EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020710 (Gene tree)
Gene ID: 298705
Gene Symbol: Raver1
Alias: LOC298705|Raver1h
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 19770 bases
Position: chr8:22092094-22111863
Accession: 1359190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000048510	RRM_1	PF00076.22	1.4e-28	1	3
ENSRNOP00000048510	RRM_1	PF00076.22	1.4e-28	2	3
ENSRNOP00000048510	RRM_1	PF00076.22	1.4e-28	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000046983	-	3445	-	ENSRNOP00000048510	748 (aa)	-	Q5XI28

Gene Model

Click here to download ENSRNOG00000020710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000020710	Raver1	67	43.594	ENSRNOG00000023812	Raver2	52	55.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020710	Raver1	100	87.968	ENSG00000161847	RAVER1	100	87.968	Homo_sapiens
ENSRNOG00000020710	Raver1	97	50.339	ENSAPOG00000017267	raver1	84	48.974	Acanthochromis_polyacanthus
ENSRNOG00000020710	Raver1	100	87.299	ENSAMEG00000011738	RAVER1	98	86.765	Ailuropoda_melanoleuca
ENSRNOG00000020710	Raver1	97	49.863	ENSAOCG00000005128	raver1	88	48.579	Amphiprion_ocellaris
ENSRNOG00000020710	Raver1	78	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
ENSRNOG00000020710	Raver1	97	50.744	ENSATEG00000021004	raver1	91	48.991	Anabas_testudineus
ENSRNOG00000020710	Raver1	84	59.385	ENSACAG00000008386	-	91	59.248	Anolis_carolinensis
ENSRNOG00000020710	Raver1	100	87.299	ENSANAG00000028226	RAVER1	98	87.701	Aotus_nancymaae
ENSRNOG00000020710	Raver1	68	58.171	ENSACLG00000018492	raver1	91	49.593	Astatotilapia_calliptera
ENSRNOG00000020710	Raver1	76	80.000	ENSAMXG00000005132	raver1	93	50.472	Astyanax_mexicanus
ENSRNOG00000020710	Raver1	100	86.497	ENSBTAG00000015721	RAVER1	97	94.286	Bos_taurus
ENSRNOG00000020710	Raver1	100	87.299	ENSCJAG00000005671	RAVER1	98	87.701	Callithrix_jacchus
ENSRNOG00000020710	Raver1	100	86.497	ENSCAFG00000017861	RAVER1	98	86.364	Canis_familiaris
ENSRNOG00000020710	Raver1	100	86.497	ENSCAFG00020024449	RAVER1	100	86.364	Canis_lupus_dingo
ENSRNOG00000020710	Raver1	100	85.963	ENSCHIG00000006718	RAVER1	100	85.829	Capra_hircus
ENSRNOG00000020710	Raver1	91	82.602	ENSTSYG00000027107	RAVER1	100	82.456	Carlito_syrichta
ENSRNOG00000020710	Raver1	90	85.926	ENSCAPG00000002269	RAVER1	100	86.815	Cavia_aperea
ENSRNOG00000020710	Raver1	100	87.834	ENSCPOG00000001008	RAVER1	100	88.636	Cavia_porcellus
ENSRNOG00000020710	Raver1	100	87.701	ENSCCAG00000031723	RAVER1	98	87.701	Cebus_capucinus
ENSRNOG00000020710	Raver1	100	88.369	ENSCATG00000043863	RAVER1	98	88.369	Cercocebus_atys
ENSRNOG00000020710	Raver1	100	88.785	ENSCLAG00000009336	RAVER1	100	88.518	Chinchilla_lanigera
ENSRNOG00000020710	Raver1	100	88.503	ENSCSAG00000007317	RAVER1	84	88.503	Chlorocebus_sabaeus
