EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020772 (Gene tree)
Gene ID: 287727
Gene Symbol: Dhx8
Alias: LOC287727|LRRGT00035
Full Name: DEAH-box helicase 8
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 37474 bases
Position: chr10:89645973-89683446
Accession: 1310723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000043050	S1	PF00575.23	9.1e-15	1	1
ENSRNOP00000072141	S1	PF00575.23	9.4e-15	1	1
ENSRNOP00000043050	HA2	PF04408.23	2e-24	1	1
ENSRNOP00000072141	HA2	PF04408.23	2e-24	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000048140	-	3633	-	ENSRNOP00000043050	1210 (aa)	-	Q6TXG4
ENSRNOT00000086892	-	4436	XM_006247286	ENSRNOP00000072141	1242 (aa)	XP_006247348	A0A0G2K283

Gene Model

Click here to download ENSRNOG00000020772's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000020772	Dhx8	51	40.686	ENSRNOG00000010369	Dhx29	52	40.686
ENSRNOG00000020772	Dhx8	54	47.094	ENSRNOG00000015928	Dhx35	95	47.094
ENSRNOG00000020772	Dhx8	53	32.121	ENSRNOG00000008062	Dqx1	91	32.121
ENSRNOG00000020772	Dhx8	53	52.366	ENSRNOG00000003844	Dhx15	82	52.366
ENSRNOG00000020772	Dhx8	60	33.667	ENSRNOG00000039241	Ythdc2	58	33.667
ENSRNOG00000020772	Dhx8	50	42.739	ENSRNOG00000022171	Dhx37	59	42.623
ENSRNOG00000020772	Dhx8	51	47.227	ENSRNOG00000007054	Dhx33	90	47.227
ENSRNOG00000020772	Dhx8	53	33.133	ENSRNOG00000018119	Dhx32	88	33.133
ENSRNOG00000020772	Dhx8	50	40.201	ENSRNOG00000054272	Dhx57	52	40.201
ENSRNOG00000020772	Dhx8	52	58.954	ENSRNOG00000030157	Dhx16	60	58.954
ENSRNOG00000020772	Dhx8	51	43.798	ENSRNOG00000004549	Dhx40	85	43.243
ENSRNOG00000020772	Dhx8	51	32.173	ENSRNOG00000014599	Dhx36	71	32.263
ENSRNOG00000020772	Dhx8	67	47.031	ENSRNOG00000014619	Dhx38	68	45.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020772	Dhx8	100	97.101	ENSG00000067596	DHX8	100	97.182	Homo_sapiens
ENSRNOG00000020772	Dhx8	80	94.595	ENSAPOG00000018162	dhx8	81	95.723	Acanthochromis_polyacanthus
ENSRNOG00000020772	Dhx8	99	95.920	ENSAMEG00000018294	DHX8	100	96.080	Ailuropoda_melanoleuca
ENSRNOG00000020772	Dhx8	99	85.959	ENSACIG00000013170	dhx8	85	95.542	Amphilophus_citrinellus
ENSRNOG00000020772	Dhx8	97	86.701	ENSAOCG00000006439	dhx8	99	86.882	Amphiprion_ocellaris
ENSRNOG00000020772	Dhx8	99	86.390	ENSAPEG00000005641	dhx8	94	94.219	Amphiprion_percula
ENSRNOG00000020772	Dhx8	98	92.692	ENSATEG00000007660	dhx8	97	92.692	Anabas_testudineus
ENSRNOG00000020772	Dhx8	100	96.377	ENSANAG00000030580	DHX8	100	96.538	Aotus_nancymaae
ENSRNOG00000020772	Dhx8	91	91.434	ENSACLG00000024759	dhx8	92	95.542	Astatotilapia_calliptera
ENSRNOG00000020772	Dhx8	87	94.726	ENSAMXG00000009430	dhx8	84	94.726	Astyanax_mexicanus
ENSRNOG00000020772	Dhx8	100	96.377	ENSBTAG00000008339	DHX8	100	96.377	Bos_taurus
ENSRNOG00000020772	Dhx8	79	68.421	WBGene00003393	mog-5	84	66.175	Caenorhabditis_elegans
ENSRNOG00000020772	Dhx8	100	96.538	ENSCJAG00000010659	-	100	96.699	Callithrix_jacchus
