EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020860 (Gene tree)
Gene ID: 310652
Gene Symbol: Tdrkh
Alias: LOC310652|RGD1311196
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 22687 bases
Position: chr2:195651930-195674616
Accession: 1311196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028298	KH_1	PF00013.29	6.6e-34	1	2
ENSRNOP00000028298	KH_1	PF00013.29	6.6e-34	2	2
ENSRNOP00000072448	KH_1	PF00013.29	6.6e-34	1	2
ENSRNOP00000072448	KH_1	PF00013.29	6.6e-34	2	2
ENSRNOP00000028298	TUDOR	PF00567.24	1.1e-29	1	1
ENSRNOP00000072448	TUDOR	PF00567.24	1.1e-29	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000081335	-	2864	XM_006232870	ENSRNOP00000072448	560 (aa)	XP_006232932	G3V8T7
ENSRNOT00000028299	-	1970	-	ENSRNOP00000028298	560 (aa)	-	G3V8T7

Gene Model

Click here to download ENSRNOG00000020860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020860	Tdrkh	100	92.500	ENSG00000182134	TDRKH	100	98.473	Homo_sapiens
ENSRNOG00000020860	Tdrkh	100	89.876	ENSAMEG00000000421	TDRKH	99	90.586	Ailuropoda_melanoleuca
ENSRNOG00000020860	Tdrkh	85	57.377	ENSACAG00000007457	TDRKH	95	57.377	Anolis_carolinensis
ENSRNOG00000020860	Tdrkh	100	91.964	ENSANAG00000021663	TDRKH	98	93.267	Aotus_nancymaae
ENSRNOG00000020860	Tdrkh	100	91.429	ENSBTAG00000021594	TDRKH	99	91.429	Bos_taurus
ENSRNOG00000020860	Tdrkh	100	91.786	ENSCJAG00000007955	TDRKH	99	91.786	Callithrix_jacchus
ENSRNOG00000020860	Tdrkh	100	91.652	ENSCAFG00000012856	TDRKH	99	91.652	Canis_familiaris
ENSRNOG00000020860	Tdrkh	100	91.652	ENSCAFG00020009606	TDRKH	99	91.652	Canis_lupus_dingo
ENSRNOG00000020860	Tdrkh	100	90.536	ENSCHIG00000025326	TDRKH	99	90.536	Capra_hircus
ENSRNOG00000020860	Tdrkh	99	91.756	ENSTSYG00000010405	TDRKH	99	91.756	Carlito_syrichta
ENSRNOG00000020860	Tdrkh	92	89.300	ENSCAPG00000007565	TDRKH	97	89.300	Cavia_aperea
ENSRNOG00000020860	Tdrkh	100	91.071	ENSCPOG00000003556	TDRKH	99	91.071	Cavia_porcellus
ENSRNOG00000020860	Tdrkh	100	91.786	ENSCCAG00000033931	TDRKH	99	91.786	Cebus_capucinus
ENSRNOG00000020860	Tdrkh	100	92.679	ENSCATG00000041878	TDRKH	99	92.679	Cercocebus_atys
ENSRNOG00000020860	Tdrkh	100	89.643	ENSCLAG00000001088	TDRKH	99	89.643	Chinchilla_lanigera
ENSRNOG00000020860	Tdrkh	100	92.679	ENSCSAG00000001820	TDRKH	99	92.679	Chlorocebus_sabaeus
ENSRNOG00000020860	Tdrkh	88	88.095	ENSCHOG00000000264	TDRKH	88	88.095	Choloepus_hoffmanni
ENSRNOG00000020860	Tdrkh	97	62.956	ENSCPBG00000008824	TDRKH	89	63.771	Chrysemys_picta_bellii
ENSRNOG00000020860	Tdrkh	100	91.607	ENSCANG00000037367	TDRKH	99	91.607	Colobus_angolensis_palliatus
