EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000019712 (Gene tree)
Gene ID: 298688
Gene Symbol: Ints11
Alias: Cpsf3l|LOC298688|MGC124975|RGD1306841|int11
Full Name: integrator complex subunit 11
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 18452 bases
Position: chr5:173318479-173336930
Accession: 1306841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000026725	Beta-Casp	PF10996.8	6.2e-26	1	1
ENSRNOP00000026725	Lactamase_B	PF00753.27	9.8e-11	1	1
ENSRNOP00000026725	RMMBL	PF07521.12	6.1e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000026725	-	1982	XM_006239549	ENSRNOP00000026725	600 (aa)	XP_006239611	Q3MHC2

Gene Model

Click here to download ENSRNOG00000019712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000019712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000019712	Ints11	82	37.945	ENSRNOG00000052418	Cpsf3	71	37.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000019712	Ints11	100	97.000	ENSG00000127054	INTS11	100	100.000	Homo_sapiens
ENSRNOG00000019712	Ints11	99	83.806	ENSAPOG00000022656	ints11	99	83.806	Acanthochromis_polyacanthus
ENSRNOG00000019712	Ints11	100	96.500	ENSAMEG00000013755	INTS11	100	96.500	Ailuropoda_melanoleuca
ENSRNOG00000019712	Ints11	99	83.806	ENSACIG00000016715	ints11	99	83.806	Amphilophus_citrinellus
ENSRNOG00000019712	Ints11	99	83.973	ENSAOCG00000021172	ints11	99	83.973	Amphiprion_ocellaris
ENSRNOG00000019712	Ints11	99	83.973	ENSAPEG00000024732	ints11	99	83.973	Amphiprion_percula
ENSRNOG00000019712	Ints11	99	83.472	ENSATEG00000024376	ints11	99	83.472	Anabas_testudineus
ENSRNOG00000019712	Ints11	100	91.542	ENSAPLG00000005238	INTS11	100	91.542	Anas_platyrhynchos
ENSRNOG00000019712	Ints11	99	88.107	ENSACAG00000013975	INTS11	99	88.107	Anolis_carolinensis
ENSRNOG00000019712	Ints11	100	97.333	ENSANAG00000034133	INTS11	100	97.333	Aotus_nancymaae
ENSRNOG00000019712	Ints11	98	83.163	ENSACLG00000018782	ints11	99	83.158	Astatotilapia_calliptera
ENSRNOG00000019712	Ints11	99	84.641	ENSAMXG00000038758	ints11	99	84.641	Astyanax_mexicanus
ENSRNOG00000019712	Ints11	99	95.652	ENSBTAG00000007620	INTS11	99	95.652	Bos_taurus
ENSRNOG00000019712	Ints11	92	60.428	WBGene00008642	F10B5.8	91	60.428	Caenorhabditis_elegans
ENSRNOG00000019712	Ints11	100	97.000	ENSCJAG00000011144	INTS11	100	97.000	Callithrix_jacchus
ENSRNOG00000019712	Ints11	100	96.167	ENSCAFG00000019287	INTS11	100	96.167	Canis_familiaris
ENSRNOG00000019712	Ints11	100	96.167	ENSCAFG00020011566	INTS11	100	96.167	Canis_lupus_dingo
ENSRNOG00000019712	Ints11	99	95.819	ENSCHIG00000023117	INTS11	99	95.819	Capra_hircus
ENSRNOG00000019712	Ints11	99	93.243	ENSTSYG00000012018	INTS11	99	92.481	Carlito_syrichta
ENSRNOG00000019712	Ints11	84	96.047	ENSCAPG00000012788	INTS11	93	96.047	Cavia_aperea
ENSRNOG00000019712	Ints11	100	97.667	ENSCPOG00000005152	INTS11	100	97.667	Cavia_porcellus