ENSRNOG00000020772	Dhx8	100	96.377	ENSCAFG00000014556	DHX8	100	96.457	Canis_familiaris
ENSRNOG00000020772	Dhx8	100	96.377	ENSCAFG00020012922	DHX8	100	96.699	Canis_lupus_dingo
ENSRNOG00000020772	Dhx8	100	96.296	ENSCHIG00000009291	DHX8	100	96.377	Capra_hircus
ENSRNOG00000020772	Dhx8	100	96.377	ENSTSYG00000008782	DHX8	100	96.538	Carlito_syrichta
ENSRNOG00000020772	Dhx8	96	94.891	ENSCAPG00000005701	DHX8	98	94.975	Cavia_aperea
ENSRNOG00000020772	Dhx8	100	94.610	ENSCPOG00000000224	DHX8	100	94.690	Cavia_porcellus
ENSRNOG00000020772	Dhx8	100	96.538	ENSCCAG00000021748	DHX8	100	96.699	Cebus_capucinus
ENSRNOG00000020772	Dhx8	100	97.021	ENSCATG00000043128	DHX8	100	97.182	Cercocebus_atys
ENSRNOG00000020772	Dhx8	100	95.093	ENSCLAG00000016045	DHX8	100	95.093	Chinchilla_lanigera
ENSRNOG00000020772	Dhx8	81	96.912	ENSCSAG00000003443	DHX8	99	88.987	Chlorocebus_sabaeus
ENSRNOG00000020772	Dhx8	99	88.781	ENSCHOG00000009720	DHX8	100	88.943	Choloepus_hoffmanni
ENSRNOG00000020772	Dhx8	77	81.432	ENSCING00000001546	-	81	80.705	Ciona_intestinalis
ENSRNOG00000020772	Dhx8	80	81.607	ENSCSAVG00000002918	-	92	80.440	Ciona_savignyi
ENSRNOG00000020772	Dhx8	100	95.250	ENSCANG00000031479	DHX8	100	95.330	Colobus_angolensis_palliatus
ENSRNOG00000020772	Dhx8	100	98.792	ENSCGRG00001021413	Dhx8	100	98.792	Cricetulus_griseus_chok1gshd
ENSRNOG00000020772	Dhx8	80	94.094	ENSCSEG00000015029	dhx8	81	95.301	Cynoglossus_semilaevis
ENSRNOG00000020772	Dhx8	90	91.900	ENSCVAG00000006188	dhx8	93	95.339	Cyprinodon_variegatus
ENSRNOG00000020772	Dhx8	89	92.438	ENSDARG00000054707	dhx8	92	92.103	Danio_rerio
ENSRNOG00000020772	Dhx8	100	95.690	ENSDNOG00000013606	DHX8	100	95.850	Dasypus_novemcinctus
ENSRNOG00000020772	Dhx8	100	93.881	ENSDORG00000013845	Dhx8	100	94.042	Dipodomys_ordii
ENSRNOG00000020772	Dhx8	92	76.440	FBgn0086895	pea	86	75.326	Drosophila_melanogaster
ENSRNOG00000020772	Dhx8	59	99.583	ENSETEG00000010986	DHX8	60	99.583	Echinops_telfairi
ENSRNOG00000020772	Dhx8	94	73.876	ENSEBUG00000001680	dhx8	80	83.120	Eptatretus_burgeri
ENSRNOG00000020772	Dhx8	100	96.940	ENSEASG00005010097	DHX8	100	97.101	Equus_asinus_asinus
ENSRNOG00000020772	Dhx8	100	97.101	ENSECAG00000019601	DHX8	100	97.343	Equus_caballus
ENSRNOG00000020772	Dhx8	77	99.716	ENSEEUG00000004835	-	79	99.716	Erinaceus_europaeus
ENSRNOG00000020772	Dhx8	81	94.223	ENSELUG00000007955	dhx8	84	94.848	Esox_lucius
ENSRNOG00000020772	Dhx8	100	96.940	ENSFCAG00000009908	DHX8	100	97.101	Felis_catus
ENSRNOG00000020772	Dhx8	100	92.840	ENSFDAG00000017832	-	83	98.408	Fukomys_damarensis
ENSRNOG00000020772	Dhx8	92	94.294	ENSFHEG00000012389	dhx8	93	95.316	Fundulus_heteroclitus
ENSRNOG00000020772	Dhx8	91	93.700	ENSGMOG00000016093	dhx8	94	94.619	Gadus_morhua
ENSRNOG00000020772	Dhx8	79	91.740	ENSGMOG00000016045	dhx8	84	91.740	Gadus_morhua
ENSRNOG00000020772	Dhx8	89	94.769	ENSGAFG00000012510	dhx8	81	95.339	Gambusia_affinis