ENSRNOG00000020860	Tdrkh	96	68.889	ENSCGRG00001011699	-	99	68.889	Cricetulus_griseus_chok1gshd
ENSRNOG00000020860	Tdrkh	99	94.955	ENSCGRG00001006583	-	99	94.955	Cricetulus_griseus_chok1gshd
ENSRNOG00000020860	Tdrkh	51	67.138	ENSCGRG00001010793	-	90	67.138	Cricetulus_griseus_chok1gshd
ENSRNOG00000020860	Tdrkh	96	68.704	ENSCGRG00000013230	-	99	68.704	Cricetulus_griseus_crigri
ENSRNOG00000020860	Tdrkh	99	94.955	ENSCGRG00000012937	-	99	94.955	Cricetulus_griseus_crigri
ENSRNOG00000020860	Tdrkh	51	66.784	ENSCGRG00000012138	-	90	66.784	Cricetulus_griseus_crigri
ENSRNOG00000020860	Tdrkh	92	88.825	ENSDNOG00000035650	TDRKH	100	88.825	Dasypus_novemcinctus
ENSRNOG00000020860	Tdrkh	100	93.214	ENSDORG00000015322	Tdrkh	99	93.214	Dipodomys_ordii
ENSRNOG00000020860	Tdrkh	99	82.709	ENSETEG00000008020	TDRKH	99	82.709	Echinops_telfairi
ENSRNOG00000020860	Tdrkh	87	36.452	ENSEBUG00000010481	TDRKH	83	36.257	Eptatretus_burgeri
ENSRNOG00000020860	Tdrkh	100	91.964	ENSEASG00005005213	TDRKH	99	91.964	Equus_asinus_asinus
ENSRNOG00000020860	Tdrkh	100	92.500	ENSECAG00000013096	TDRKH	97	94.831	Equus_caballus
ENSRNOG00000020860	Tdrkh	72	95.000	ENSEEUG00000015952	TDRKH	71	95.000	Erinaceus_europaeus
ENSRNOG00000020860	Tdrkh	100	91.637	ENSFCAG00000010980	TDRKH	99	91.637	Felis_catus
ENSRNOG00000020860	Tdrkh	100	88.929	ENSFDAG00000015315	TDRKH	99	88.929	Fukomys_damarensis
ENSRNOG00000020860	Tdrkh	97	56.545	ENSGALG00000031812	TDRKH	96	56.545	Gallus_gallus
ENSRNOG00000020860	Tdrkh	99	61.713	ENSGAGG00000005447	TDRKH	99	62.238	Gopherus_agassizii
ENSRNOG00000020860	Tdrkh	100	92.857	ENSGGOG00000025419	TDRKH	98	94.036	Gorilla_gorilla
ENSRNOG00000020860	Tdrkh	100	89.146	ENSHGLG00000007478	TDRKH	99	89.146	Heterocephalus_glaber_female
ENSRNOG00000020860	Tdrkh	100	89.146	ENSHGLG00100007927	TDRKH	99	89.146	Heterocephalus_glaber_male
ENSRNOG00000020860	Tdrkh	100	93.214	ENSSTOG00000006506	TDRKH	99	93.214	Ictidomys_tridecemlineatus
ENSRNOG00000020860	Tdrkh	99	92.500	ENSJJAG00000000323	Tdrkh	99	92.500	Jaculus_jaculus
ENSRNOG00000020860	Tdrkh	71	54.699	ENSLACG00000017639	TDRKH	98	54.699	Latimeria_chalumnae
ENSRNOG00000020860	Tdrkh	99	87.879	ENSLAFG00000006274	TDRKH	99	87.879	Loxodonta_africana
ENSRNOG00000020860	Tdrkh	100	93.036	ENSMFAG00000041641	TDRKH	99	93.036	Macaca_fascicularis
ENSRNOG00000020860	Tdrkh	98	92.922	ENSMMUG00000009096	TDRKH	97	94.433	Macaca_mulatta
ENSRNOG00000020860	Tdrkh	100	93.036	ENSMNEG00000021524	TDRKH	99	93.036	Macaca_nemestrina
ENSRNOG00000020860	Tdrkh	100	92.679	ENSMLEG00000033882	TDRKH	99	92.679	Mandrillus_leucophaeus
