EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020689 (Gene tree)
Gene ID: 309510
Gene Symbol: Cpeb3
Alias: LOC309510|RGD1564670
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 150496 bases
Position: chr1:255665238-255815733
Accession: 1564670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000040393	RRM_1	PF00076.22	2.1e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000047387	-	2667	XM_008760379	ENSRNOP00000040393	756 (aa)	XP_008758601	D4AD99

Gene Model

Click here to download ENSRNOG00000020689's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04114	Oocyte meiosis	KEGG
rno04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000020689	Cpeb3	60	75.051	ENSRNOG00000005043	Cpeb2	71	69.597
ENSRNOG00000020689	Cpeb3	91	59.379	ENSRNOG00000033169	Cpeb4	83	63.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020689	Cpeb3	94	93.408	ENSG00000107864	CPEB3	100	93.408	Homo_sapiens
ENSRNOG00000020689	Cpeb3	94	70.884	ENSAPOG00000003625	cpeb3	100	71.274	Acanthochromis_polyacanthus
ENSRNOG00000020689	Cpeb3	94	83.924	ENSAMEG00000014204	CPEB3	100	83.924	Ailuropoda_melanoleuca
ENSRNOG00000020689	Cpeb3	94	70.204	ENSACIG00000001933	cpeb3	100	70.811	Amphilophus_citrinellus
ENSRNOG00000020689	Cpeb3	94	71.569	ENSAOCG00000015423	cpeb3	100	72.028	Amphiprion_ocellaris
ENSRNOG00000020689	Cpeb3	95	71.862	ENSATEG00000010649	cpeb3	100	73.147	Anabas_testudineus
ENSRNOG00000020689	Cpeb3	94	79.864	ENSACAG00000006335	CPEB3	100	80.707	Anolis_carolinensis
ENSRNOG00000020689	Cpeb3	99	90.777	ENSANAG00000037406	CPEB3	100	91.316	Aotus_nancymaae
ENSRNOG00000020689	Cpeb3	95	70.793	ENSACLG00000018590	cpeb3	90	71.508	Astatotilapia_calliptera
ENSRNOG00000020689	Cpeb3	94	95.084	ENSBTAG00000015450	CPEB3	100	95.084	Bos_taurus
ENSRNOG00000020689	Cpeb3	94	90.204	ENSCJAG00000008495	CPEB3	100	91.020	Callithrix_jacchus
ENSRNOG00000020689	Cpeb3	94	94.093	ENSCAFG00000007423	CPEB3	100	94.093	Canis_familiaris
ENSRNOG00000020689	Cpeb3	94	91.281	ENSCAFG00020001981	CPEB3	100	91.008	Canis_lupus_dingo
ENSRNOG00000020689	Cpeb3	94	91.565	ENSCHIG00000017337	CPEB3	100	91.701	Capra_hircus
ENSRNOG00000020689	Cpeb3	78	90.300	ENSTSYG00000003928	CPEB3	82	90.300	Carlito_syrichta
ENSRNOG00000020689	Cpeb3	99	91.633	ENSCCAG00000033267	CPEB3	100	92.563	Cebus_capucinus
ENSRNOG00000020689	Cpeb3	94	91.725	ENSCATG00000038447	CPEB3	100	92.006	Cercocebus_atys
ENSRNOG00000020689	Cpeb3	63	93.000	ENSCLAG00000011817	CPEB3	100	93.000	Chinchilla_lanigera
ENSRNOG00000020689	Cpeb3	94	91.585	ENSCSAG00000006579	CPEB3	100	91.865	Chlorocebus_sabaeus
ENSRNOG00000020689	Cpeb3	94	83.708	ENSCPBG00000023779	CPEB3	100	83.287	Chrysemys_picta_bellii
ENSRNOG00000020689	Cpeb3	94	91.725	ENSCANG00000040306	CPEB3	100	92.006	Colobus_angolensis_palliatus
ENSRNOG00000020689	Cpeb3	94	93.733	ENSCGRG00001003846	Cpeb3	100	93.733	Cricetulus_griseus_chok1gshd