ENSRNOG00000020710	Raver1	96	63.117	ENSCPBG00000005349	-	96	61.568	Chrysemys_picta_bellii
ENSRNOG00000020710	Raver1	100	88.636	ENSCANG00000008337	RAVER1	98	88.636	Colobus_angolensis_palliatus
ENSRNOG00000020710	Raver1	100	96.257	ENSCGRG00001013260	-	100	96.257	Cricetulus_griseus_chok1gshd
ENSRNOG00000020710	Raver1	100	96.257	ENSCGRG00000015138	-	100	96.257	Cricetulus_griseus_crigri
ENSRNOG00000020710	Raver1	96	48.916	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
ENSRNOG00000020710	Raver1	100	48.774	ENSCVAG00000013971	raver1	91	48.400	Cyprinodon_variegatus
ENSRNOG00000020710	Raver1	100	80.523	ENSDORG00000010106	-	100	79.608	Dipodomys_ordii
ENSRNOG00000020710	Raver1	67	73.171	ENSETEG00000008201	-	74	86.935	Echinops_telfairi
ENSRNOG00000020710	Raver1	66	91.687	ENSEASG00005010544	-	93	87.699	Equus_asinus_asinus
ENSRNOG00000020710	Raver1	100	89.439	ENSECAG00000024966	RAVER1	98	88.904	Equus_caballus
ENSRNOG00000020710	Raver1	100	88.636	ENSFCAG00000009435	RAVER1	98	88.102	Felis_catus
ENSRNOG00000020710	Raver1	100	88.385	ENSFDAG00000015113	RAVER1	100	88.385	Fukomys_damarensis
ENSRNOG00000020710	Raver1	98	51.210	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
ENSRNOG00000020710	Raver1	66	44.356	ENSGALG00000050608	-	52	44.048	Gallus_gallus
ENSRNOG00000020710	Raver1	100	51.245	ENSGAFG00000015944	raver1	91	50.409	Gambusia_affinis
ENSRNOG00000020710	Raver1	96	62.517	ENSGAGG00000011748	-	95	78.090	Gopherus_agassizii
ENSRNOG00000020710	Raver1	100	87.701	ENSGGOG00000006015	RAVER1	98	87.701	Gorilla_gorilla
ENSRNOG00000020710	Raver1	68	58.171	ENSHBUG00000021210	raver1	91	49.932	Haplochromis_burtoni
ENSRNOG00000020710	Raver1	100	88.117	ENSHGLG00000015460	RAVER1	100	87.583	Heterocephalus_glaber_female
ENSRNOG00000020710	Raver1	100	88.117	ENSHGLG00100000812	RAVER1	100	87.583	Heterocephalus_glaber_male
ENSRNOG00000020710	Raver1	98	49.866	ENSHCOG00000000449	raver1	89	50.205	Hippocampus_comes
ENSRNOG00000020710	Raver1	96	52.322	ENSIPUG00000013153	raver1	81	60.784	Ictalurus_punctatus
ENSRNOG00000020710	Raver1	100	89.572	ENSSTOG00000003241	RAVER1	100	89.037	Ictidomys_tridecemlineatus
ENSRNOG00000020710	Raver1	100	90.654	ENSJJAG00000018219	-	100	90.120	Jaculus_jaculus
ENSRNOG00000020710	Raver1	97	50.809	ENSKMAG00000017355	raver1	66	56.250	Kryptolebias_marmoratus
ENSRNOG00000020710	Raver1	89	49.632	ENSLBEG00000008268	raver1	68	56.582	Labrus_bergylta
ENSRNOG00000020710	Raver1	90	60.628	ENSLACG00000005809	-	99	60.907	Latimeria_chalumnae
ENSRNOG00000020710	Raver1	96	56.233	ENSLOCG00000007500	raver1	92	54.122	Lepisosteus_oculatus
ENSRNOG00000020710	Raver1	100	87.984	ENSLAFG00000003664	-	100	87.717	Loxodonta_africana
ENSRNOG00000020710	Raver1	100	88.235	ENSMFAG00000037977	RAVER1	98	88.235	Macaca_fascicularis
