EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020700 (Gene tree)
Gene ID: 100361939
Gene Symbol: Rnaseh2c
Alias: LOC100361939
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1171 bases
Position: chr1:220966655-220967825
Accession: 2319141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028097	RNase_H2_suC	PF08615.11	9.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028097	-	729	XM_002728856	ENSRNOP00000028097	166 (aa)	XP_002728902	D4A434

Gene Model

Click here to download ENSRNOG00000020700's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020700	Rnaseh2c	100	65.663	ENSG00000172922	RNASEH2C	100	65.663	Homo_sapiens
ENSRNOG00000020700	Rnaseh2c	100	67.442	ENSAMEG00000017348	RNASEH2C	100	67.442	Ailuropoda_melanoleuca
ENSRNOG00000020700	Rnaseh2c	100	68.072	ENSANAG00000032535	RNASEH2C	100	68.072	Aotus_nancymaae
ENSRNOG00000020700	Rnaseh2c	100	65.060	ENSBTAG00000005577	RNASEH2C	100	65.060	Bos_taurus
ENSRNOG00000020700	Rnaseh2c	100	66.867	ENSCJAG00000001965	RNASEH2C	100	66.867	Callithrix_jacchus
ENSRNOG00000020700	Rnaseh2c	100	67.262	ENSCAFG00000013292	RNASEH2C	100	67.262	Canis_familiaris
ENSRNOG00000020700	Rnaseh2c	100	67.262	ENSCAFG00020015077	RNASEH2C	100	67.262	Canis_lupus_dingo
ENSRNOG00000020700	Rnaseh2c	100	65.060	ENSCHIG00000013681	RNASEH2C	100	65.060	Capra_hircus
ENSRNOG00000020700	Rnaseh2c	65	72.222	ENSTSYG00000028658	-	65	72.222	Carlito_syrichta
ENSRNOG00000020700	Rnaseh2c	100	66.265	ENSCPOG00000013696	RNASEH2C	100	66.265	Cavia_porcellus
ENSRNOG00000020700	Rnaseh2c	100	67.470	ENSCCAG00000025461	RNASEH2C	100	67.470	Cebus_capucinus
ENSRNOG00000020700	Rnaseh2c	99	70.732	ENSCLAG00000016534	RNASEH2C	99	72.727	Chinchilla_lanigera
ENSRNOG00000020700	Rnaseh2c	100	66.867	ENSCSAG00000007985	RNASEH2C	100	66.867	Chlorocebus_sabaeus
ENSRNOG00000020700	Rnaseh2c	100	65.663	ENSCANG00000039373	RNASEH2C	100	65.663	Colobus_angolensis_palliatus
ENSRNOG00000020700	Rnaseh2c	100	87.952	ENSCGRG00001015383	Rnaseh2c	100	87.952	Cricetulus_griseus_chok1gshd
ENSRNOG00000020700	Rnaseh2c	100	87.952	ENSCGRG00000012179	Rnaseh2c	100	87.952	Cricetulus_griseus_crigri
ENSRNOG00000020700	Rnaseh2c	100	66.864	ENSDNOG00000035155	RNASEH2C	99	68.047	Dasypus_novemcinctus
ENSRNOG00000020700	Rnaseh2c	94	75.000	ENSDORG00000023624	Rnaseh2c	94	75.000	Dipodomys_ordii
ENSRNOG00000020700	Rnaseh2c	75	64.062	ENSETEG00000020048	-	100	64.062	Echinops_telfairi
ENSRNOG00000020700	Rnaseh2c	60	57.282	ENSETEG00000015293	-	97	57.282	Echinops_telfairi
ENSRNOG00000020700	Rnaseh2c	100	63.855	ENSEASG00005004302	RNASEH2C	100	63.855	Equus_asinus_asinus
ENSRNOG00000020700	Rnaseh2c	100	64.458	ENSECAG00000017289	RNASEH2C	100	64.458	Equus_caballus
ENSRNOG00000020700	Rnaseh2c	100	71.687	ENSFCAG00000044095	RNASEH2C	100	71.687	Felis_catus
ENSRNOG00000020700	Rnaseh2c	97	61.404	ENSFDAG00000011974	RNASEH2C	97	61.404	Fukomys_damarensis
ENSRNOG00000020700	Rnaseh2c	100	68.675	ENSHGLG00000013478	RNASEH2C	100	68.675	Heterocephalus_glaber_female
ENSRNOG00000020700	Rnaseh2c	100	68.675	ENSHGLG00100019352	RNASEH2C	100	68.675	Heterocephalus_glaber_male
ENSRNOG00000020700	Rnaseh2c	100	70.520	ENSSTOG00000019410	RNASEH2C	100	70.520	Ictidomys_tridecemlineatus
ENSRNOG00000020700	Rnaseh2c	95	78.344	ENSJJAG00000019320	Rnaseh2c	95	78.344	Jaculus_jaculus
ENSRNOG00000020700	Rnaseh2c	100	63.314	ENSLAFG00000015641	RNASEH2C	100	63.314	Loxodonta_africana
ENSRNOG00000020700	Rnaseh2c	100	65.663	ENSMFAG00000042754	-	100	65.663	Macaca_fascicularis
ENSRNOG00000020700	Rnaseh2c	100	66.867	ENSMFAG00000038096	-	100	66.867	Macaca_fascicularis
ENSRNOG00000020700	Rnaseh2c	100	66.867	ENSMMUG00000016234	-	100	66.867	Macaca_mulatta