ENSRNOG00000019712	Ints11	100	97.000	ENSCCAG00000026348	INTS11	100	97.000	Cebus_capucinus
ENSRNOG00000019712	Ints11	100	97.333	ENSCATG00000005882	INTS11	100	97.333	Cercocebus_atys
ENSRNOG00000019712	Ints11	100	98.167	ENSCLAG00000004586	INTS11	100	98.167	Chinchilla_lanigera
ENSRNOG00000019712	Ints11	100	97.167	ENSCSAG00000000681	INTS11	100	97.167	Chlorocebus_sabaeus
ENSRNOG00000019712	Ints11	88	95.902	ENSCPBG00000022634	INTS11	100	95.902	Chrysemys_picta_bellii
ENSRNOG00000019712	Ints11	99	67.720	ENSCING00000002398	-	99	67.720	Ciona_intestinalis
ENSRNOG00000019712	Ints11	99	68.781	ENSCSAVG00000007312	-	99	68.781	Ciona_savignyi
ENSRNOG00000019712	Ints11	100	97.333	ENSCANG00000034418	INTS11	100	97.333	Colobus_angolensis_palliatus
ENSRNOG00000019712	Ints11	100	99.333	ENSCGRG00001013448	Ints11	100	99.333	Cricetulus_griseus_chok1gshd
ENSRNOG00000019712	Ints11	100	99.333	ENSCGRG00000006961	Ints11	100	99.333	Cricetulus_griseus_crigri
ENSRNOG00000019712	Ints11	99	83.639	ENSCSEG00000017374	ints11	99	83.639	Cynoglossus_semilaevis
ENSRNOG00000019712	Ints11	99	80.067	ENSCVAG00000008788	ints11	99	80.067	Cyprinodon_variegatus
ENSRNOG00000019712	Ints11	99	84.255	ENSDARG00000025212	ints11	100	91.441	Danio_rerio
ENSRNOG00000019712	Ints11	99	89.149	ENSDNOG00000025863	INTS11	84	97.222	Dasypus_novemcinctus
ENSRNOG00000019712	Ints11	98	97.288	ENSDORG00000002045	Ints11	100	97.288	Dipodomys_ordii
ENSRNOG00000019712	Ints11	99	68.908	FBgn0039691	IntS11	99	68.908	Drosophila_melanogaster
ENSRNOG00000019712	Ints11	83	88.176	ENSETEG00000002094	INTS11	100	88.176	Echinops_telfairi
ENSRNOG00000019712	Ints11	99	81.040	ENSEBUG00000003190	-	100	81.040	Eptatretus_burgeri
ENSRNOG00000019712	Ints11	100	96.167	ENSEASG00005014989	INTS11	77	94.903	Equus_asinus_asinus
ENSRNOG00000019712	Ints11	100	96.333	ENSECAG00000023292	INTS11	71	96.333	Equus_caballus
ENSRNOG00000019712	Ints11	100	96.500	ENSEEUG00000000838	INTS11	100	96.500	Erinaceus_europaeus
ENSRNOG00000019712	Ints11	100	83.694	ENSELUG00000004815	ints11	99	83.694	Esox_lucius
ENSRNOG00000019712	Ints11	100	96.500	ENSFCAG00000007618	INTS11	100	96.500	Felis_catus
ENSRNOG00000019712	Ints11	99	89.130	ENSFALG00000009231	INTS11	99	89.130	Ficedula_albicollis
ENSRNOG00000019712	Ints11	100	97.833	ENSFDAG00000009131	INTS11	100	97.833	Fukomys_damarensis
ENSRNOG00000019712	Ints11	99	84.590	ENSFHEG00000007863	ints11	99	84.590	Fundulus_heteroclitus
ENSRNOG00000019712	Ints11	99	83.167	ENSGMOG00000006721	ints11	99	83.167	Gadus_morhua
ENSRNOG00000019712	Ints11	100	91.667	ENSGALG00000001691	INTS11	100	91.667	Gallus_gallus
ENSRNOG00000019712	Ints11	99	77.025	ENSGAFG00000019948	ints11	99	77.025	Gambusia_affinis
ENSRNOG00000019712	Ints11	99	83.639	ENSGACG00000011260	ints11	99	83.639	Gasterosteus_aculeatus