ENSRNOG00000020689	Cpeb3	53	91.962	ENSCGRG00000002839	Cpeb3	100	91.962	Cricetulus_griseus_crigri
ENSRNOG00000020689	Cpeb3	82	72.043	ENSCSEG00000008423	cpeb3	100	71.319	Cynoglossus_semilaevis
ENSRNOG00000020689	Cpeb3	94	67.511	ENSCVAG00000005998	cpeb3	100	67.972	Cyprinodon_variegatus
ENSRNOG00000020689	Cpeb3	82	71.635	ENSDARG00000060103	cpeb3	100	65.638	Danio_rerio
ENSRNOG00000020689	Cpeb3	94	83.469	ENSDNOG00000048639	CPEB3	100	83.740	Dasypus_novemcinctus
ENSRNOG00000020689	Cpeb3	85	97.609	ENSDORG00000028940	Cpeb3	88	97.609	Dipodomys_ordii
ENSRNOG00000020689	Cpeb3	94	85.097	ENSETEG00000000111	CPEB3	100	84.958	Echinops_telfairi
ENSRNOG00000020689	Cpeb3	82	61.136	ENSEBUG00000010745	cpeb3	79	61.654	Eptatretus_burgeri
ENSRNOG00000020689	Cpeb3	94	92.916	ENSEASG00005011095	CPEB3	100	93.052	Equus_asinus_asinus
ENSRNOG00000020689	Cpeb3	94	92.916	ENSECAG00000000077	CPEB3	100	93.052	Equus_caballus
ENSRNOG00000020689	Cpeb3	94	72.817	ENSELUG00000019251	cpeb3	100	73.099	Esox_lucius
ENSRNOG00000020689	Cpeb3	94	94.093	ENSFCAG00000032380	CPEB3	100	94.093	Felis_catus
ENSRNOG00000020689	Cpeb3	94	84.078	ENSFALG00000007952	CPEB3	87	83.520	Ficedula_albicollis
ENSRNOG00000020689	Cpeb3	82	94.570	ENSFDAG00000016459	CPEB3	88	94.570	Fukomys_damarensis
ENSRNOG00000020689	Cpeb3	99	65.567	ENSFHEG00000021371	cpeb3	100	66.306	Fundulus_heteroclitus
ENSRNOG00000020689	Cpeb3	85	67.474	ENSGMOG00000008307	cpeb3	99	67.020	Gadus_morhua
ENSRNOG00000020689	Cpeb3	94	81.769	ENSGALG00000006912	CPEB3	100	80.952	Gallus_gallus
ENSRNOG00000020689	Cpeb3	94	69.809	ENSGACG00000002944	cpeb3	99	69.986	Gasterosteus_aculeatus
ENSRNOG00000020689	Cpeb3	94	83.146	ENSGAGG00000008528	CPEB3	100	82.444	Gopherus_agassizii
ENSRNOG00000020689	Cpeb3	94	90.082	ENSGGOG00000016441	CPEB3	100	90.489	Gorilla_gorilla
ENSRNOG00000020689	Cpeb3	95	70.000	ENSHBUG00000004097	cpeb3	94	70.604	Haplochromis_burtoni
ENSRNOG00000020689	Cpeb3	94	95.077	ENSHGLG00000014022	CPEB3	100	95.077	Heterocephalus_glaber_female
ENSRNOG00000020689	Cpeb3	94	84.038	ENSHGLG00100005200	CPEB3	100	84.038	Heterocephalus_glaber_male
ENSRNOG00000020689	Cpeb3	94	66.667	ENSHCOG00000005747	cpeb3	96	71.407	Hippocampus_comes
ENSRNOG00000020689	Cpeb3	95	69.542	ENSIPUG00000018571	cpeb3	100	70.805	Ictalurus_punctatus
ENSRNOG00000020689	Cpeb3	94	88.980	ENSSTOG00000028061	CPEB3	100	89.388	Ictidomys_tridecemlineatus
ENSRNOG00000020689	Cpeb3	53	92.199	ENSJJAG00000009135	Cpeb3	100	92.199	Jaculus_jaculus
ENSRNOG00000020689	Cpeb3	94	70.340	ENSLBEG00000025961	cpeb3	100	71.060	Labrus_bergylta
ENSRNOG00000020689	Cpeb3	95	79.050	ENSLACG00000011307	CPEB3	93	78.911	Latimeria_chalumnae
ENSRNOG00000020689	Cpeb3	95	76.430	ENSLOCG00000007131	cpeb3	100	72.925	Lepisosteus_oculatus
ENSRNOG00000020689	Cpeb3	94	89.130	ENSLAFG00000018716	CPEB3	99	96.458	Loxodonta_africana
