EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020304 (Gene tree)
Gene ID: 309458
Gene Symbol: Pdcd11
Alias: LOC309458
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 41112 bases
Position: chr1:266866931-266908042
Accession: 1304933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000027512	Suf	PF05843.14	1.9e-09	1	1
ENSRNOP00000027512	S1	PF00575.23	9.9e-68	1	4
ENSRNOP00000027512	S1	PF00575.23	9.9e-68	2	4
ENSRNOP00000027512	S1	PF00575.23	9.9e-68	3	4
ENSRNOP00000027512	S1	PF00575.23	9.9e-68	4	4

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000027512	-	6788	-	ENSRNOP00000027512	1876 (aa)	-	D3ZNI3

Gene Model

Click here to download ENSRNOG00000020304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020304	Pdcd11	99	81.023	ENSG00000148843	PDCD11	100	80.970	Homo_sapiens
ENSRNOG00000020304	Pdcd11	99	43.618	ENSAPOG00000015629	pdcd11	99	43.446	Acanthochromis_polyacanthus
ENSRNOG00000020304	Pdcd11	99	78.279	ENSAMEG00000017935	PDCD11	99	78.332	Ailuropoda_melanoleuca
ENSRNOG00000020304	Pdcd11	99	43.228	ENSAOCG00000015287	pdcd11	99	43.379	Amphiprion_ocellaris
ENSRNOG00000020304	Pdcd11	53	42.871	ENSAPEG00000020240	pdcd11	96	42.900	Amphiprion_percula
ENSRNOG00000020304	Pdcd11	99	43.250	ENSATEG00000021043	pdcd11	99	43.545	Anabas_testudineus
ENSRNOG00000020304	Pdcd11	99	54.541	ENSAPLG00000010301	PDCD11	99	54.545	Anas_platyrhynchos
ENSRNOG00000020304	Pdcd11	99	53.425	ENSACAG00000004796	PDCD11	99	53.372	Anolis_carolinensis
ENSRNOG00000020304	Pdcd11	99	80.619	ENSANAG00000034576	PDCD11	99	80.246	Aotus_nancymaae
ENSRNOG00000020304	Pdcd11	95	65.942	ENSACLG00000018236	pdcd11	97	60.472	Astatotilapia_calliptera
ENSRNOG00000020304	Pdcd11	99	40.108	ENSAMXG00000005458	pdcd11	100	40.018	Astyanax_mexicanus
ENSRNOG00000020304	Pdcd11	99	76.674	ENSBTAG00000009715	PDCD11	100	76.355	Bos_taurus
ENSRNOG00000020304	Pdcd11	99	79.808	ENSCJAG00000018257	PDCD11	99	80.021	Callithrix_jacchus
ENSRNOG00000020304	Pdcd11	99	78.583	ENSCAFG00000010411	PDCD11	100	78.689	Canis_familiaris
ENSRNOG00000020304	Pdcd11	99	78.644	ENSCAFG00020010369	PDCD11	100	78.590	Canis_lupus_dingo
ENSRNOG00000020304	Pdcd11	99	76.396	ENSCHIG00000025218	PDCD11	100	76.183	Capra_hircus
ENSRNOG00000020304	Pdcd11	98	73.246	ENSTSYG00000033423	PDCD11	99	73.246	Carlito_syrichta
ENSRNOG00000020304	Pdcd11	91	68.235	ENSCAPG00000005386	PDCD11	99	68.235	Cavia_aperea
ENSRNOG00000020304	Pdcd11	99	77.263	ENSCPOG00000010957	PDCD11	99	78.395	Cavia_porcellus
ENSRNOG00000020304	Pdcd11	99	80.449	ENSCCAG00000018950	PDCD11	99	80.395	Cebus_capucinus
ENSRNOG00000020304	Pdcd11	99	81.363	ENSCATG00000044331	PDCD11	100	80.968	Cercocebus_atys
ENSRNOG00000020304	Pdcd11	99	77.323	ENSCLAG00000001029	PDCD11	100	76.935	Chinchilla_lanigera