ENSRNOG00000020772	Dhx8	93	86.494	ENSGACG00000003750	dhx8	89	94.898	Gasterosteus_aculeatus
ENSRNOG00000020772	Dhx8	96	77.360	ENSGACG00000003736	dhx8	85	85.729	Gasterosteus_aculeatus
ENSRNOG00000020772	Dhx8	100	96.940	ENSGGOG00000000143	DHX8	100	97.021	Gorilla_gorilla
ENSRNOG00000020772	Dhx8	86	93.498	ENSHBUG00000005644	dhx8	91	95.542	Haplochromis_burtoni
ENSRNOG00000020772	Dhx8	84	96.650	ENSHGLG00000011583	-	82	98.211	Heterocephalus_glaber_female
ENSRNOG00000020772	Dhx8	84	96.552	ENSHGLG00100000532	-	82	98.111	Heterocephalus_glaber_male
ENSRNOG00000020772	Dhx8	67	78.853	ENSHCOG00000016177	dhx8	82	95.301	Hippocampus_comes
ENSRNOG00000020772	Dhx8	79	96.524	ENSIPUG00000019179	dhx8	82	96.146	Ictalurus_punctatus
ENSRNOG00000020772	Dhx8	100	97.746	ENSSTOG00000013747	DHX8	100	97.746	Ictidomys_tridecemlineatus
ENSRNOG00000020772	Dhx8	97	94.371	ENSJJAG00000017249	Dhx8	91	96.577	Jaculus_jaculus
ENSRNOG00000020772	Dhx8	80	94.695	ENSKMAG00000005568	dhx8	81	95.441	Kryptolebias_marmoratus
ENSRNOG00000020772	Dhx8	81	92.560	ENSLBEG00000012048	dhx8	83	92.986	Labrus_bergylta
ENSRNOG00000020772	Dhx8	99	78.758	ENSLBEG00000011490	dhx8	89	87.072	Labrus_bergylta
ENSRNOG00000020772	Dhx8	99	90.954	ENSLACG00000001765	DHX8	84	96.315	Latimeria_chalumnae
ENSRNOG00000020772	Dhx8	79	96.758	ENSLOCG00000012147	dhx8	83	96.116	Lepisosteus_oculatus
ENSRNOG00000020772	Dhx8	96	95.930	ENSLAFG00000022159	DHX8	100	95.930	Loxodonta_africana
ENSRNOG00000020772	Dhx8	100	96.940	ENSMFAG00000044651	DHX8	100	97.101	Macaca_fascicularis
ENSRNOG00000020772	Dhx8	100	96.216	ENSMMUG00000012071	DHX8	100	96.296	Macaca_mulatta
ENSRNOG00000020772	Dhx8	100	94.928	ENSMNEG00000033786	DHX8	99	97.210	Macaca_nemestrina
ENSRNOG00000020772	Dhx8	93	92.887	ENSMLEG00000006176	DHX8	95	94.561	Mandrillus_leucophaeus
ENSRNOG00000020772	Dhx8	99	86.900	ENSMAMG00000006195	dhx8	81	95.812	Mastacembelus_armatus
ENSRNOG00000020772	Dhx8	86	93.498	ENSMZEG00005007559	dhx8	91	95.542	Maylandia_zebra
ENSRNOG00000020772	Dhx8	98	86.672	ENSMGAG00000002343	DHX8	84	92.035	Meleagris_gallopavo
ENSRNOG00000020772	Dhx8	100	97.262	ENSMICG00000009509	DHX8	100	97.424	Microcebus_murinus
ENSRNOG00000020772	Dhx8	100	97.826	ENSMOCG00000008962	Dhx8	100	97.987	Microtus_ochrogaster
ENSRNOG00000020772	Dhx8	91	86.462	ENSMMOG00000000596	dhx8	91	95.137	Mola_mola
ENSRNOG00000020772	Dhx8	66	89.093	ENSMMOG00000000567	dhx8	100	89.093	Mola_mola
ENSRNOG00000020772	Dhx8	99	94.386	ENSMODG00000015181	DHX8	99	94.467	Monodelphis_domestica
ENSRNOG00000020772	Dhx8	80	92.292	ENSMALG00000013129	dhx8	81	93.009	Monopterus_albus
ENSRNOG00000020772	Dhx8	100	99.034	MGP_CAROLIEiJ_G0017228	Dhx8	100	99.034	Mus_caroli
ENSRNOG00000020772	Dhx8	100	99.357	ENSMUSG00000034931	Dhx8	100	99.489	Mus_musculus
ENSRNOG00000020772	Dhx8	100	99.598	MGP_PahariEiJ_G0018358	Dhx8	100	99.598	Mus_pahari
ENSRNOG00000020772	Dhx8	100	98.631	MGP_SPRETEiJ_G0018071	Dhx8	100	99.188	Mus_spretus