ENSRNOG00000019712	Ints11	100	90.667	ENSGAGG00000015874	INTS11	100	90.667	Gopherus_agassizii
ENSRNOG00000019712	Ints11	100	97.333	ENSGGOG00000005366	INTS11	100	97.333	Gorilla_gorilla
ENSRNOG00000019712	Ints11	99	83.639	ENSHBUG00000006820	ints11	99	83.639	Haplochromis_burtoni
ENSRNOG00000019712	Ints11	99	97.635	ENSHGLG00000017561	INTS11	98	97.635	Heterocephalus_glaber_female
ENSRNOG00000019712	Ints11	99	97.635	ENSHGLG00100014276	INTS11	98	97.635	Heterocephalus_glaber_male
ENSRNOG00000019712	Ints11	99	82.805	ENSHCOG00000013135	ints11	99	82.805	Hippocampus_comes
ENSRNOG00000019712	Ints11	99	83.306	ENSIPUG00000022761	cpsf3l	99	83.306	Ictalurus_punctatus
ENSRNOG00000019712	Ints11	99	97.333	ENSSTOG00000020019	INTS11	99	97.333	Ictidomys_tridecemlineatus
ENSRNOG00000019712	Ints11	100	94.500	ENSJJAG00000008717	Ints11	100	94.500	Jaculus_jaculus
ENSRNOG00000019712	Ints11	99	83.082	ENSKMAG00000003315	ints11	99	83.082	Kryptolebias_marmoratus
ENSRNOG00000019712	Ints11	98	82.653	ENSLBEG00000011392	ints11	99	82.653	Labrus_bergylta
ENSRNOG00000019712	Ints11	99	71.476	ENSLACG00000018802	INTS11	99	71.476	Latimeria_chalumnae
ENSRNOG00000019712	Ints11	99	79.500	ENSLOCG00000002177	ints11	99	79.500	Lepisosteus_oculatus
ENSRNOG00000019712	Ints11	99	95.431	ENSLAFG00000013687	INTS11	100	94.825	Loxodonta_africana
ENSRNOG00000019712	Ints11	100	97.167	ENSMFAG00000044583	INTS11	100	97.167	Macaca_fascicularis
ENSRNOG00000019712	Ints11	99	97.124	ENSMMUG00000013866	INTS11	100	97.373	Macaca_mulatta
ENSRNOG00000019712	Ints11	100	97.500	ENSMNEG00000030021	INTS11	100	97.500	Macaca_nemestrina
ENSRNOG00000019712	Ints11	89	97.917	ENSMLEG00000044372	INTS11	100	97.917	Mandrillus_leucophaeus
ENSRNOG00000019712	Ints11	99	83.806	ENSMAMG00000004522	ints11	99	83.806	Mastacembelus_armatus
ENSRNOG00000019712	Ints11	99	83.472	ENSMZEG00005023352	ints11	99	83.472	Maylandia_zebra
ENSRNOG00000019712	Ints11	100	91.667	ENSMGAG00000002879	INTS11	100	91.667	Meleagris_gallopavo
ENSRNOG00000019712	Ints11	100	99.167	ENSMAUG00000010199	Ints11	100	99.167	Mesocricetus_auratus
ENSRNOG00000019712	Ints11	100	96.667	ENSMICG00000014186	INTS11	100	97.656	Microcebus_murinus
ENSRNOG00000019712	Ints11	100	99.500	ENSMOCG00000021304	Ints11	100	99.500	Microtus_ochrogaster
ENSRNOG00000019712	Ints11	99	75.209	ENSMMOG00000015040	ints11	99	75.209	Mola_mola
ENSRNOG00000019712	Ints11	100	94.167	ENSMODG00000006290	INTS11	100	94.167	Monodelphis_domestica
ENSRNOG00000019712	Ints11	99	83.806	ENSMALG00000002210	ints11	99	83.806	Monopterus_albus
ENSRNOG00000019712	Ints11	100	99.667	MGP_CAROLIEiJ_G0026910	Ints11	100	99.667	Mus_caroli
ENSRNOG00000019712	Ints11	100	99.667	ENSMUSG00000029034	Ints11	100	99.667	Mus_musculus
ENSRNOG00000019712	Ints11	100	99.667	MGP_PahariEiJ_G0029259	Ints11	100	99.667	Mus_pahari
ENSRNOG00000019712	Ints11	100	99.333	MGP_SPRETEiJ_G0027905	Ints11	100	99.333	Mus_spretus