ENSRNOG00000020304	Pdcd11	99	81.237	ENSCSAG00000005346	PDCD11	100	80.841	Chlorocebus_sabaeus
ENSRNOG00000020304	Pdcd11	83	95.349	ENSCHOG00000004796	PDCD11	89	95.349	Choloepus_hoffmanni
ENSRNOG00000020304	Pdcd11	94	72.113	ENSCPBG00000024487	PDCD11	99	73.315	Chrysemys_picta_bellii
ENSRNOG00000020304	Pdcd11	86	44.487	ENSCING00000002715	-	92	34.066	Ciona_intestinalis
ENSRNOG00000020304	Pdcd11	99	81.023	ENSCANG00000043300	PDCD11	100	80.628	Colobus_angolensis_palliatus
ENSRNOG00000020304	Pdcd11	99	85.828	ENSCGRG00001006458	Pdcd11	100	85.828	Cricetulus_griseus_chok1gshd
ENSRNOG00000020304	Pdcd11	99	85.775	ENSCGRG00000003583	Pdcd11	100	85.775	Cricetulus_griseus_crigri
ENSRNOG00000020304	Pdcd11	97	43.067	ENSCSEG00000010739	pdcd11	99	43.308	Cynoglossus_semilaevis
ENSRNOG00000020304	Pdcd11	89	62.573	ENSCVAG00000018903	pdcd11	96	61.404	Cyprinodon_variegatus
ENSRNOG00000020304	Pdcd11	99	42.569	ENSDARG00000052480	pdcd11	99	42.561	Danio_rerio
ENSRNOG00000020304	Pdcd11	99	77.630	ENSDNOG00000013838	PDCD11	100	77.577	Dasypus_novemcinctus
ENSRNOG00000020304	Pdcd11	99	79.744	ENSDORG00000010420	Pdcd11	100	79.744	Dipodomys_ordii
ENSRNOG00000020304	Pdcd11	68	39.873	FBgn0039182	CG5728	74	40.989	Drosophila_melanogaster
ENSRNOG00000020304	Pdcd11	95	66.835	ENSETEG00000000813	PDCD11	100	66.387	Echinops_telfairi
ENSRNOG00000020304	Pdcd11	76	52.174	ENSEBUG00000002358	-	92	53.287	Eptatretus_burgeri
ENSRNOG00000020304	Pdcd11	96	79.744	ENSEASG00005015159	PDCD11	100	79.855	Equus_asinus_asinus
ENSRNOG00000020304	Pdcd11	99	79.670	ENSECAG00000020507	PDCD11	100	79.351	Equus_caballus
ENSRNOG00000020304	Pdcd11	98	86.000	ENSEEUG00000009245	PDCD11	91	86.000	Erinaceus_europaeus
ENSRNOG00000020304	Pdcd11	99	44.023	ENSELUG00000004211	pdcd11	99	44.135	Esox_lucius
ENSRNOG00000020304	Pdcd11	99	78.777	ENSFCAG00000002384	PDCD11	99	78.936	Felis_catus
ENSRNOG00000020304	Pdcd11	99	55.024	ENSFALG00000008775	PDCD11	99	55.024	Ficedula_albicollis
ENSRNOG00000020304	Pdcd11	99	77.601	ENSFDAG00000009532	PDCD11	100	77.229	Fukomys_damarensis
ENSRNOG00000020304	Pdcd11	88	66.892	ENSFHEG00000022997	pdcd11	95	67.958	Fundulus_heteroclitus
ENSRNOG00000020304	Pdcd11	92	43.168	ENSGMOG00000004186	pdcd11	94	43.030	Gadus_morhua
ENSRNOG00000020304	Pdcd11	75	53.483	ENSGALG00000008265	PDCD11	99	52.719	Gallus_gallus
ENSRNOG00000020304	Pdcd11	99	42.611	ENSGAFG00000012806	pdcd11	99	48.421	Gambusia_affinis
ENSRNOG00000020304	Pdcd11	99	43.061	ENSGACG00000018233	pdcd11	96	59.843	Gasterosteus_aculeatus
ENSRNOG00000020304	Pdcd11	95	58.742	ENSGAGG00000024314	PDCD11	99	58.565	Gopherus_agassizii
ENSRNOG00000020304	Pdcd11	99	80.704	ENSGGOG00000011621	PDCD11	100	80.650	Gorilla_gorilla