ENSRNOG00000020772	Dhx8	100	96.860	ENSMPUG00000009717	DHX8	100	96.699	Mustela_putorius_furo
ENSRNOG00000020772	Dhx8	83	94.235	ENSMLUG00000000090	DHX8	81	95.432	Myotis_lucifugus
ENSRNOG00000020772	Dhx8	100	98.712	ENSNGAG00000023993	Dhx8	100	98.712	Nannospalax_galili
ENSRNOG00000020772	Dhx8	89	91.996	ENSNBRG00000023205	dhx8	91	95.643	Neolamprologus_brichardi
ENSRNOG00000020772	Dhx8	96	90.856	ENSMEUG00000016093	DHX8	100	90.940	Notamacropus_eugenii
ENSRNOG00000020772	Dhx8	87	97.792	ENSOPRG00000014865	DHX8	90	92.197	Ochotona_princeps
ENSRNOG00000020772	Dhx8	100	93.865	ENSODEG00000018025	DHX8	100	93.944	Octodon_degus
ENSRNOG00000020772	Dhx8	80	95.095	ENSONIG00000018248	dhx8	81	95.846	Oreochromis_niloticus
ENSRNOG00000020772	Dhx8	52	89.443	ENSOANG00000003160	-	79	89.595	Ornithorhynchus_anatinus
ENSRNOG00000020772	Dhx8	97	97.273	ENSOCUG00000008014	DHX8	99	97.438	Oryctolagus_cuniculus
ENSRNOG00000020772	Dhx8	98	86.705	ENSORLG00000011951	dhx8	96	86.623	Oryzias_latipes
ENSRNOG00000020772	Dhx8	80	94.695	ENSORLG00020022333	dhx8	79	95.825	Oryzias_latipes_hni
ENSRNOG00000020772	Dhx8	81	94.141	ENSORLG00015021793	dhx8	78	95.723	Oryzias_latipes_hsok
ENSRNOG00000020772	Dhx8	97	85.786	ENSOMEG00000004222	dhx8	92	93.638	Oryzias_melastigma
ENSRNOG00000020772	Dhx8	100	95.823	ENSOGAG00000010418	DHX8	99	95.984	Otolemur_garnettii
ENSRNOG00000020772	Dhx8	100	96.296	ENSOARG00000005409	DHX8	99	96.377	Ovis_aries
ENSRNOG00000020772	Dhx8	100	97.101	ENSPPAG00000042508	DHX8	100	97.182	Pan_paniscus
ENSRNOG00000020772	Dhx8	100	96.940	ENSPPRG00000003753	DHX8	100	97.101	Panthera_pardus
ENSRNOG00000020772	Dhx8	100	96.940	ENSPTIG00000008944	DHX8	100	97.101	Panthera_tigris_altaica
ENSRNOG00000020772	Dhx8	100	97.101	ENSPTRG00000009246	DHX8	100	97.182	Pan_troglodytes
ENSRNOG00000020772	Dhx8	100	97.262	ENSPANG00000021364	DHX8	100	97.424	Papio_anubis
ENSRNOG00000020772	Dhx8	98	85.119	ENSPKIG00000001290	dhx8	94	95.736	Paramormyrops_kingsleyae
ENSRNOG00000020772	Dhx8	82	93.066	ENSPMGG00000019078	dhx8	83	95.354	Periophthalmus_magnuspinnatus
ENSRNOG00000020772	Dhx8	100	99.275	ENSPEMG00000012654	Dhx8	100	99.275	Peromyscus_maniculatus_bairdii
ENSRNOG00000020772	Dhx8	61	94.188	ENSPMAG00000001726	dhx8	100	94.188	Petromyzon_marinus
ENSRNOG00000020772	Dhx8	99	94.386	ENSPCIG00000030254	DHX8	99	94.386	Phascolarctos_cinereus
ENSRNOG00000020772	Dhx8	80	94.494	ENSPFOG00000017661	dhx8	78	95.710	Poecilia_formosa
ENSRNOG00000020772	Dhx8	80	94.494	ENSPLAG00000011548	dhx8	78	95.710	Poecilia_latipinna
ENSRNOG00000020772	Dhx8	80	94.494	ENSPMEG00000008166	dhx8	78	95.710	Poecilia_mexicana
ENSRNOG00000020772	Dhx8	80	94.695	ENSPREG00000011752	dhx8	83	94.118	Poecilia_reticulata
ENSRNOG00000020772	Dhx8	100	97.021	ENSPPYG00000008357	DHX8	100	97.101	Pongo_abelii
ENSRNOG00000020772	Dhx8	100	85.266	ENSPCAG00000015519	DHX8	100	85.266	Procavia_capensis