ENSRNOG00000020710	Raver1	100	88.235	ENSMMUG00000014897	RAVER1	98	88.235	Macaca_mulatta
ENSRNOG00000020710	Raver1	100	88.235	ENSMNEG00000028390	RAVER1	98	88.235	Macaca_nemestrina
ENSRNOG00000020710	Raver1	100	88.235	ENSMLEG00000041959	RAVER1	98	88.235	Mandrillus_leucophaeus
ENSRNOG00000020710	Raver1	97	50.265	ENSMAMG00000012059	raver1	91	49.187	Mastacembelus_armatus
ENSRNOG00000020710	Raver1	68	58.171	ENSMZEG00005019002	raver1	91	50.340	Maylandia_zebra
ENSRNOG00000020710	Raver1	100	95.588	ENSMAUG00000017948	-	100	95.588	Mesocricetus_auratus
ENSRNOG00000020710	Raver1	99	86.078	ENSMICG00000010326	RAVER1	99	85.542	Microcebus_murinus
ENSRNOG00000020710	Raver1	100	96.123	ENSMOCG00000015553	-	100	96.123	Microtus_ochrogaster
ENSRNOG00000020710	Raver1	99	50.806	ENSMMOG00000012093	raver1	69	55.133	Mola_mola
ENSRNOG00000020710	Raver1	97	74.658	ENSMODG00000005584	-	89	74.384	Monodelphis_domestica
ENSRNOG00000020710	Raver1	99	50.066	ENSMALG00000016569	raver1	66	56.725	Monopterus_albus
ENSRNOG00000020710	Raver1	100	96.390	MGP_CAROLIEiJ_G0031860	-	100	96.390	Mus_caroli
ENSRNOG00000020710	Raver1	100	96.658	ENSMUSG00000010205	Raver1	100	96.658	Mus_musculus
ENSRNOG00000020710	Raver1	100	96.410	MGP_PahariEiJ_G0014726	-	100	96.410	Mus_pahari
ENSRNOG00000020710	Raver1	100	96.524	MGP_SPRETEiJ_G0032984	-	100	96.524	Mus_spretus
ENSRNOG00000020710	Raver1	100	88.102	ENSMPUG00000006712	RAVER1	98	87.701	Mustela_putorius_furo
ENSRNOG00000020710	Raver1	100	85.428	ENSMLUG00000012328	RAVER1	100	85.428	Myotis_lucifugus
ENSRNOG00000020710	Raver1	100	90.387	ENSNGAG00000001260	-	100	90.254	Nannospalax_galili
ENSRNOG00000020710	Raver1	68	49.035	ENSNBRG00000010139	raver1	65	50.099	Neolamprologus_brichardi
ENSRNOG00000020710	Raver1	100	88.102	ENSNLEG00000012181	RAVER1	98	88.102	Nomascus_leucogenys
ENSRNOG00000020710	Raver1	90	73.460	ENSMEUG00000003281	-	100	72.727	Notamacropus_eugenii
ENSRNOG00000020710	Raver1	100	88.385	ENSODEG00000016260	RAVER1	100	88.117	Octodon_degus
ENSRNOG00000020710	Raver1	97	48.988	ENSONIG00000001559	raver1	99	50.340	Oreochromis_niloticus
ENSRNOG00000020710	Raver1	100	81.417	ENSOCUG00000020918	RAVER1	100	80.481	Oryctolagus_cuniculus
ENSRNOG00000020710	Raver1	99	49.014	ENSORLG00000005458	raver1	67	64.925	Oryzias_latipes
ENSRNOG00000020710	Raver1	99	48.831	ENSORLG00020004392	raver1	67	64.677	Oryzias_latipes_hni
ENSRNOG00000020710	Raver1	99	49.020	ENSORLG00015017222	raver1	67	64.428	Oryzias_latipes_hsok
ENSRNOG00000020710	Raver1	74	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSRNOG00000020710	Raver1	100	87.701	ENSOGAG00000011071	RAVER1	98	87.166	Otolemur_garnettii
ENSRNOG00000020710	Raver1	100	84.358	ENSOARG00000015886	RAVER1	98	84.225	Ovis_aries