ENSRNOG00000020700	Rnaseh2c	98	63.804	ENSMMUG00000019837	RNASEH2C	74	63.804	Macaca_mulatta
ENSRNOG00000020700	Rnaseh2c	100	66.867	ENSMNEG00000040939	RNASEH2C	100	66.867	Macaca_nemestrina
ENSRNOG00000020700	Rnaseh2c	100	89.759	ENSMAUG00000016346	Rnaseh2c	100	89.759	Mesocricetus_auratus
ENSRNOG00000020700	Rnaseh2c	100	70.060	ENSMICG00000008882	RNASEH2C	100	70.060	Microcebus_murinus
ENSRNOG00000020700	Rnaseh2c	100	85.542	ENSMOCG00000013231	Rnaseh2c	100	85.542	Microtus_ochrogaster
ENSRNOG00000020700	Rnaseh2c	90	50.000	ENSMODG00000009547	-	90	50.000	Monodelphis_domestica
ENSRNOG00000020700	Rnaseh2c	100	92.771	MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	94.186	Mus_caroli
ENSRNOG00000020700	Rnaseh2c	100	95.181	ENSMUSG00000024925	Rnaseh2c	98	97.674	Mus_musculus
ENSRNOG00000020700	Rnaseh2c	100	93.976	MGP_PahariEiJ_G0014057	Rnaseh2c	100	93.976	Mus_pahari
ENSRNOG00000020700	Rnaseh2c	100	63.006	ENSMPUG00000011629	RNASEH2C	100	64.740	Mustela_putorius_furo
ENSRNOG00000020700	Rnaseh2c	100	62.722	ENSMLUG00000008777	RNASEH2C	100	62.722	Myotis_lucifugus
ENSRNOG00000020700	Rnaseh2c	100	64.458	ENSNGAG00000020391	Rnaseh2c	100	64.458	Nannospalax_galili
ENSRNOG00000020700	Rnaseh2c	100	65.060	ENSNLEG00000005833	-	100	65.060	Nomascus_leucogenys
ENSRNOG00000020700	Rnaseh2c	92	45.098	ENSMEUG00000006205	-	93	45.098	Notamacropus_eugenii
ENSRNOG00000020700	Rnaseh2c	100	68.072	ENSODEG00000017806	RNASEH2C	100	68.072	Octodon_degus
ENSRNOG00000020700	Rnaseh2c	100	68.786	ENSOGAG00000014128	RNASEH2C	100	68.786	Otolemur_garnettii
ENSRNOG00000020700	Rnaseh2c	100	64.458	ENSOARG00000017675	RNASEH2C	100	64.458	Ovis_aries
ENSRNOG00000020700	Rnaseh2c	100	62.874	ENSPPAG00000042592	-	84	62.874	Pan_paniscus
ENSRNOG00000020700	Rnaseh2c	100	71.084	ENSPPRG00000000774	RNASEH2C	100	71.084	Panthera_pardus
ENSRNOG00000020700	Rnaseh2c	100	68.675	ENSPTIG00000011677	RNASEH2C	100	68.675	Panthera_tigris_altaica
ENSRNOG00000020700	Rnaseh2c	100	66.265	ENSPTRG00000038742	RNASEH2C	100	66.265	Pan_troglodytes
ENSRNOG00000020700	Rnaseh2c	99	63.636	ENSPANG00000015965	RNASEH2C	66	63.636	Papio_anubis
ENSRNOG00000020700	Rnaseh2c	100	89.157	ENSPEMG00000018577	Rnaseh2c	100	89.157	Peromyscus_maniculatus_bairdii
ENSRNOG00000020700	Rnaseh2c	100	65.060	ENSPPYG00000003051	RNASEH2C	100	65.060	Pongo_abelii
ENSRNOG00000020700	Rnaseh2c	100	61.047	ENSPCAG00000007887	RNASEH2C	100	61.047	Procavia_capensis
ENSRNOG00000020700	Rnaseh2c	100	69.461	ENSPCOG00000021092	RNASEH2C	100	69.461	Propithecus_coquereli
ENSRNOG00000020700	Rnaseh2c	100	68.675	ENSPVAG00000016950	RNASEH2C	100	68.675	Pteropus_vampyrus
ENSRNOG00000020700	Rnaseh2c	96	65.409	ENSRBIG00000040124	RNASEH2C	64	65.409	Rhinopithecus_bieti
ENSRNOG00000020700	Rnaseh2c	96	65.409	ENSRROG00000044910	RNASEH2C	99	65.823	Rhinopithecus_roxellana
ENSRNOG00000020700	Rnaseh2c	100	68.072	ENSSBOG00000034781	RNASEH2C	100	68.072	Saimiri_boliviensis_boliviensis
ENSRNOG00000020700	Rnaseh2c	100	66.071	ENSSSCG00000012979	RNASEH2C	100	66.071	Sus_scrofa
ENSRNOG00000020700	Rnaseh2c	95	50.955	ENSTTRG00000016928	RNASEH2C	95	50.955	Tursiops_truncatus
ENSRNOG00000020700	Rnaseh2c	100	67.442	ENSUAMG00000020793	RNASEH2C	100	67.442	Ursus_americanus
ENSRNOG00000020700	Rnaseh2c	100	66.860	ENSUMAG00000010791	RNASEH2C	100	66.860	Ursus_maritimus
ENSRNOG00000020700	Rnaseh2c	90	62.416	ENSVPAG00000006579	RNASEH2C	97	62.416	Vicugna_pacos
ENSRNOG00000020700	Rnaseh2c	96	63.354	ENSVVUG00000027076	RNASEH2C	77	63.354	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006401	RNA catabolic process	-	IEA	Process
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0032299	ribonuclease H2 complex	-	IEA	Component
GO:0032299	ribonuclease H2 complex	-	ISO	Component