ENSRNOG00000020772	Dhx8	100	95.733	ENSPVAG00000014872	DHX8	100	95.813	Pteropus_vampyrus
ENSRNOG00000020772	Dhx8	80	94.795	ENSPNYG00000001365	dhx8	81	95.542	Pundamilia_nyererei
ENSRNOG00000020772	Dhx8	79	96.146	ENSPNAG00000008427	dhx8	81	96.146	Pygocentrus_nattereri
ENSRNOG00000020772	Dhx8	100	93.961	ENSRBIG00000039031	DHX8	100	100.000	Rhinopithecus_bieti
ENSRNOG00000020772	Dhx8	100	96.940	ENSRROG00000036032	DHX8	100	97.021	Rhinopithecus_roxellana
ENSRNOG00000020772	Dhx8	78	50.051	YER013W	-	84	49.448	Saccharomyces_cerevisiae
ENSRNOG00000020772	Dhx8	100	96.538	ENSSBOG00000031719	DHX8	100	96.699	Saimiri_boliviensis_boliviensis
ENSRNOG00000020772	Dhx8	99	93.984	ENSSHAG00000009871	DHX8	99	94.065	Sarcophilus_harrisii
ENSRNOG00000020772	Dhx8	81	95.087	ENSSFOG00015024187	dhx8	82	96.319	Scleropages_formosus
ENSRNOG00000020772	Dhx8	98	76.936	ENSSMAG00000008522	dhx8	86	86.200	Scophthalmus_maximus
ENSRNOG00000020772	Dhx8	92	88.868	ENSSMAG00000008607	dhx8	88	93.434	Scophthalmus_maximus
ENSRNOG00000020772	Dhx8	98	78.455	ENSSDUG00000010822	dhx8	86	85.904	Seriola_dumerili
ENSRNOG00000020772	Dhx8	86	93.644	ENSSDUG00000010774	dhx8	91	94.833	Seriola_dumerili
ENSRNOG00000020772	Dhx8	92	90.530	ENSSLDG00000023594	dhx8	93	95.441	Seriola_lalandi_dorsalis
ENSRNOG00000020772	Dhx8	99	77.372	ENSSLDG00000023277	dhx8	94	85.044	Seriola_lalandi_dorsalis
ENSRNOG00000020772	Dhx8	83	100.000	ENSSARG00000007300	DHX8	85	100.000	Sorex_araneus
ENSRNOG00000020772	Dhx8	91	89.391	ENSSPAG00000006314	dhx8	83	90.365	Stegastes_partitus
ENSRNOG00000020772	Dhx8	100	95.733	ENSSSCG00000017378	DHX8	100	95.894	Sus_scrofa
ENSRNOG00000020772	Dhx8	99	76.973	ENSTRUG00000004063	dhx8	94	86.653	Takifugu_rubripes
ENSRNOG00000020772	Dhx8	88	88.205	ENSTNIG00000002771	dhx8	94	86.952	Tetraodon_nigroviridis
ENSRNOG00000020772	Dhx8	83	96.994	ENSTBEG00000012089	DHX8	78	96.994	Tupaia_belangeri
ENSRNOG00000020772	Dhx8	100	94.042	ENSTTRG00000016056	DHX8	100	93.961	Tursiops_truncatus
ENSRNOG00000020772	Dhx8	100	96.699	ENSUAMG00000018121	DHX8	100	96.699	Ursus_americanus
ENSRNOG00000020772	Dhx8	93	96.785	ENSUMAG00000012797	DHX8	100	96.699	Ursus_maritimus
ENSRNOG00000020772	Dhx8	71	100.000	ENSVPAG00000004605	DHX8	60	100.000	Vicugna_pacos
ENSRNOG00000020772	Dhx8	100	96.377	ENSVVUG00000017409	DHX8	97	96.457	Vulpes_vulpes
ENSRNOG00000020772	Dhx8	98	78.739	ENSXETG00000013672	dhx8	93	89.080	Xenopus_tropicalis
ENSRNOG00000020772	Dhx8	91	93.107	ENSXCOG00000003866	dhx8	86	93.731	Xiphophorus_couchianus
ENSRNOG00000020772	Dhx8	97	84.063	ENSXMAG00000017907	dhx8	85	94.016	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000390	spliceosomal complex disassembly	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0071007	U2-type catalytic step 2 spliceosome	-	IEA	Component
GO:0071007	U2-type catalytic step 2 spliceosome	-	ISO	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component