970	ENSSFOG00015000595	wdr3	99	67.970	Scleropages_formosus
ENSRNOG00000019670	Wdr3	99	66.420	ENSSMAG00000008334	wdr3	98	67.312	Scophthalmus_maximus
ENSRNOG00000019670	Wdr3	99	68.432	ENSSDUG00000014276	wdr3	99	68.538	Seriola_dumerili
ENSRNOG00000019670	Wdr3	99	67.691	ENSSLDG00000012837	wdr3	99	67.903	Seriola_lalandi_dorsalis
ENSRNOG00000019670	Wdr3	94	80.271	ENSSARG00000002347	WDR3	100	79.594	Sorex_araneus
ENSRNOG00000019670	Wdr3	99	71.050	ENSSPUG00000005582	WDR3	99	70.838	Sphenodon_punctatus
ENSRNOG00000019670	Wdr3	100	89.407	ENSSSCG00000006727	WDR3	100	89.407	Sus_scrofa
ENSRNOG00000019670	Wdr3	98	76.381	ENSTGUG00000013357	WDR3	99	75.928	Taeniopygia_guttata
ENSRNOG00000019670	Wdr3	99	66.667	ENSTRUG00000002727	wdr3	99	67.196	Takifugu_rubripes
ENSRNOG00000019670	Wdr3	98	66.775	ENSTNIG00000005299	wdr3	98	66.524	Tetraodon_nigroviridis
ENSRNOG00000019670	Wdr3	83	95.276	ENSTBEG00000002549	WDR3	74	95.276	Tupaia_belangeri
ENSRNOG00000019670	Wdr3	100	81.038	ENSTTRG00000003817	WDR3	100	81.038	Tursiops_truncatus
ENSRNOG00000019670	Wdr3	100	85.169	ENSUAMG00000023139	WDR3	100	85.169	Ursus_americanus
ENSRNOG00000019670	Wdr3	90	88.304	ENSVPAG00000000073	WDR3	89	88.304	Vicugna_pacos
ENSRNOG00000019670	Wdr3	100	89.407	ENSVVUG00000010629	WDR3	100	89.407	Vulpes_vulpes
ENSRNOG00000019670	Wdr3	98	71.845	ENSXETG00000009920	wdr3	99	71.624	Xenopus_tropicalis
ENSRNOG00000019670	Wdr3	99	68.008	ENSXMAG00000009827	wdr3	99	68.008	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0031965	nuclear membrane	-	IEA	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component