EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020751 (Gene tree)
Gene ID: 287726
Gene Symbol: Rdm1
Alias: LOC287726|Rad52b
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 10945 bases
Position: chr10:89539556-89550500
Accession: 1310432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028174	RRM_1	PF00076.22	3.2e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028174	-	1905	-	ENSRNOP00000028174	281 (aa)	-	D4A823

Gene Model

Click here to download ENSRNOG00000020751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020751	Rdm1	99	71.786	ENSG00000278023	RDM1	97	81.955	Homo_sapiens
ENSRNOG00000020751	Rdm1	88	33.202	ENSAPEG00000008929	zgc:103564	93	33.202	Amphiprion_percula
ENSRNOG00000020751	Rdm1	86	54.286	ENSAPLG00000004384	RDM1	94	54.286	Anas_platyrhynchos
ENSRNOG00000020751	Rdm1	97	45.714	ENSACAG00000012989	-	100	45.357	Anolis_carolinensis
ENSRNOG00000020751	Rdm1	99	72.143	ENSANAG00000032752	RDM1	96	81.203	Aotus_nancymaae
ENSRNOG00000020751	Rdm1	99	70.463	ENSBTAG00000000030	RDM1	99	70.463	Bos_taurus
ENSRNOG00000020751	Rdm1	89	74.603	ENSCJAG00000015031	RDM1	96	83.459	Callithrix_jacchus
ENSRNOG00000020751	Rdm1	88	64.844	ENSCAFG00000015160	-	100	64.844	Canis_familiaris
ENSRNOG00000020751	Rdm1	99	71.530	ENSCHIG00000020607	RDM1	99	71.530	Capra_hircus
ENSRNOG00000020751	Rdm1	99	68.571	ENSCPOG00000001495	-	97	68.571	Cavia_porcellus
ENSRNOG00000020751	Rdm1	96	72.059	ENSCCAG00000035763	RDM1	96	81.955	Cebus_capucinus
ENSRNOG00000020751	Rdm1	99	73.571	ENSCATG00000044451	RDM1	96	83.459	Cercocebus_atys
ENSRNOG00000020751	Rdm1	92	71.374	ENSCSAG00000006209	RDM1	98	71.374	Chlorocebus_sabaeus
ENSRNOG00000020751	Rdm1	79	52.632	ENSCPBG00000009105	RDM1	97	50.980	Chrysemys_picta_bellii
ENSRNOG00000020751	Rdm1	99	72.857	ENSCANG00000041322	RDM1	95	79.130	Colobus_angolensis_palliatus
ENSRNOG00000020751	Rdm1	96	83.271	ENSCGRG00001015927	Rdm1	99	83.394	Cricetulus_griseus_chok1gshd
ENSRNOG00000020751	Rdm1	90	33.721	ENSCVAG00000001956	zgc:103564	98	33.700	Cyprinodon_variegatus
ENSRNOG00000020751	Rdm1	87	75.806	ENSDNOG00000045224	-	92	75.806	Dasypus_novemcinctus
ENSRNOG00000020751	Rdm1	70	71.078	ENSEASG00005010554	RDM1	71	71.078	Equus_asinus_asinus
ENSRNOG00000020751	Rdm1	92	72.075	ENSECAG00000022182	RDM1	94	72.075	Equus_caballus
ENSRNOG00000020751	Rdm1	87	69.231	ENSEEUG00000006127	RDM1	98	69.231	Erinaceus_europaeus
ENSRNOG00000020751	Rdm1	80	73.568	ENSFCAG00000043429	RDM1	96	82.707	Felis_catus
ENSRNOG00000020751	Rdm1	97	53.261	ENSGALG00000000243	RDM1	97	53.261	Gallus_gallus
ENSRNOG00000020751	Rdm1	90	51.154	ENSGAGG00000000293	-	82	51.538	Gopherus_agassizii
ENSRNOG00000020751	Rdm1	99	72.500	ENSGGOG00000010584	RDM1	96	81.955	Gorilla_gorilla
ENSRNOG00000020751	Rdm1	88	35.857	ENSHCOG00000002518	-	90	35.857	Hippocampus_comes
ENSRNOG00000020751	Rdm1	98	73.835	ENSSTOG00000022491	RDM1	98	73.835	Ictidomys_tridecemlineatus
ENSRNOG00000020751	Rdm1	99	69.858	ENSLAFG00000029300	RDM1	99	69.858	Loxodonta_africana