ENSRNOG00000020689	Cpeb3	84	91.139	ENSMFAG00000025613	CPEB3	92	91.139	Macaca_fascicularis
ENSRNOG00000020689	Cpeb3	94	91.304	ENSMMUG00000015050	CPEB3	100	91.585	Macaca_mulatta
ENSRNOG00000020689	Cpeb3	94	90.896	ENSMNEG00000045465	CPEB3	100	91.176	Macaca_nemestrina
ENSRNOG00000020689	Cpeb3	79	90.300	ENSMLEG00000031794	CPEB3	98	90.300	Mandrillus_leucophaeus
ENSRNOG00000020689	Cpeb3	95	70.755	ENSMAMG00000012794	cpeb3	100	70.300	Mastacembelus_armatus
ENSRNOG00000020689	Cpeb3	95	70.000	ENSMZEG00005012068	cpeb3	100	70.636	Maylandia_zebra
ENSRNOG00000020689	Cpeb3	94	84.078	ENSMGAG00000009148	CPEB3	100	83.520	Meleagris_gallopavo
ENSRNOG00000020689	Cpeb3	94	95.927	ENSMAUG00000002789	Cpeb3	100	95.927	Mesocricetus_auratus
ENSRNOG00000020689	Cpeb3	94	89.660	ENSMICG00000026866	CPEB3	100	90.283	Microcebus_murinus
ENSRNOG00000020689	Cpeb3	94	94.278	ENSMOCG00000016486	Cpeb3	100	94.278	Microtus_ochrogaster
ENSRNOG00000020689	Cpeb3	91	70.742	ENSMMOG00000008209	cpeb3	88	71.098	Mola_mola
ENSRNOG00000020689	Cpeb3	66	93.825	ENSMODG00000006673	CPEB3	100	83.400	Monodelphis_domestica
ENSRNOG00000020689	Cpeb3	94	69.608	ENSMALG00000009305	cpeb3	98	85.610	Monopterus_albus
ENSRNOG00000020689	Cpeb3	94	97.609	MGP_CAROLIEiJ_G0022910	Cpeb3	100	97.609	Mus_caroli
ENSRNOG00000020689	Cpeb3	94	96.901	ENSMUSG00000039652	Cpeb3	100	96.901	Mus_musculus
ENSRNOG00000020689	Cpeb3	94	97.187	MGP_PahariEiJ_G0014405	Cpeb3	100	97.187	Mus_pahari
ENSRNOG00000020689	Cpeb3	94	97.465	MGP_SPRETEiJ_G0023829	Cpeb3	100	97.465	Mus_spretus
ENSRNOG00000020689	Cpeb3	94	95.225	ENSMPUG00000017227	CPEB3	100	95.225	Mustela_putorius_furo
ENSRNOG00000020689	Cpeb3	94	90.723	ENSNGAG00000015621	Cpeb3	100	90.996	Nannospalax_galili
ENSRNOG00000020689	Cpeb3	95	70.278	ENSNBRG00000018343	cpeb3	92	70.994	Neolamprologus_brichardi
ENSRNOG00000020689	Cpeb3	94	93.689	ENSNLEG00000012600	CPEB3	100	93.689	Nomascus_leucogenys
ENSRNOG00000020689	Cpeb3	71	87.328	ENSMEUG00000009948	-	75	87.328	Notamacropus_eugenii
ENSRNOG00000020689	Cpeb3	94	94.005	ENSODEG00000004591	CPEB3	100	94.005	Octodon_degus
ENSRNOG00000020689	Cpeb3	94	91.293	ENSOCUG00000010454	CPEB3	100	91.156	Oryctolagus_cuniculus
ENSRNOG00000020689	Cpeb3	94	69.014	ENSORLG00000000726	cpeb3	100	69.242	Oryzias_latipes
ENSRNOG00000020689	Cpeb3	94	69.859	ENSORLG00020004475	cpeb3	100	70.927	Oryzias_latipes_hni
ENSRNOG00000020689	Cpeb3	94	70.000	ENSORLG00015011683	cpeb3	100	71.067	Oryzias_latipes_hsok
ENSRNOG00000020689	Cpeb3	94	70.629	ENSOMEG00000018265	cpeb3	93	70.236	Oryzias_melastigma
ENSRNOG00000020689	Cpeb3	94	90.377	ENSOGAG00000002002	CPEB3	100	91.771	Otolemur_garnettii
ENSRNOG00000020689	Cpeb3	94	94.093	ENSOARG00000016671	CPEB3	100	94.093	Ovis_aries
ENSRNOG00000020689	Cpeb3	81	91.451	ENSPPAG00000031528	CPEB3	100	89.922	Pan_paniscus