ENSRNOG00000020304	Pdcd11	96	60.800	ENSHBUG00000020226	pdcd11	99	43.554	Haplochromis_burtoni
ENSRNOG00000020304	Pdcd11	99	77.742	ENSHGLG00000001462	PDCD11	100	77.406	Heterocephalus_glaber_female
ENSRNOG00000020304	Pdcd11	99	77.050	ENSHGLG00100018779	PDCD11	100	76.874	Heterocephalus_glaber_male
ENSRNOG00000020304	Pdcd11	99	42.684	ENSHCOG00000016006	pdcd11	99	43.016	Hippocampus_comes
ENSRNOG00000020304	Pdcd11	62	40.085	ENSIPUG00000015102	pdcd11	99	41.756	Ictalurus_punctatus
ENSRNOG00000020304	Pdcd11	99	80.426	ENSSTOG00000014553	PDCD11	100	80.372	Ictidomys_tridecemlineatus
ENSRNOG00000020304	Pdcd11	99	80.490	ENSJJAG00000015523	Pdcd11	100	80.714	Jaculus_jaculus
ENSRNOG00000020304	Pdcd11	99	48.015	ENSLOCG00000011818	pdcd11	99	47.771	Lepisosteus_oculatus
ENSRNOG00000020304	Pdcd11	99	76.997	ENSLAFG00000008398	PDCD11	100	76.997	Loxodonta_africana
ENSRNOG00000020304	Pdcd11	99	81.503	ENSMFAG00000044058	PDCD11	100	81.107	Macaca_fascicularis
ENSRNOG00000020304	Pdcd11	99	81.450	ENSMMUG00000007058	PDCD11	100	81.054	Macaca_mulatta
ENSRNOG00000020304	Pdcd11	99	81.397	ENSMNEG00000040726	PDCD11	99	81.001	Macaca_nemestrina
ENSRNOG00000020304	Pdcd11	99	80.277	ENSMLEG00000040978	PDCD11	100	80.255	Mandrillus_leucophaeus
ENSRNOG00000020304	Pdcd11	99	42.774	ENSMAMG00000009572	pdcd11	99	42.970	Mastacembelus_armatus
ENSRNOG00000020304	Pdcd11	96	60.800	ENSMZEG00005008949	pdcd11	99	43.395	Maylandia_zebra
ENSRNOG00000020304	Pdcd11	99	55.332	ENSMGAG00000010482	PDCD11	99	55.050	Meleagris_gallopavo
ENSRNOG00000020304	Pdcd11	90	88.069	ENSMAUG00000014924	Pdcd11	97	88.178	Mesocricetus_auratus
ENSRNOG00000020304	Pdcd11	99	79.861	ENSMICG00000012421	PDCD11	100	79.808	Microcebus_murinus
ENSRNOG00000020304	Pdcd11	99	86.110	ENSMOCG00000021792	Pdcd11	100	86.110	Microtus_ochrogaster
ENSRNOG00000020304	Pdcd11	99	39.643	ENSMMOG00000007572	pdcd11	97	43.150	Mola_mola
ENSRNOG00000020304	Pdcd11	99	60.053	ENSMODG00000011077	PDCD11	99	60.201	Monodelphis_domestica
ENSRNOG00000020304	Pdcd11	99	38.689	ENSMALG00000003859	pdcd11	98	42.489	Monopterus_albus
ENSRNOG00000020304	Pdcd11	99	89.729	MGP_CAROLIEiJ_G0023050	Pdcd11	100	89.675	Mus_caroli
ENSRNOG00000020304	Pdcd11	99	90.058	ENSMUSG00000025047	Pdcd11	100	90.005	Mus_musculus
ENSRNOG00000020304	Pdcd11	99	90.479	MGP_PahariEiJ_G0014540	Pdcd11	100	90.479	Mus_pahari
ENSRNOG00000020304	Pdcd11	99	90.261	MGP_SPRETEiJ_G0023971	Pdcd11	100	90.208	Mus_spretus
ENSRNOG00000020304	Pdcd11	99	78.743	ENSMPUG00000016829	PDCD11	100	79.009	Mustela_putorius_furo
ENSRNOG00000020304	Pdcd11	99	79.607	ENSMLUG00000004997	PDCD11	100	79.788	Myotis_lucifugus
ENSRNOG00000020304	Pdcd11	99	83.902	ENSNGAG00000018143	Pdcd11	100	83.902	Nannospalax_galili