ENSRNOG00000019712	Ints11	95	96.322	ENSMPUG00000014311	INTS11	100	96.322	Mustela_putorius_furo
ENSRNOG00000019712	Ints11	100	98.667	ENSNGAG00000010139	Ints11	100	98.667	Nannospalax_galili
ENSRNOG00000019712	Ints11	99	77.295	ENSNBRG00000002564	ints11	99	77.295	Neolamprologus_brichardi
ENSRNOG00000019712	Ints11	88	91.917	ENSNLEG00000000053	INTS11	100	95.238	Nomascus_leucogenys
ENSRNOG00000019712	Ints11	98	88.533	ENSMEUG00000011664	INTS11	100	88.533	Notamacropus_eugenii
ENSRNOG00000019712	Ints11	54	98.540	ENSOPRG00000001794	-	83	98.540	Ochotona_princeps
ENSRNOG00000019712	Ints11	100	97.000	ENSODEG00000009761	INTS11	100	97.000	Octodon_degus
ENSRNOG00000019712	Ints11	99	83.639	ENSONIG00000016600	ints11	99	83.639	Oreochromis_niloticus
ENSRNOG00000019712	Ints11	81	62.753	ENSOANG00000013023	-	99	61.771	Ornithorhynchus_anatinus
ENSRNOG00000019712	Ints11	99	83.110	ENSORLG00000015957	ints11	99	83.110	Oryzias_latipes
ENSRNOG00000019712	Ints11	99	83.110	ENSORLG00020008544	ints11	99	83.110	Oryzias_latipes_hni
ENSRNOG00000019712	Ints11	99	83.110	ENSORLG00015003381	ints11	99	83.110	Oryzias_latipes_hsok
ENSRNOG00000019712	Ints11	99	82.968	ENSOMEG00000018159	ints11	99	82.968	Oryzias_melastigma
ENSRNOG00000019712	Ints11	100	96.173	ENSOGAG00000000463	INTS11	100	96.173	Otolemur_garnettii
ENSRNOG00000019712	Ints11	90	92.254	ENSOARG00000004725	INTS11	97	92.254	Ovis_aries
ENSRNOG00000019712	Ints11	100	97.167	ENSPPAG00000037865	INTS11	100	97.167	Pan_paniscus
ENSRNOG00000019712	Ints11	100	96.500	ENSPPRG00000021402	INTS11	100	96.500	Panthera_pardus
ENSRNOG00000019712	Ints11	99	96.447	ENSPTIG00000019834	INTS11	100	96.497	Panthera_tigris_altaica
ENSRNOG00000019712	Ints11	100	97.167	ENSPTRG00000051102	INTS11	100	97.167	Pan_troglodytes
ENSRNOG00000019712	Ints11	100	97.333	ENSPANG00000019349	INTS11	100	97.333	Papio_anubis
ENSRNOG00000019712	Ints11	99	85.142	ENSPKIG00000008091	ints11	99	85.142	Paramormyrops_kingsleyae
ENSRNOG00000019712	Ints11	99	91.275	ENSPSIG00000002824	INTS11	99	91.275	Pelodiscus_sinensis
ENSRNOG00000019712	Ints11	97	84.655	ENSPMGG00000006430	ints11	96	84.655	Periophthalmus_magnuspinnatus
ENSRNOG00000019712	Ints11	100	99.167	ENSPEMG00000018526	Ints11	100	99.167	Peromyscus_maniculatus_bairdii
ENSRNOG00000019712	Ints11	100	93.833	ENSPCIG00000007815	-	100	93.833	Phascolarctos_cinereus
ENSRNOG00000019712	Ints11	66	79.048	ENSPCIG00000023187	-	100	79.048	Phascolarctos_cinereus
ENSRNOG00000019712	Ints11	99	83.779	ENSPFOG00000008512	ints11	99	83.779	Poecilia_formosa
ENSRNOG00000019712	Ints11	99	83.920	ENSPLAG00000019195	ints11	99	83.920	Poecilia_latipinna
ENSRNOG00000019712	Ints11	99	83.752	ENSPMEG00000018956	ints11	99	83.752	Poecilia_mexicana
ENSRNOG00000019712	Ints11	99	83.920	ENSPREG00000021516	ints11	99	83.920	Poecilia_reticulata