ENSRNOG00000020689	Cpeb3	94	94.093	ENSPPRG00000015654	CPEB3	100	94.093	Panthera_pardus
ENSRNOG00000020689	Cpeb3	57	90.487	ENSPTIG00000012018	CPEB3	97	99.310	Panthera_tigris_altaica
ENSRNOG00000020689	Cpeb3	94	89.145	ENSPTRG00000002753	CPEB3	100	89.552	Pan_troglodytes
ENSRNOG00000020689	Cpeb3	94	86.685	ENSPANG00000021561	CPEB3	100	87.092	Papio_anubis
ENSRNOG00000020689	Cpeb3	94	75.877	ENSPKIG00000015878	cpeb3	100	75.456	Paramormyrops_kingsleyae
ENSRNOG00000020689	Cpeb3	82	67.829	ENSPMGG00000022722	cpeb3	97	66.168	Periophthalmus_magnuspinnatus
ENSRNOG00000020689	Cpeb3	94	97.328	ENSPEMG00000008448	Cpeb3	100	97.328	Peromyscus_maniculatus_bairdii
ENSRNOG00000020689	Cpeb3	66	89.524	ENSPCIG00000017302	CPEB3	100	81.651	Phascolarctos_cinereus
ENSRNOG00000020689	Cpeb3	94	70.042	ENSPFOG00000011231	cpeb3	96	74.109	Poecilia_formosa
ENSRNOG00000020689	Cpeb3	94	67.350	ENSPLAG00000002852	cpeb3	100	68.071	Poecilia_latipinna
ENSRNOG00000020689	Cpeb3	94	68.579	ENSPMEG00000021572	cpeb3	100	68.886	Poecilia_mexicana
ENSRNOG00000020689	Cpeb3	94	68.989	ENSPREG00000003085	cpeb3	100	68.970	Poecilia_reticulata
ENSRNOG00000020689	Cpeb3	94	89.201	ENSPPYG00000002481	CPEB3	100	89.201	Pongo_abelii
ENSRNOG00000020689	Cpeb3	94	83.154	ENSPCAG00000012417	CPEB3	100	83.693	Procavia_capensis
ENSRNOG00000020689	Cpeb3	94	91.417	ENSPCOG00000023690	CPEB3	100	92.469	Propithecus_coquereli
ENSRNOG00000020689	Cpeb3	76	88.158	ENSPVAG00000007664	CPEB3	80	88.158	Pteropus_vampyrus
ENSRNOG00000020689	Cpeb3	95	70.000	ENSPNYG00000005300	cpeb3	100	70.771	Pundamilia_nyererei
ENSRNOG00000020689	Cpeb3	95	72.289	ENSPNAG00000012111	cpeb3	100	72.418	Pygocentrus_nattereri
ENSRNOG00000020689	Cpeb3	94	89.674	ENSRBIG00000041079	CPEB3	100	90.082	Rhinopithecus_bieti
ENSRNOG00000020689	Cpeb3	94	91.304	ENSRROG00000031558	CPEB3	100	91.585	Rhinopithecus_roxellana
ENSRNOG00000020689	Cpeb3	57	95.592	ENSSBOG00000035843	CPEB3	100	95.592	Saimiri_boliviensis_boliviensis
ENSRNOG00000020689	Cpeb3	95	72.466	ENSSFOG00015004974	cpeb3	100	72.576	Scleropages_formosus
ENSRNOG00000020689	Cpeb3	55	79.236	ENSSFOG00015018275	-	99	79.327	Scleropages_formosus
ENSRNOG00000020689	Cpeb3	94	72.958	ENSSMAG00000013924	cpeb3	100	73.558	Scophthalmus_maximus
ENSRNOG00000020689	Cpeb3	95	70.685	ENSSDUG00000019766	cpeb3	100	71.905	Seriola_dumerili
ENSRNOG00000020689	Cpeb3	94	71.429	ENSSLDG00000021438	cpeb3	100	71.888	Seriola_lalandi_dorsalis
ENSRNOG00000020689	Cpeb3	94	70.867	ENSSPAG00000004725	cpeb3	100	71.816	Stegastes_partitus
ENSRNOG00000020689	Cpeb3	94	95.218	ENSSSCG00000010468	CPEB3	100	95.218	Sus_scrofa
ENSRNOG00000020689	Cpeb3	94	81.497	ENSTGUG00000008988	CPEB3	100	80.952	Taeniopygia_guttata
ENSRNOG00000020689	Cpeb3	54	83.141	ENSTBEG00000013125	-	60	83.141	Tupaia_belangeri
ENSRNOG00000020689	Cpeb3	94	86.957	ENSTTRG00000012334	CPEB3	100	87.228	Tursiops_truncatus
