EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020475 (Gene tree)
Gene ID: 29678
Gene Symbol: Sart1
Alias: SART-1|rSART-1
Full Name: spliceosome associated factor 1%2C recruiter of U4/U6.U5 tri-snRNP
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 8833 bases
Position: chr1:220762349-220771181
Accession: 61930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000027812	SART-1	PF03343.13	1.5e-148	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000027811	-	2701	-	ENSRNOP00000027812	806 (aa)	-	Q5XIW8

Gene Model

Click here to download ENSRNOG00000020475's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020475	Sart1	100	93.928	ENSG00000175467	SART1	100	93.928	Homo_sapiens
ENSRNOG00000020475	Sart1	87	92.308	ENSAMEG00000017260	SART1	98	93.913	Ailuropoda_melanoleuca
ENSRNOG00000020475	Sart1	100	92.203	ENSANAG00000037219	SART1	99	100.000	Aotus_nancymaae
ENSRNOG00000020475	Sart1	100	93.556	ENSBTAG00000003094	SART1	100	93.556	Bos_taurus
ENSRNOG00000020475	Sart1	78	36.571	WBGene00017605	F19F10.9	77	37.346	Caenorhabditis_elegans
ENSRNOG00000020475	Sart1	100	92.450	ENSCJAG00000001741	SART1	100	93.069	Callithrix_jacchus
ENSRNOG00000020475	Sart1	100	93.680	ENSCAFG00000013103	SART1	100	93.680	Canis_familiaris
ENSRNOG00000020475	Sart1	100	94.176	ENSCAFG00020015337	SART1	100	94.176	Canis_lupus_dingo
ENSRNOG00000020475	Sart1	100	91.326	ENSCHIG00000016364	SART1	100	91.202	Capra_hircus
ENSRNOG00000020475	Sart1	87	83.523	ENSTSYG00000029994	SART1	91	84.226	Carlito_syrichta
ENSRNOG00000020475	Sart1	85	94.006	ENSCAPG00000016369	SART1	96	94.006	Cavia_aperea
ENSRNOG00000020475	Sart1	86	92.011	ENSCPOG00000020882	SART1	99	91.655	Cavia_porcellus
ENSRNOG00000020475	Sart1	100	92.450	ENSCCAG00000037852	SART1	99	100.000	Cebus_capucinus
ENSRNOG00000020475	Sart1	100	93.061	ENSCATG00000032953	SART1	99	100.000	Cercocebus_atys
ENSRNOG00000020475	Sart1	100	95.415	ENSCLAG00000016593	SART1	100	95.415	Chinchilla_lanigera
ENSRNOG00000020475	Sart1	100	93.680	ENSCSAG00000008081	SART1	100	93.432	Chlorocebus_sabaeus
ENSRNOG00000020475	Sart1	100	74.275	ENSCPBG00000023434	SART1	100	75.451	Chrysemys_picta_bellii
ENSRNOG00000020475	Sart1	99	35.673	ENSCING00000009048	-	81	38.810	Ciona_intestinalis
ENSRNOG00000020475	Sart1	94	35.294	ENSCSAVG00000009337	-	99	35.627	Ciona_savignyi
ENSRNOG00000020475	Sart1	94	85.059	ENSCANG00000043164	SART1	96	86.089	Colobus_angolensis_palliatus
ENSRNOG00000020475	Sart1	100	98.267	ENSCGRG00001021367	Sart1	100	98.267	Cricetulus_griseus_chok1gshd
ENSRNOG00000020475	Sart1	89	96.940	ENSCGRG00000015292	Sart1	99	96.940	Cricetulus_griseus_crigri
ENSRNOG00000020475	Sart1	100	64.303	ENSCVAG00000009800	SART1	100	64.699	Cyprinodon_variegatus
ENSRNOG00000020475	Sart1	51	88.780	ENSDNOG00000038920	-	89	92.933	Dasypus_novemcinctus
ENSRNOG00000020475	Sart1	84	82.275	ENSDNOG00000041860	-	100	83.161	Dasypus_novemcinctus