ENSRNOG00000019712	Ints11	98	92.542	ENSPPYG00000002013	INTS11	100	92.542	Pongo_abelii
ENSRNOG00000019712	Ints11	69	97.778	ENSPCAG00000002309	INTS11	69	97.778	Procavia_capensis
ENSRNOG00000019712	Ints11	100	96.667	ENSPCOG00000016861	INTS11	100	97.656	Propithecus_coquereli
ENSRNOG00000019712	Ints11	100	96.333	ENSPVAG00000001017	INTS11	99	96.333	Pteropus_vampyrus
ENSRNOG00000019712	Ints11	99	83.639	ENSPNYG00000021238	ints11	99	83.639	Pundamilia_nyererei
ENSRNOG00000019712	Ints11	99	84.641	ENSPNAG00000022204	ints11	99	84.641	Pygocentrus_nattereri
ENSRNOG00000019712	Ints11	100	96.833	ENSRBIG00000039487	INTS11	100	96.833	Rhinopithecus_bieti
ENSRNOG00000019712	Ints11	57	94.152	ENSRROG00000039631	INTS11	100	94.152	Rhinopithecus_roxellana
ENSRNOG00000019712	Ints11	100	96.833	ENSSBOG00000018848	INTS11	100	96.833	Saimiri_boliviensis_boliviensis
ENSRNOG00000019712	Ints11	99	84.615	ENSSFOG00015020610	cpsf3l	99	84.615	Scleropages_formosus
ENSRNOG00000019712	Ints11	99	83.472	ENSSMAG00000019579	ints11	99	83.472	Scophthalmus_maximus
ENSRNOG00000019712	Ints11	99	83.639	ENSSDUG00000003980	ints11	99	83.639	Seriola_dumerili
ENSRNOG00000019712	Ints11	99	83.639	ENSSLDG00000017198	ints11	99	83.639	Seriola_lalandi_dorsalis
ENSRNOG00000019712	Ints11	100	89.833	ENSSPUG00000016767	INTS11	100	92.857	Sphenodon_punctatus
ENSRNOG00000019712	Ints11	99	83.639	ENSSPAG00000018290	ints11	99	83.639	Stegastes_partitus
ENSRNOG00000019712	Ints11	99	94.992	ENSSSCG00000003339	INTS11	100	94.992	Sus_scrofa
ENSRNOG00000019712	Ints11	98	91.327	ENSTGUG00000003192	-	99	91.327	Taeniopygia_guttata
ENSRNOG00000019712	Ints11	99	84.757	ENSTRUG00000005523	ints11	99	84.757	Takifugu_rubripes
ENSRNOG00000019712	Ints11	99	83.752	ENSTNIG00000012415	ints11	99	83.752	Tetraodon_nigroviridis
ENSRNOG00000019712	Ints11	89	97.373	ENSTBEG00000005377	INTS11	100	97.373	Tupaia_belangeri
ENSRNOG00000019712	Ints11	99	82.441	ENSTTRG00000017031	INTS11	99	82.441	Tursiops_truncatus
ENSRNOG00000019712	Ints11	100	96.500	ENSUAMG00000012804	INTS11	100	96.500	Ursus_americanus
ENSRNOG00000019712	Ints11	99	96.447	ENSUMAG00000002070	INTS11	98	96.447	Ursus_maritimus
ENSRNOG00000019712	Ints11	59	93.333	ENSVPAG00000005134	-	76	93.333	Vicugna_pacos
ENSRNOG00000019712	Ints11	100	96.500	ENSVVUG00000004350	INTS11	100	96.500	Vulpes_vulpes
ENSRNOG00000019712	Ints11	100	89.333	ENSXETG00000030716	INTS11	100	89.333	Xenopus_tropicalis
ENSRNOG00000019712	Ints11	99	78.559	ENSXCOG00000015382	ints11	99	78.559	Xiphophorus_couchianus
ENSRNOG00000019712	Ints11	99	83.920	ENSXMAG00000012456	ints11	99	83.920	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0016180	snRNA processing	21873635.	IBA	Process
GO:0016180	snRNA processing	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0032039	integrator complex	-	IEA	Component
GO:0032039	integrator complex	-	ISO	Component