ENSRNOG00000020689	Cpeb3	94	89.632	ENSUAMG00000010827	CPEB3	100	89.632	Ursus_americanus
ENSRNOG00000020689	Cpeb3	94	95.359	ENSVVUG00000021375	CPEB3	100	95.359	Vulpes_vulpes
ENSRNOG00000020689	Cpeb3	82	82.616	ENSXETG00000012190	cpeb3	99	74.931	Xenopus_tropicalis
ENSRNOG00000020689	Cpeb3	94	68.917	ENSXCOG00000006122	cpeb3	100	69.144	Xiphophorus_couchianus
ENSRNOG00000020689	Cpeb3	94	68.073	ENSXMAG00000007652	cpeb3	94	93.493	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000900	translation repressor activity, mRNA regulatory element binding	21873635.	IBA	Function
GO:0000900	translation repressor activity, mRNA regulatory element binding	-	ISO	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	22711986.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	22711986.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0007616	long-term memory	-	ISO	Process
GO:0008135	translation factor activity, RNA binding	21873635.	IBA	Function
GO:0008135	translation factor activity, RNA binding	-	ISO	Function
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0030014	CCR4-NOT complex	-	IEA	Component
GO:0030014	CCR4-NOT complex	-	ISO	Component
GO:0030425	dendrite	22711986.	IDA	Component
GO:0030425	dendrite	-	ISO	Component
GO:0035613	RNA stem-loop binding	-	ISO	Function
GO:0035925	mRNA 3'-UTR AU-rich region binding	-	ISO	Function
GO:0043005	neuron projection	21873635.	IBA	Component
GO:0043005	neuron projection	-	ISO	Component
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0045202	synapse	21873635.	IBA	Component
GO:0045202	synapse	-	ISO	Component
GO:0045727	positive regulation of translation	-	ISO	Process
GO:0048167	regulation of synaptic plasticity	-	ISO	Process
GO:0050955	thermoception	-	ISO	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	IEA	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	ISO	Process
GO:0060998	regulation of dendritic spine development	-	ISO	Process
GO:0060999	positive regulation of dendritic spine development	-	ISO	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	IEA	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	ISO	Process
GO:0071230	cellular response to amino acid stimulus	-	IEA	Process
GO:0071230	cellular response to amino acid stimulus	-	ISO	Process
GO:0097440	apical dendrite	-	ISO	Component
GO:0098794	postsynapse	17024188.	EXP	Component
GO:0098794	postsynapse	17024188.	IDA	Component
GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	ISO	Process
GO:1900248	negative regulation of cytoplasmic translational elongation	-	ISO	Process
GO:1900273	positive regulation of long-term synaptic potentiation	-	ISO	Process
GO:1900365	positive regulation of mRNA polyadenylation	-	ISO	Process
GO:1990124	messenger ribonucleoprotein complex	21873635.	IBA	Component
GO:2000766	negative regulation of cytoplasmic translation	21873635.	IBA	Process