EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020376 (Gene tree)
Gene ID: 294025
Gene Symbol: Stn1
Alias: LOC294025|Obfc1
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 33966 bases
Position: chr1:267281764-267315729
Accession: 1305637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000027614	tRNA_anti-codon	PF01336.25	8.7e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000027614	-	1608	XM_006231472	ENSRNOP00000027614	377 (aa)	XP_006231534	A0A0H2UHR9

Gene Model

Click here to download ENSRNOG00000020376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020376	Stn1	98	70.081	ENSG00000107960	STN1	100	70.081	Homo_sapiens
ENSRNOG00000020376	Stn1	99	66.048	ENSAMEG00000017971	STN1	99	66.048	Ailuropoda_melanoleuca
ENSRNOG00000020376	Stn1	98	56.720	ENSAPLG00000006661	STN1	100	56.720	Anas_platyrhynchos
ENSRNOG00000020376	Stn1	98	46.361	ENSACAG00000004954	STN1	100	46.361	Anolis_carolinensis
ENSRNOG00000020376	Stn1	98	69.811	ENSANAG00000038147	STN1	100	69.811	Aotus_nancymaae
ENSRNOG00000020376	Stn1	99	68.435	ENSBTAG00000015019	STN1	100	68.733	Bos_taurus
ENSRNOG00000020376	Stn1	98	69.272	ENSCJAG00000040388	STN1	100	69.272	Callithrix_jacchus
ENSRNOG00000020376	Stn1	98	68.182	ENSCAFG00000010483	STN1	100	68.182	Canis_familiaris
ENSRNOG00000020376	Stn1	98	68.011	ENSCAFG00020010650	STN1	100	68.011	Canis_lupus_dingo
ENSRNOG00000020376	Stn1	98	68.194	ENSCHIG00000019425	-	100	68.733	Capra_hircus
ENSRNOG00000020376	Stn1	99	59.840	ENSCHIG00000003253	-	100	60.372	Capra_hircus
ENSRNOG00000020376	Stn1	86	68.098	ENSCAPG00000016278	STN1	100	68.098	Cavia_aperea
ENSRNOG00000020376	Stn1	100	68.783	ENSCPOG00000006273	STN1	100	68.783	Cavia_porcellus
ENSRNOG00000020376	Stn1	98	70.620	ENSCCAG00000020507	STN1	100	69.811	Cebus_capucinus
ENSRNOG00000020376	Stn1	98	69.272	ENSCATG00000043103	STN1	100	69.272	Cercocebus_atys
ENSRNOG00000020376	Stn1	100	67.460	ENSCLAG00000001617	STN1	100	67.460	Chinchilla_lanigera
ENSRNOG00000020376	Stn1	98	69.811	ENSCSAG00000005318	STN1	100	69.811	Chlorocebus_sabaeus
ENSRNOG00000020376	Stn1	98	55.795	ENSCPBG00000024481	STN1	100	55.795	Chrysemys_picta_bellii
ENSRNOG00000020376	Stn1	98	69.811	ENSCANG00000029004	STN1	100	69.811	Colobus_angolensis_palliatus
ENSRNOG00000020376	Stn1	100	72.751	ENSCGRG00001023175	Stn1	100	72.751	Cricetulus_griseus_chok1gshd
ENSRNOG00000020376	Stn1	100	82.011	ENSCGRG00000004324	Stn1	100	82.011	Cricetulus_griseus_crigri
ENSRNOG00000020376	Stn1	95	42.507	ENSDARG00000007734	stn1	96	42.507	Danio_rerio
ENSRNOG00000020376	Stn1	84	68.652	ENSDNOG00000011022	STN1	99	68.652	Dasypus_novemcinctus
ENSRNOG00000020376	Stn1	94	69.748	ENSDORG00000005994	Stn1	100	70.081	Dipodomys_ordii
ENSRNOG00000020376	Stn1	98	62.534	ENSETEG00000013967	STN1	100	62.534	Echinops_telfairi
ENSRNOG00000020376	Stn1	98	70.699	ENSEASG00005015134	STN1	100	70.699	Equus_asinus_asinus
ENSRNOG00000020376	Stn1	98	69.892	ENSECAG00000023477	STN1	100	70.161	Equus_caballus
ENSRNOG00000020376	Stn1	94	68.347	ENSFCAG00000030378	STN1	100	68.194	Felis_catus
ENSRNOG00000020376	Stn1	98	54.839	ENSFALG00000008791	STN1	100	54.839	Ficedula_albicollis
ENSRNOG00000020376	Stn1	100	64.815	ENSFDAG00000007528	STN1	100	64.815	Fukomys_damarensis
ENSRNOG00000020376	Stn1	98	55.914	ENSGALG00000008304	STN1	100	55.914	Gallus_gallus
ENSRNOG00000020376	Stn1	83	53.333	ENSGAGG00000003673	STN1	93	53.333	Gopherus_agassizii
ENSRNOG00000020376	Stn1	98	70.081	ENSGGOG00000008979	STN1	100	70.081	Gorilla_gorilla
ENSRNOG00000020376	Stn1	100	65.608	ENSHGLG00000002775	OBFC1	100	65.608	Heterocephalus_glaber_female