ENSRNOG00000020475	Sart1	100	86.741	ENSDORG00000011887	Sart1	94	92.683	Dipodomys_ordii
ENSRNOG00000020475	Sart1	85	40.483	FBgn0032388	CG6686	68	47.126	Drosophila_melanogaster
ENSRNOG00000020475	Sart1	66	54.514	ENSEBUG00000006203	SART1	57	61.143	Eptatretus_burgeri
ENSRNOG00000020475	Sart1	100	93.704	ENSEASG00005004465	SART1	100	94.074	Equus_asinus_asinus
ENSRNOG00000020475	Sart1	100	93.696	ENSECAG00000023491	TSGA10IP	93	93.696	Equus_caballus
ENSRNOG00000020475	Sart1	100	93.928	ENSFCAG00000013278	SART1	100	93.928	Felis_catus
ENSRNOG00000020475	Sart1	100	92.689	ENSFDAG00000008891	SART1	100	92.317	Fukomys_damarensis
ENSRNOG00000020475	Sart1	100	63.848	ENSFHEG00000010334	SART1	100	63.514	Fundulus_heteroclitus
ENSRNOG00000020475	Sart1	100	63.961	ENSGAFG00000013919	SART1	100	63.190	Gambusia_affinis
ENSRNOG00000020475	Sart1	99	62.192	ENSGACG00000016951	SART1	100	61.406	Gasterosteus_aculeatus
ENSRNOG00000020475	Sart1	100	74.272	ENSGAGG00000022783	SART1	100	75.937	Gopherus_agassizii
ENSRNOG00000020475	Sart1	100	93.804	ENSGGOG00000009457	SART1	99	100.000	Gorilla_gorilla
ENSRNOG00000020475	Sart1	56	52.863	ENSHBUG00000020412	-	68	51.333	Haplochromis_burtoni
ENSRNOG00000020475	Sart1	100	95.043	ENSHGLG00000015022	SART1	100	94.919	Heterocephalus_glaber_female
ENSRNOG00000020475	Sart1	100	94.052	ENSHGLG00100018346	SART1	100	93.680	Heterocephalus_glaber_male
ENSRNOG00000020475	Sart1	100	63.570	ENSHCOG00000007259	SART1	100	62.652	Hippocampus_comes
ENSRNOG00000020475	Sart1	100	65.233	ENSIPUG00000021117	sart1	100	65.560	Ictalurus_punctatus
ENSRNOG00000020475	Sart1	100	95.668	ENSSTOG00000023375	SART1	100	95.668	Ictidomys_tridecemlineatus
ENSRNOG00000020475	Sart1	100	95.303	ENSJJAG00000019103	Sart1	100	95.303	Jaculus_jaculus
ENSRNOG00000020475	Sart1	82	65.865	ENSLACG00000011165	SART1	99	65.327	Latimeria_chalumnae
ENSRNOG00000020475	Sart1	60	70.661	ENSLOCG00000001871	SART1	95	70.686	Lepisosteus_oculatus
ENSRNOG00000020475	Sart1	99	92.040	ENSLAFG00000001768	SART1	100	92.413	Loxodonta_africana
ENSRNOG00000020475	Sart1	100	93.185	ENSMFAG00000002484	SART1	99	100.000	Macaca_fascicularis
ENSRNOG00000020475	Sart1	66	100.000	ENSMMUG00000008065	SART1	99	100.000	Macaca_mulatta
ENSRNOG00000020475	Sart1	100	93.185	ENSMNEG00000035507	SART1	99	100.000	Macaca_nemestrina
ENSRNOG00000020475	Sart1	91	93.342	ENSMLEG00000036259	SART1	100	93.478	Mandrillus_leucophaeus
ENSRNOG00000020475	Sart1	100	97.646	ENSMAUG00000016274	Sart1	100	97.646	Mesocricetus_auratus
ENSRNOG00000020475	Sart1	100	93.588	ENSMICG00000030096	SART1	100	93.588	Microcebus_murinus
ENSRNOG00000020475	Sart1	100	97.893	ENSMOCG00000019815	Sart1	100	97.893	Microtus_ochrogaster
ENSRNOG00000020475	Sart1	90	68.269	ENSMMOG00000004019	SART1	98	66.227	Mola_mola
ENSRNOG00000020475	Sart1	100	76.614	ENSMODG00000009047	SART1	100	75.639	Monodelphis_domestica