ENSRNOG00000020860	Tdrkh	99	93.896	ENSMAUG00000019159	Tdrkh	99	93.896	Mesocricetus_auratus
ENSRNOG00000020860	Tdrkh	100	72.500	ENSMICG00000042330	-	99	72.826	Microcebus_murinus
ENSRNOG00000020860	Tdrkh	100	92.500	ENSMICG00000010682	-	99	92.500	Microcebus_murinus
ENSRNOG00000020860	Tdrkh	99	85.870	ENSMOCG00000002113	-	99	85.870	Microtus_ochrogaster
ENSRNOG00000020860	Tdrkh	99	66.904	ENSMOCG00000014074	-	99	66.370	Microtus_ochrogaster
ENSRNOG00000020860	Tdrkh	100	81.722	ENSMODG00000018906	TDRKH	96	81.722	Monodelphis_domestica
ENSRNOG00000020860	Tdrkh	100	98.393	MGP_CAROLIEiJ_G0025310	Tdrkh	99	99.660	Mus_caroli
ENSRNOG00000020860	Tdrkh	100	98.571	ENSMUSG00000041912	Tdrkh	99	99.660	Mus_musculus
ENSRNOG00000020860	Tdrkh	100	97.857	MGP_PahariEiJ_G0026753	Tdrkh	100	97.857	Mus_pahari
ENSRNOG00000020860	Tdrkh	100	98.393	MGP_SPRETEiJ_G0026252	Tdrkh	99	99.660	Mus_spretus
ENSRNOG00000020860	Tdrkh	96	91.466	ENSMPUG00000003558	TDRKH	99	90.925	Mustela_putorius_furo
ENSRNOG00000020860	Tdrkh	100	89.107	ENSMLUG00000002213	TDRKH	99	89.107	Myotis_lucifugus
ENSRNOG00000020860	Tdrkh	100	95.536	ENSNGAG00000017825	Tdrkh	100	95.536	Nannospalax_galili
ENSRNOG00000020860	Tdrkh	100	92.321	ENSNLEG00000010284	TDRKH	98	93.638	Nomascus_leucogenys
ENSRNOG00000020860	Tdrkh	89	94.805	ENSMEUG00000006144	TDRKH	89	94.805	Notamacropus_eugenii
ENSRNOG00000020860	Tdrkh	80	90.909	ENSOPRG00000016049	TDRKH	80	90.909	Ochotona_princeps
ENSRNOG00000020860	Tdrkh	100	87.500	ENSODEG00000001075	-	99	87.500	Octodon_degus
ENSRNOG00000020860	Tdrkh	100	89.286	ENSODEG00000009532	-	99	89.286	Octodon_degus
ENSRNOG00000020860	Tdrkh	62	72.340	ENSOANG00000001094	-	88	72.340	Ornithorhynchus_anatinus
ENSRNOG00000020860	Tdrkh	100	79.464	ENSOCUG00000001387	TDRKH	99	79.464	Oryctolagus_cuniculus
ENSRNOG00000020860	Tdrkh	99	75.269	ENSOGAG00000032601	-	99	75.269	Otolemur_garnettii
ENSRNOG00000020860	Tdrkh	99	82.716	ENSOGAG00000001839	-	99	82.716	Otolemur_garnettii
ENSRNOG00000020860	Tdrkh	51	76.389	ENSOGAG00000030085	-	97	74.653	Otolemur_garnettii
ENSRNOG00000020860	Tdrkh	100	90.536	ENSOARG00000021052	TDRKH	99	90.536	Ovis_aries
ENSRNOG00000020860	Tdrkh	100	92.857	ENSPPAG00000028994	TDRKH	99	92.857	Pan_paniscus
ENSRNOG00000020860	Tdrkh	100	92.171	ENSPPRG00000001585	TDRKH	99	92.171	Panthera_pardus
ENSRNOG00000020860	Tdrkh	100	92.171	ENSPTIG00000019916	TDRKH	99	92.171	Panthera_tigris_altaica
ENSRNOG00000020860	Tdrkh	100	92.857	ENSPTRG00000001297	TDRKH	98	94.235	Pan_troglodytes
ENSRNOG00000020860	Tdrkh	100	92.679	ENSPANG00000001986	TDRKH	99	92.679	Papio_anubis