ENSRNOG00000020376	Stn1	100	65.344	ENSHGLG00100012701	STN1	100	65.344	Heterocephalus_glaber_male
ENSRNOG00000020376	Stn1	96	39.037	ENSHCOG00000002048	stn1	98	39.037	Hippocampus_comes
ENSRNOG00000020376	Stn1	100	68.783	ENSSTOG00000011905	STN1	100	68.783	Ictidomys_tridecemlineatus
ENSRNOG00000020376	Stn1	100	65.963	ENSJJAG00000020389	Stn1	100	65.963	Jaculus_jaculus
ENSRNOG00000020376	Stn1	97	45.333	ENSLACG00000012381	STN1	99	45.333	Latimeria_chalumnae
ENSRNOG00000020376	Stn1	95	68.508	ENSLAFG00000004232	STN1	99	67.717	Loxodonta_africana
ENSRNOG00000020376	Stn1	98	69.272	ENSMFAG00000041817	STN1	100	69.272	Macaca_fascicularis
ENSRNOG00000020376	Stn1	98	69.272	ENSMMUG00000015323	STN1	100	69.272	Macaca_mulatta
ENSRNOG00000020376	Stn1	98	69.542	ENSMNEG00000031906	STN1	100	69.542	Macaca_nemestrina
ENSRNOG00000020376	Stn1	98	69.542	ENSMLEG00000040619	STN1	100	69.542	Mandrillus_leucophaeus
ENSRNOG00000020376	Stn1	99	56.878	ENSMGAG00000010550	STN1	99	56.878	Meleagris_gallopavo
ENSRNOG00000020376	Stn1	99	83.245	ENSMAUG00000015671	Stn1	99	83.245	Mesocricetus_auratus
ENSRNOG00000020376	Stn1	98	66.216	ENSMICG00000012547	STN1	100	66.757	Microcebus_murinus
ENSRNOG00000020376	Stn1	100	75.495	ENSMOCG00000009637	Stn1	100	75.495	Microtus_ochrogaster
ENSRNOG00000020376	Stn1	98	60.108	ENSMODG00000011003	STN1	100	60.108	Monodelphis_domestica
ENSRNOG00000020376	Stn1	100	88.360	MGP_CAROLIEiJ_G0023057	Stn1	100	88.360	Mus_caroli
ENSRNOG00000020376	Stn1	100	87.566	ENSMUSG00000042694	Stn1	100	87.566	Mus_musculus
ENSRNOG00000020376	Stn1	100	87.302	MGP_PahariEiJ_G0014547	Stn1	100	87.302	Mus_pahari
ENSRNOG00000020376	Stn1	100	87.037	MGP_SPRETEiJ_G0023978	Stn1	100	87.037	Mus_spretus
ENSRNOG00000020376	Stn1	98	62.432	ENSMPUG00000016800	STN1	100	62.432	Mustela_putorius_furo
ENSRNOG00000020376	Stn1	99	67.368	ENSMLUG00000002037	STN1	99	67.368	Myotis_lucifugus
ENSRNOG00000020376	Stn1	100	74.868	ENSNGAG00000023986	Stn1	100	74.868	Nannospalax_galili
ENSRNOG00000020376	Stn1	98	70.350	ENSNLEG00000015282	STN1	100	70.350	Nomascus_leucogenys
ENSRNOG00000020376	Stn1	98	67.116	ENSOPRG00000010707	STN1	100	67.116	Ochotona_princeps
ENSRNOG00000020376	Stn1	100	62.434	ENSODEG00000007270	STN1	100	62.434	Octodon_degus
ENSRNOG00000020376	Stn1	98	57.682	ENSOANG00000001628	STN1	100	57.682	Ornithorhynchus_anatinus
ENSRNOG00000020376	Stn1	100	71.618	ENSOCUG00000003028	STN1	100	71.618	Oryctolagus_cuniculus
ENSRNOG00000020376	Stn1	96	40.054	ENSORLG00000002353	stn1	99	39.623	Oryzias_latipes
ENSRNOG00000020376	Stn1	96	39.788	ENSORLG00020012935	stn1	98	39.788	Oryzias_latipes_hni
ENSRNOG00000020376	Stn1	96	40.270	ENSORLG00015012154	stn1	98	40.270	Oryzias_latipes_hsok
ENSRNOG00000020376	Stn1	99	66.755	ENSOGAG00000008722	STN1	99	66.755	Otolemur_garnettii
ENSRNOG00000020376	Stn1	99	67.368	ENSOARG00000004883	STN1	99	67.368	Ovis_aries
ENSRNOG00000020376	Stn1	98	70.081	ENSPPAG00000030947	STN1	100	70.081	Pan_paniscus
ENSRNOG00000020376	Stn1	94	68.347	ENSPPRG00000010476	STN1	100	68.194	Panthera_pardus
ENSRNOG00000020376	Stn1	94	66.482	ENSPTIG00000017333	STN1	100	67.467	Panthera_tigris_altaica
ENSRNOG00000020376	Stn1	98	70.081	ENSPTRG00000002919	STN1	100	70.081	Pan_troglodytes
ENSRNOG00000020376	Stn1	98	69.272	ENSPANG00000020926	STN1	100	69.272	Papio_anubis
ENSRNOG00000020376	Stn1	97	39.467	ENSPKIG00000000721	stn1	98	39.467	Paramormyrops_kingsleyae
ENSRNOG00000020376	Stn1	98	53.351	ENSPSIG00000010802	STN1	100	53.351	Pelodiscus_sinensis