ENSRNOG00000020475	Sart1	100	98.513	MGP_CAROLIEiJ_G0022545	Sart1	100	98.513	Mus_caroli
ENSRNOG00000020475	Sart1	100	98.885	ENSMUSG00000039148	Sart1	100	98.885	Mus_musculus
ENSRNOG00000020475	Sart1	100	98.265	MGP_PahariEiJ_G0014042	Sart1	100	98.265	Mus_pahari
ENSRNOG00000020475	Sart1	100	98.885	MGP_SPRETEiJ_G0023459	Sart1	100	98.885	Mus_spretus
ENSRNOG00000020475	Sart1	100	93.680	ENSMPUG00000011394	SART1	100	93.680	Mustela_putorius_furo
ENSRNOG00000020475	Sart1	100	91.759	ENSMLUG00000011078	SART1	100	92.069	Myotis_lucifugus
ENSRNOG00000020475	Sart1	100	92.450	ENSNGAG00000004727	Sart1	100	92.450	Nannospalax_galili
ENSRNOG00000020475	Sart1	100	88.600	ENSNLEG00000005961	SART1	100	100.000	Nomascus_leucogenys
ENSRNOG00000020475	Sart1	100	80.440	ENSMEUG00000004918	SART1	100	80.196	Notamacropus_eugenii
ENSRNOG00000020475	Sart1	100	95.415	ENSODEG00000017777	SART1	100	95.415	Octodon_degus
ENSRNOG00000020475	Sart1	100	64.524	ENSONIG00000021283	SART1	100	64.524	Oreochromis_niloticus
ENSRNOG00000020475	Sart1	100	61.928	ENSORLG00000028400	SART1	100	62.005	Oryzias_latipes
ENSRNOG00000020475	Sart1	100	61.681	ENSORLG00020014721	SART1	100	61.757	Oryzias_latipes_hni
ENSRNOG00000020475	Sart1	100	61.928	ENSORLG00015014467	SART1	100	62.252	Oryzias_latipes_hsok
ENSRNOG00000020475	Sart1	100	62.917	ENSOMEG00000002508	SART1	100	62.794	Oryzias_melastigma
ENSRNOG00000020475	Sart1	100	92.327	ENSOGAG00000016523	SART1	100	92.574	Otolemur_garnettii
ENSRNOG00000020475	Sart1	87	91.465	ENSOARG00000000694	SART1	98	90.566	Ovis_aries
ENSRNOG00000020475	Sart1	100	94.300	ENSPPAG00000030167	SART1	100	100.000	Pan_paniscus
ENSRNOG00000020475	Sart1	100	90.954	ENSPPRG00000015794	SART1	100	92.317	Panthera_pardus
ENSRNOG00000020475	Sart1	68	92.836	ENSPTIG00000017833	SART1	96	72.524	Panthera_tigris_altaica
ENSRNOG00000020475	Sart1	100	94.300	ENSPTRG00000003905	SART1	100	100.000	Pan_troglodytes
ENSRNOG00000020475	Sart1	100	93.061	ENSPANG00000023502	SART1	99	100.000	Papio_anubis
ENSRNOG00000020475	Sart1	91	78.353	ENSPSIG00000002712	SART1	92	78.619	Pelodiscus_sinensis
ENSRNOG00000020475	Sart1	100	89.715	ENSPEMG00000012166	Sart1	94	95.940	Peromyscus_maniculatus_bairdii
ENSRNOG00000020475	Sart1	100	86.675	ENSPCIG00000008311	SART1	100	86.430	Phascolarctos_cinereus
ENSRNOG00000020475	Sart1	100	64.496	ENSPFOG00000019883	SART1	100	64.005	Poecilia_formosa
ENSRNOG00000020475	Sart1	100	64.619	ENSPLAG00000019633	SART1	100	64.128	Poecilia_latipinna
ENSRNOG00000020475	Sart1	100	64.373	ENSPMEG00000013621	SART1	100	63.882	Poecilia_mexicana
ENSRNOG00000020475	Sart1	100	63.100	ENSPREG00000000100	SART1	100	62.531	Poecilia_reticulata
ENSRNOG00000020475	Sart1	100	90.335	ENSPPYG00000003039	SART1	100	90.335	Pongo_abelii
ENSRNOG00000020475	Sart1	73	98.684	ENSPCAG00000011262	SART1	73	98.684	Procavia_capensis