ENSRNOG00000020860	Tdrkh	93	62.384	ENSPSIG00000008541	TDRKH	100	62.384	Pelodiscus_sinensis
ENSRNOG00000020860	Tdrkh	100	98.036	ENSPEMG00000011171	Tdrkh	100	98.036	Peromyscus_maniculatus_bairdii
ENSRNOG00000020860	Tdrkh	100	82.281	ENSPCIG00000021201	TDRKH	99	82.281	Phascolarctos_cinereus
ENSRNOG00000020860	Tdrkh	100	92.857	ENSPPYG00000000855	TDRKH	99	92.857	Pongo_abelii
ENSRNOG00000020860	Tdrkh	100	90.357	ENSPCOG00000027505	TDRKH	99	90.357	Propithecus_coquereli
ENSRNOG00000020860	Tdrkh	100	87.321	ENSPVAG00000005234	TDRKH	99	87.321	Pteropus_vampyrus
ENSRNOG00000020860	Tdrkh	100	92.679	ENSRBIG00000044860	TDRKH	99	92.679	Rhinopithecus_bieti
ENSRNOG00000020860	Tdrkh	100	92.679	ENSRROG00000036923	TDRKH	99	92.679	Rhinopithecus_roxellana
ENSRNOG00000020860	Tdrkh	100	73.036	ENSSBOG00000034454	TDRKH	99	73.036	Saimiri_boliviensis_boliviensis
ENSRNOG00000020860	Tdrkh	100	82.425	ENSSHAG00000015859	TDRKH	88	82.425	Sarcophilus_harrisii
ENSRNOG00000020860	Tdrkh	99	79.070	ENSSARG00000008525	TDRKH	99	79.070	Sorex_araneus
ENSRNOG00000020860	Tdrkh	90	62.764	ENSSPUG00000002369	TDRKH	95	63.340	Sphenodon_punctatus
ENSRNOG00000020860	Tdrkh	99	89.785	ENSSSCG00000027770	TDRKH	100	89.785	Sus_scrofa
ENSRNOG00000020860	Tdrkh	100	90.714	ENSTBEG00000011201	TDRKH	99	90.714	Tupaia_belangeri
ENSRNOG00000020860	Tdrkh	100	83.393	ENSTTRG00000003149	TDRKH	99	83.393	Tursiops_truncatus
ENSRNOG00000020860	Tdrkh	100	90.569	ENSUAMG00000019589	TDRKH	99	90.569	Ursus_americanus
ENSRNOG00000020860	Tdrkh	100	90.747	ENSUMAG00000001456	TDRKH	99	90.747	Ursus_maritimus
ENSRNOG00000020860	Tdrkh	100	91.964	ENSVPAG00000000666	TDRKH	99	91.964	Vicugna_pacos
ENSRNOG00000020860	Tdrkh	100	92.171	ENSVVUG00000013241	TDRKH	99	92.621	Vulpes_vulpes
ENSRNOG00000020860	Tdrkh	98	38.986	ENSXETG00000019909	tdrkh	87	41.257	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0007140	male meiotic nuclear division	-	IEA	Process
GO:0007140	male meiotic nuclear division	-	ISO	Process
GO:0007283	spermatogenesis	-	IEA	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0009566	fertilization	-	IEA	Process
GO:0009566	fertilization	-	ISO	Process
GO:0016021	integral component of membrane	-	IEA	Component
GO:0034587	piRNA metabolic process	-	IEA	Process
GO:0034587	piRNA metabolic process	-	ISO	Process
GO:0043046	DNA methylation involved in gamete generation	-	IEA	Process
GO:0043046	DNA methylation involved in gamete generation	-	ISO	Process
GO:0071546	pi-body	-	IEA	Component
GO:0071546	pi-body	-	ISO	Component
GO:0071547	piP-body	-	IEA	Component
GO:0071547	piP-body	-	ISO	Component