ENSRNOG00000020751	Rdm1	99	73.214	ENSMFAG00000032968	RDM1	96	83.459	Macaca_fascicularis
ENSRNOG00000020751	Rdm1	99	73.571	ENSMMUG00000006847	RDM1	95	80.000	Macaca_mulatta
ENSRNOG00000020751	Rdm1	99	73.214	ENSMNEG00000039977	RDM1	96	83.459	Macaca_nemestrina
ENSRNOG00000020751	Rdm1	99	73.571	ENSMLEG00000041158	RDM1	95	80.000	Mandrillus_leucophaeus
ENSRNOG00000020751	Rdm1	91	51.163	ENSMGAG00000008774	RDM1	96	53.306	Meleagris_gallopavo
ENSRNOG00000020751	Rdm1	100	82.562	ENSMAUG00000018559	Rdm1	100	82.562	Mesocricetus_auratus
ENSRNOG00000020751	Rdm1	99	72.438	ENSMICG00000038651	RDM1	99	72.438	Microcebus_murinus
ENSRNOG00000020751	Rdm1	97	79.487	ENSMOCG00000015095	Rdm1	99	79.487	Microtus_ochrogaster
ENSRNOG00000020751	Rdm1	97	60.507	ENSMODG00000011101	RDM1	100	60.507	Monodelphis_domestica
ENSRNOG00000020751	Rdm1	100	92.883	MGP_CAROLIEiJ_G0017226	Rdm1	100	92.883	Mus_caroli
ENSRNOG00000020751	Rdm1	100	92.171	ENSMUSG00000010362	Rdm1	100	92.171	Mus_musculus
ENSRNOG00000020751	Rdm1	100	93.238	MGP_PahariEiJ_G0018356	Rdm1	100	93.238	Mus_pahari
ENSRNOG00000020751	Rdm1	100	92.527	MGP_SPRETEiJ_G0018069	Rdm1	100	92.527	Mus_spretus
ENSRNOG00000020751	Rdm1	98	73.665	ENSMPUG00000008363	RDM1	98	73.665	Mustela_putorius_furo
ENSRNOG00000020751	Rdm1	99	73.571	ENSNLEG00000014173	RDM1	91	82.407	Nomascus_leucogenys
ENSRNOG00000020751	Rdm1	88	61.355	ENSMEUG00000015826	RDM1	100	61.355	Notamacropus_eugenii
ENSRNOG00000020751	Rdm1	89	71.542	ENSOCUG00000022704	RDM1	97	71.542	Oryctolagus_cuniculus
ENSRNOG00000020751	Rdm1	100	70.775	ENSOGAG00000011332	RDM1	100	70.775	Otolemur_garnettii
ENSRNOG00000020751	Rdm1	99	72.857	ENSPPAG00000029969	RDM1	99	72.857	Pan_paniscus
ENSRNOG00000020751	Rdm1	99	73.214	ENSPTRG00000009031	RDM1	96	82.707	Pan_troglodytes
ENSRNOG00000020751	Rdm1	99	73.571	ENSPANG00000022933	RDM1	96	83.459	Papio_anubis
ENSRNOG00000020751	Rdm1	96	83.271	ENSPEMG00000018985	Rdm1	99	82.671	Peromyscus_maniculatus_bairdii
ENSRNOG00000020751	Rdm1	99	71.786	ENSPPYG00000008198	RDM1	99	71.786	Pongo_abelii
ENSRNOG00000020751	Rdm1	99	71.071	ENSPCOG00000017995	RDM1	96	79.699	Propithecus_coquereli
ENSRNOG00000020751	Rdm1	88	72.112	ENSPVAG00000001116	RDM1	100	72.112	Pteropus_vampyrus
ENSRNOG00000020751	Rdm1	99	72.857	ENSRBIG00000030000	RDM1	96	82.707	Rhinopithecus_bieti
ENSRNOG00000020751	Rdm1	99	73.214	ENSRROG00000035242	RDM1	95	80.000	Rhinopithecus_roxellana
ENSRNOG00000020751	Rdm1	97	64.130	ENSSHAG00000013584	RDM1	100	64.130	Sarcophilus_harrisii
ENSRNOG00000020751	Rdm1	91	50.958	ENSSPUG00000010941	RDM1	94	50.958	Sphenodon_punctatus
ENSRNOG00000020751	Rdm1	89	31.765	ENSSPAG00000011690	-	92	31.765	Stegastes_partitus
ENSRNOG00000020751	Rdm1	87	60.246	ENSSSCG00000017574	-	93	66.516	Sus_scrofa
ENSRNOG00000020751	Rdm1	86	58.197	ENSTBEG00000010030	RDM1	97	58.197	Tupaia_belangeri
ENSRNOG00000020751	Rdm1	98	74.910	ENSUAMG00000027279	RDM1	98	74.910	Ursus_americanus
ENSRNOG00000020751	Rdm1	98	74.910	ENSUMAG00000015423	RDM1	96	74.910	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component