ENSRNOG00000020475	Sart1	100	92.317	ENSPCOG00000008448	SART1	100	93.432	Propithecus_coquereli
ENSRNOG00000020475	Sart1	100	87.392	ENSPVAG00000016969	SART1	100	87.268	Pteropus_vampyrus
ENSRNOG00000020475	Sart1	100	64.648	ENSPNYG00000014765	SART1	100	64.771	Pundamilia_nyererei
ENSRNOG00000020475	Sart1	100	92.193	ENSRBIG00000044079	SART1	99	100.000	Rhinopithecus_bieti
ENSRNOG00000020475	Sart1	100	92.193	ENSRROG00000045251	SART1	99	100.000	Rhinopithecus_roxellana
ENSRNOG00000020475	Sart1	100	92.327	ENSSBOG00000023102	SART1	100	100.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000020475	Sart1	100	82.861	ENSSHAG00000011437	SART1	100	83.107	Sarcophilus_harrisii
ENSRNOG00000020475	Sart1	100	61.247	ENSSFOG00015018792	SART1	100	61.179	Scleropages_formosus
ENSRNOG00000020475	Sart1	100	62.759	ENSSMAG00000001043	SART1	100	61.893	Scophthalmus_maximus
ENSRNOG00000020475	Sart1	91	69.116	ENSSDUG00000019131	SART1	99	66.452	Seriola_dumerili
ENSRNOG00000020475	Sart1	100	65.142	ENSSLDG00000024307	SART1	100	64.532	Seriola_lalandi_dorsalis
ENSRNOG00000020475	Sart1	100	76.306	ENSSPUG00000009399	SART1	100	76.542	Sphenodon_punctatus
ENSRNOG00000020475	Sart1	100	65.389	ENSSPAG00000013156	SART1	100	64.975	Stegastes_partitus
ENSRNOG00000020475	Sart1	100	93.556	ENSSSCG00000012963	SART1	100	93.556	Sus_scrofa
ENSRNOG00000020475	Sart1	100	63.086	ENSTRUG00000025047	SART1	100	62.716	Takifugu_rubripes
ENSRNOG00000020475	Sart1	99	68.936	ENSTBEG00000002397	-	99	68.688	Tupaia_belangeri
ENSRNOG00000020475	Sart1	71	70.660	ENSTBEG00000010370	-	97	70.504	Tupaia_belangeri
ENSRNOG00000020475	Sart1	79	100.000	ENSTBEG00000010864	-	65	100.000	Tupaia_belangeri
ENSRNOG00000020475	Sart1	100	87.748	ENSTTRG00000008751	SART1	100	87.871	Tursiops_truncatus
ENSRNOG00000020475	Sart1	100	85.874	ENSUAMG00000020770	SART1	100	87.856	Ursus_americanus
ENSRNOG00000020475	Sart1	73	91.327	ENSUMAG00000010903	SART1	91	91.156	Ursus_maritimus
ENSRNOG00000020475	Sart1	100	94.424	ENSVVUG00000027041	SART1	100	94.424	Vulpes_vulpes
ENSRNOG00000020475	Sart1	89	72.462	ENSXETG00000011429	sart1	100	69.297	Xenopus_tropicalis
ENSRNOG00000020475	Sart1	100	64.619	ENSXCOG00000005296	SART1	100	64.128	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0000481	maturation of 5S rRNA	21873635.	IBA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0015030	Cajal body	-	IEA	Component
GO:0015030	Cajal body	-	ISO	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0045585	positive regulation of cytotoxic T cell differentiation	-	IEA	Process
GO:0045585	positive regulation of cytotoxic T cell differentiation	-	ISO	Process
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component
GO:0071005	U2-type precatalytic spliceosome	-	IEA	Component
GO:0071005	U2-type precatalytic spliceosome	-	ISO	Component
GO:0071013	catalytic step 2 spliceosome	-	IEA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component