ENSRNOG00000020710	Raver1	100	87.968	ENSPPAG00000002611	RAVER1	98	87.968	Pan_paniscus
ENSRNOG00000020710	Raver1	100	89.037	ENSPPRG00000009912	RAVER1	98	88.503	Panthera_pardus
ENSRNOG00000020710	Raver1	100	87.968	ENSPTRG00000010466	RAVER1	98	87.968	Pan_troglodytes
ENSRNOG00000020710	Raver1	100	88.235	ENSPANG00000004122	RAVER1	98	88.235	Papio_anubis
ENSRNOG00000020710	Raver1	100	95.861	ENSPEMG00000016411	-	100	95.861	Peromyscus_maniculatus_bairdii
ENSRNOG00000020710	Raver1	100	75.762	ENSPCIG00000018695	-	99	79.605	Phascolarctos_cinereus
ENSRNOG00000020710	Raver1	100	51.890	ENSPFOG00000007016	raver1	91	51.413	Poecilia_formosa
ENSRNOG00000020710	Raver1	100	49.673	ENSPLAG00000020793	raver1	79	57.002	Poecilia_latipinna
ENSRNOG00000020710	Raver1	99	51.862	ENSPMEG00000011220	raver1	91	51.150	Poecilia_mexicana
ENSRNOG00000020710	Raver1	74	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
ENSRNOG00000020710	Raver1	100	87.567	ENSPPYG00000010514	RAVER1	84	87.567	Pongo_abelii
ENSRNOG00000020710	Raver1	100	87.733	ENSPCOG00000026605	RAVER1	98	87.600	Propithecus_coquereli
ENSRNOG00000020710	Raver1	100	87.299	ENSPVAG00000003689	RAVER1	100	87.032	Pteropus_vampyrus
ENSRNOG00000020710	Raver1	64	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
ENSRNOG00000020710	Raver1	98	51.067	ENSPNAG00000015476	raver1	91	50.951	Pygocentrus_nattereri
ENSRNOG00000020710	Raver1	100	87.567	ENSRBIG00000034702	RAVER1	98	88.235	Rhinopithecus_bieti
ENSRNOG00000020710	Raver1	100	85.963	ENSRROG00000031186	RAVER1	98	85.963	Rhinopithecus_roxellana
ENSRNOG00000020710	Raver1	100	85.160	ENSSBOG00000023423	RAVER1	98	85.160	Saimiri_boliviensis_boliviensis
ENSRNOG00000020710	Raver1	90	74.671	ENSSHAG00000008181	-	90	74.231	Sarcophilus_harrisii
ENSRNOG00000020710	Raver1	98	50.863	ENSSDUG00000021063	raver1	92	49.349	Seriola_dumerili
ENSRNOG00000020710	Raver1	98	50.598	ENSSLDG00000014505	raver1	66	56.751	Seriola_lalandi_dorsalis
ENSRNOG00000020710	Raver1	97	51.436	ENSSPAG00000000688	raver1	91	50.336	Stegastes_partitus
ENSRNOG00000020710	Raver1	100	88.770	ENSSSCG00000013650	-	98	88.770	Sus_scrofa
ENSRNOG00000020710	Raver1	97	50.471	ENSTRUG00000025641	raver1	91	50.000	Takifugu_rubripes
ENSRNOG00000020710	Raver1	100	87.433	ENSTTRG00000009552	RAVER1	100	87.834	Tursiops_truncatus
ENSRNOG00000020710	Raver1	100	88.904	ENSUAMG00000020385	RAVER1	98	88.369	Ursus_americanus
ENSRNOG00000020710	Raver1	100	86.497	ENSVVUG00000028976	RAVER1	98	86.364	Vulpes_vulpes
ENSRNOG00000020710	Raver1	98	55.034	ENSXETG00000011622	raver1	89	66.667	Xenopus_tropicalis
ENSRNOG00000020710	Raver1	99	51.798	ENSXCOG00000016368	raver1	91	50.272	Xiphophorus_couchianus
ENSRNOG00000020710	Raver1	99	51.531	ENSXMAG00000000217	raver1	91	50.272	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component