ENSRNOG00000020304	Pdcd11	85	57.784	ENSNBRG00000021596	pdcd11	99	55.775	Neolamprologus_brichardi
ENSRNOG00000020304	Pdcd11	99	78.038	ENSNLEG00000026700	PDCD11	100	77.985	Nomascus_leucogenys
ENSRNOG00000020304	Pdcd11	71	79.476	ENSMEUG00000013719	-	71	79.476	Notamacropus_eugenii
ENSRNOG00000020304	Pdcd11	99	75.240	ENSOPRG00000010593	PDCD11	100	75.186	Ochotona_princeps
ENSRNOG00000020304	Pdcd11	99	75.897	ENSODEG00000008079	PDCD11	99	75.303	Octodon_degus
ENSRNOG00000020304	Pdcd11	96	61.067	ENSONIG00000018835	pdcd11	99	43.714	Oreochromis_niloticus
ENSRNOG00000020304	Pdcd11	99	58.739	ENSOANG00000001636	-	99	58.515	Ornithorhynchus_anatinus
ENSRNOG00000020304	Pdcd11	99	79.213	ENSOCUG00000006312	PDCD11	100	79.266	Oryctolagus_cuniculus
ENSRNOG00000020304	Pdcd11	99	42.812	ENSORLG00020003642	pdcd11	99	42.706	Oryzias_latipes_hni
ENSRNOG00000020304	Pdcd11	99	42.819	ENSORLG00015001618	pdcd11	99	42.766	Oryzias_latipes_hsok
ENSRNOG00000020304	Pdcd11	75	43.189	ENSOMEG00000010904	pdcd11	99	43.429	Oryzias_melastigma
ENSRNOG00000020304	Pdcd11	99	78.473	ENSOGAG00000008683	PDCD11	100	78.583	Otolemur_garnettii
ENSRNOG00000020304	Pdcd11	99	76.289	ENSOARG00000003719	PDCD11	100	76.077	Ovis_aries
ENSRNOG00000020304	Pdcd11	99	78.309	ENSPPAG00000024593	PDCD11	100	78.309	Pan_paniscus
ENSRNOG00000020304	Pdcd11	99	78.564	ENSPPRG00000015133	PDCD11	99	78.777	Panthera_pardus
ENSRNOG00000020304	Pdcd11	99	78.511	ENSPTIG00000011433	PDCD11	99	78.723	Panthera_tigris_altaica
ENSRNOG00000020304	Pdcd11	99	80.788	ENSPTRG00000002911	PDCD11	100	80.788	Pan_troglodytes
ENSRNOG00000020304	Pdcd11	99	81.343	ENSPANG00000020959	PDCD11	100	80.947	Papio_anubis
ENSRNOG00000020304	Pdcd11	99	44.835	ENSPKIG00000000973	pdcd11	99	44.822	Paramormyrops_kingsleyae
ENSRNOG00000020304	Pdcd11	77	56.246	ENSPSIG00000005102	PDCD11	95	56.039	Pelodiscus_sinensis
ENSRNOG00000020304	Pdcd11	64	62.300	ENSPMGG00000007289	pdcd11	82	65.035	Periophthalmus_magnuspinnatus
ENSRNOG00000020304	Pdcd11	99	85.988	ENSPEMG00000010315	Pdcd11	100	86.148	Peromyscus_maniculatus_bairdii
ENSRNOG00000020304	Pdcd11	99	41.930	ENSPMAG00000003098	pdcd11	99	41.497	Petromyzon_marinus
ENSRNOG00000020304	Pdcd11	99	64.044	ENSPCIG00000001118	PDCD11	100	63.828	Phascolarctos_cinereus
ENSRNOG00000020304	Pdcd11	99	43.031	ENSPFOG00000006012	pdcd11	99	43.340	Poecilia_formosa
ENSRNOG00000020304	Pdcd11	96	47.016	ENSPLAG00000014494	pdcd11	99	48.035	Poecilia_latipinna
ENSRNOG00000020304	Pdcd11	91	54.620	ENSPMEG00000018177	pdcd11	98	54.509	Poecilia_mexicana
ENSRNOG00000020304	Pdcd11	99	43.160	ENSPREG00000000475	pdcd11	99	43.529	Poecilia_reticulata
ENSRNOG00000020304	Pdcd11	99	79.814	ENSPPYG00000002621	PDCD11	100	79.286	Pongo_abelii