ENSRNOG00000020376	Stn1	100	80.475	ENSPEMG00000013944	Stn1	100	80.475	Peromyscus_maniculatus_bairdii
ENSRNOG00000020376	Stn1	98	59.677	ENSPCIG00000024497	STN1	100	59.677	Phascolarctos_cinereus
ENSRNOG00000020376	Stn1	98	69.811	ENSPPYG00000002628	STN1	100	69.811	Pongo_abelii
ENSRNOG00000020376	Stn1	98	68.919	ENSPCOG00000017648	STN1	100	68.919	Propithecus_coquereli
ENSRNOG00000020376	Stn1	98	65.768	ENSPVAG00000004187	STN1	100	65.768	Pteropus_vampyrus
ENSRNOG00000020376	Stn1	98	69.542	ENSRBIG00000039819	STN1	100	69.542	Rhinopithecus_bieti
ENSRNOG00000020376	Stn1	98	69.811	ENSRROG00000013903	STN1	100	69.811	Rhinopithecus_roxellana
ENSRNOG00000020376	Stn1	98	71.159	ENSSBOG00000031516	STN1	100	70.350	Saimiri_boliviensis_boliviensis
ENSRNOG00000020376	Stn1	98	59.299	ENSSHAG00000017550	STN1	100	59.299	Sarcophilus_harrisii
ENSRNOG00000020376	Stn1	96	41.823	ENSSFOG00015004107	stn1	98	41.823	Scleropages_formosus
ENSRNOG00000020376	Stn1	99	67.733	ENSSSCG00000010605	STN1	86	67.733	Sus_scrofa
ENSRNOG00000020376	Stn1	98	54.155	ENSTGUG00000010354	STN1	100	54.155	Taeniopygia_guttata
ENSRNOG00000020376	Stn1	96	44.932	ENSTNIG00000014162	stn1	96	44.932	Tetraodon_nigroviridis
ENSRNOG00000020376	Stn1	66	70.408	ENSTBEG00000000659	STN1	66	70.408	Tupaia_belangeri
ENSRNOG00000020376	Stn1	98	68.464	ENSTTRG00000003375	STN1	100	68.464	Tursiops_truncatus
ENSRNOG00000020376	Stn1	98	63.612	ENSUMAG00000023647	STN1	100	63.612	Ursus_maritimus
ENSRNOG00000020376	Stn1	98	69.811	ENSVPAG00000002530	STN1	100	69.811	Vicugna_pacos
ENSRNOG00000020376	Stn1	99	67.460	ENSVVUG00000004636	-	61	67.460	Vulpes_vulpes
ENSRNOG00000020376	Stn1	94	44.598	ENSXETG00000011402	STN1	99	44.054	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000723	telomere maintenance	-	ISO	Process
GO:0000723	telomere maintenance	-	ISS	Process
GO:0000784	nuclear chromosome, telomeric region	21873635.	IBA	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISS	Component
GO:0001650	fibrillar center	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0003697	single-stranded DNA binding	-	ISO	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0010833	telomere maintenance via telomere lengthening	21873635.	IBA	Process
GO:0010833	telomere maintenance via telomere lengthening	-	IEA	Process
GO:0010833	telomere maintenance via telomere lengthening	-	ISO	Process
GO:0010833	telomere maintenance via telomere lengthening	-	ISS	Process
GO:0016233	telomere capping	21873635.	IBA	Process
GO:0016233	telomere capping	-	IEA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	21873635.	IBA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	-	IEA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	-	ISO	Process
GO:0042162	telomeric DNA binding	21873635.	IBA	Function
GO:0042162	telomeric DNA binding	-	ISO	Function
GO:0043047	single-stranded telomeric DNA binding	21873635.	IBA	Function
GO:0043047	single-stranded telomeric DNA binding	-	IEA	Function
GO:0043047	single-stranded telomeric DNA binding	-	ISO	Function
GO:0043047	single-stranded telomeric DNA binding	-	ISS	Function
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045111	intermediate filament cytoskeleton	-	IEA	Component
GO:0045111	intermediate filament cytoskeleton	-	ISO	Component
GO:0045740	positive regulation of DNA replication	-	IEA	Process
GO:0045740	positive regulation of DNA replication	-	ISO	Process
GO:0045740	positive regulation of DNA replication	-	ISS	Process
GO:1990879	CST complex	21873635.	IBA	Component
GO:1990879	CST complex	-	IEA	Component
GO:1990879	CST complex	-	ISO	Component