EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020669 (Gene tree)
Gene ID: 309164
Gene Symbol: Ovol1
Alias: LOC309164
Full Name: ovo like transcriptional repressor 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 13210 bases
Position: chr1:220925605-220938814
Accession: 1306956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028081	zf-C2H2	PF00096.26	1.7e-14	1	3
ENSRNOP00000028081	zf-C2H2	PF00096.26	1.7e-14	2	3
ENSRNOP00000028081	zf-C2H2	PF00096.26	1.7e-14	3	3
ENSRNOP00000071100	zf-C2H2	PF00096.26	2e-14	1	3
ENSRNOP00000071100	zf-C2H2	PF00096.26	2e-14	2	3
ENSRNOP00000071100	zf-C2H2	PF00096.26	2e-14	3	3
ENSRNOP00000071100	zf-met	PF12874.7	0.00042	1	2
ENSRNOP00000071100	zf-met	PF12874.7	0.00042	2	2
ENSRNOP00000028081	zf-met	PF12874.7	0.00044	1	2
ENSRNOP00000028081	zf-met	PF12874.7	0.00044	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028081	-	2993	XM_006230794	ENSRNOP00000028081	267 (aa)	XP_008758360	D4A445
ENSRNOT00000081567	-	5101	XM_006230796	ENSRNOP00000071100	267 (aa)	XP_006230858	A0A0G2JZM1

Gene Model

Click here to download ENSRNOG00000020669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000020669	Ovol1	68	42.169	ENSRNOG00000028628	LOC100911196	58	41.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020669	Ovol1	100	94.382	ENSG00000172818	OVOL1	100	94.382	Homo_sapiens
ENSRNOG00000020669	Ovol1	89	93.277	ENSCLAG00000016426	OVOL1	80	93.277	Chinchilla_lanigera
ENSRNOG00000020669	Ovol1	100	71.161	ENSCPBG00000023411	OVOL1	100	71.161	Chrysemys_picta_bellii
ENSRNOG00000020669	Ovol1	88	86.752	ENSDNOG00000024062	OVOL1	98	85.714	Dasypus_novemcinctus
ENSRNOG00000020669	Ovol1	100	95.506	ENSDORG00000028510	Ovol1	100	95.506	Dipodomys_ordii
ENSRNOG00000020669	Ovol1	59	97.452	ENSEEUG00000010161	OVOL1	99	96.835	Erinaceus_europaeus
ENSRNOG00000020669	Ovol1	51	76.642	ENSGALG00000049996	OVOL1	64	74.324	Gallus_gallus
ENSRNOG00000020669	Ovol1	100	71.536	ENSGAGG00000008199	OVOL1	100	71.536	Gopherus_agassizii
ENSRNOG00000020669	Ovol1	100	94.757	ENSJJAG00000024400	Ovol1	100	94.757	Jaculus_jaculus
ENSRNOG00000020669	Ovol1	100	97.004	MGP_CAROLIEiJ_G0022558	Ovol1	100	97.004	Mus_caroli
ENSRNOG00000020669	Ovol1	100	97.004	ENSMUSG00000024922	Ovol1	100	97.004	Mus_musculus
ENSRNOG00000020669	Ovol1	100	96.255	MGP_PahariEiJ_G0014055	Ovol1	100	96.255	Mus_pahari
ENSRNOG00000020669	Ovol1	100	96.629	MGP_SPRETEiJ_G0023472	Ovol1	100	96.629	Mus_spretus
ENSRNOG00000020669	Ovol1	100	93.258	ENSOGAG00000016496	OVOL1	100	93.258	Otolemur_garnettii
ENSRNOG00000020669	Ovol1	96	64.982	ENSPSIG00000002913	OVOL1	100	64.982	Pelodiscus_sinensis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	IEA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0001822	kidney development	-	IEA	Process
GO:0001822	kidney development	-	ISO	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0007283	spermatogenesis	-	IEA	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0007498	mesoderm development	-	IEA	Process
GO:0007498	mesoderm development	-	ISO	Process
GO:0008544	epidermis development	-	ISO	Process
GO:0009913	epidermal cell differentiation	21873635.	IBA	Process
GO:0043565	sequence-specific DNA binding	21873635.	IBA	Function
GO:0043588	skin development	-	IEA	Process
GO:0043588	skin development	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0051729	germline cell cycle switching, mitotic to meiotic cell cycle	-	IEA	Process
GO:0051729	germline cell cycle switching, mitotic to meiotic cell cycle	-	ISO	Process
GO:1901994	negative regulation of meiotic cell cycle phase transition	-	IEA	Process
GO:1901994	negative regulation of meiotic cell cycle phase transition	-	ISO	Process
GO:2000647	negative regulation of stem cell proliferation	-	IEA	Process
GO:2000647	negative regulation of stem cell proliferation	-	ISO	Process