ENSRNOG00000020304	Pdcd11	73	71.069	ENSPCAG00000011663	PDCD11	75	71.069	Procavia_capensis
ENSRNOG00000020304	Pdcd11	99	72.377	ENSPCOG00000023327	PDCD11	100	72.377	Propithecus_coquereli
ENSRNOG00000020304	Pdcd11	99	77.937	ENSPVAG00000004176	PDCD11	100	77.884	Pteropus_vampyrus
ENSRNOG00000020304	Pdcd11	96	60.800	ENSPNYG00000003979	pdcd11	99	43.660	Pundamilia_nyererei
ENSRNOG00000020304	Pdcd11	95	43.905	ENSPNAG00000017225	pdcd11	99	44.494	Pygocentrus_nattereri
ENSRNOG00000020304	Pdcd11	99	81.077	ENSRBIG00000011889	PDCD11	100	80.681	Rhinopithecus_bieti
ENSRNOG00000020304	Pdcd11	99	81.130	ENSRROG00000030483	PDCD11	100	80.734	Rhinopithecus_roxellana
ENSRNOG00000020304	Pdcd11	86	47.445	YMR229C	-	95	41.667	Saccharomyces_cerevisiae
ENSRNOG00000020304	Pdcd11	99	79.886	ENSSBOG00000030308	PDCD11	99	79.886	Saimiri_boliviensis_boliviensis
ENSRNOG00000020304	Pdcd11	99	62.851	ENSSHAG00000018258	PDCD11	99	62.845	Sarcophilus_harrisii
ENSRNOG00000020304	Pdcd11	99	45.667	ENSSFOG00015003881	pdcd11	99	45.663	Scleropages_formosus
ENSRNOG00000020304	Pdcd11	99	43.446	ENSSMAG00000006612	pdcd11	99	43.522	Scophthalmus_maximus
ENSRNOG00000020304	Pdcd11	95	49.088	ENSSDUG00000021302	pdcd11	99	49.394	Seriola_dumerili
ENSRNOG00000020304	Pdcd11	80	89.286	ENSSARG00000002540	PDCD11	74	89.286	Sorex_araneus
ENSRNOG00000020304	Pdcd11	97	41.839	ENSSPAG00000017558	pdcd11	100	42.071	Stegastes_partitus
ENSRNOG00000020304	Pdcd11	99	77.577	ENSSSCG00000010599	PDCD11	100	77.710	Sus_scrofa
ENSRNOG00000020304	Pdcd11	75	40.909	ENSTRUG00000014291	pdcd11	99	40.772	Takifugu_rubripes
ENSRNOG00000020304	Pdcd11	99	43.075	ENSTNIG00000012085	pdcd11	99	43.122	Tetraodon_nigroviridis
ENSRNOG00000020304	Pdcd11	99	74.588	ENSTBEG00000001893	PDCD11	100	74.694	Tupaia_belangeri
ENSRNOG00000020304	Pdcd11	99	73.500	ENSTTRG00000003356	PDCD11	99	73.500	Tursiops_truncatus
ENSRNOG00000020304	Pdcd11	99	78.427	ENSUAMG00000018015	PDCD11	100	78.533	Ursus_americanus
ENSRNOG00000020304	Pdcd11	99	77.371	ENSUMAG00000023567	PDCD11	100	77.424	Ursus_maritimus
ENSRNOG00000020304	Pdcd11	72	82.090	ENSVPAG00000007405	PDCD11	80	82.090	Vicugna_pacos
ENSRNOG00000020304	Pdcd11	99	78.796	ENSVVUG00000004457	PDCD11	100	78.743	Vulpes_vulpes
ENSRNOG00000020304	Pdcd11	99	48.431	ENSXETG00000009482	pdcd11	99	48.434	Xenopus_tropicalis
ENSRNOG00000020304	Pdcd11	99	37.982	ENSXCOG00000012420	pdcd11	96	50.148	Xiphophorus_couchianus
ENSRNOG00000020304	Pdcd11	99	43.220	ENSXMAG00000004638	pdcd11	99	43.515	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008134	transcription factor binding	-	IEA	Function
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008150	biological_process	-	ND	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component