EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000020946 (Gene tree)
Gene ID: 363151
Gene Symbol: Ccdc12
Alias: LOC363151|RGD1306081
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 50574 bases
Position: chr8:118926478-118977051
Accession: 1306081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028426	cwf18	PF08315.12	2.9e-38	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028426	-	813	XM_006243970	ENSRNOP00000028426	166 (aa)	XP_006244032	D4A4Z0

Gene Model

Click here to download ENSRNOG00000020946's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000020946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000020946	Ccdc12	100	90.361	ENSG00000160799	CCDC12	100	90.361	Homo_sapiens
ENSRNOG00000020946	Ccdc12	96	70.988	ENSAPOG00000014426	ccdc12	59	70.988	Acanthochromis_polyacanthus
ENSRNOG00000020946	Ccdc12	100	93.976	ENSAMEG00000012658	CCDC12	100	93.976	Ailuropoda_melanoleuca
ENSRNOG00000020946	Ccdc12	68	77.876	ENSACIG00000015192	ccdc12	80	77.876	Amphilophus_citrinellus
ENSRNOG00000020946	Ccdc12	69	78.070	ENSACIG00000022676	-	81	78.070	Amphilophus_citrinellus
ENSRNOG00000020946	Ccdc12	96	71.429	ENSAOCG00000024127	ccdc12	95	71.429	Amphiprion_ocellaris
ENSRNOG00000020946	Ccdc12	96	70.988	ENSAPEG00000009155	ccdc12	84	70.988	Amphiprion_percula
ENSRNOG00000020946	Ccdc12	81	69.630	ENSATEG00000004807	ccdc12	100	69.630	Anabas_testudineus
ENSRNOG00000020946	Ccdc12	81	70.588	ENSAPLG00000005482	CCDC12	99	70.588	Anas_platyrhynchos
ENSRNOG00000020946	Ccdc12	100	74.854	ENSACAG00000004727	CCDC12	86	74.854	Anolis_carolinensis
ENSRNOG00000020946	Ccdc12	81	91.791	ENSANAG00000024483	CCDC12	100	91.791	Aotus_nancymaae
ENSRNOG00000020946	Ccdc12	93	60.510	ENSACLG00000012742	-	96	60.510	Astatotilapia_calliptera
ENSRNOG00000020946	Ccdc12	96	70.370	ENSACLG00000005356	ccdc12	98	70.370	Astatotilapia_calliptera
ENSRNOG00000020946	Ccdc12	96	70.122	ENSAMXG00000016319	ccdc12	98	70.122	Astyanax_mexicanus
ENSRNOG00000020946	Ccdc12	100	89.881	ENSBTAG00000011311	CCDC12	100	90.476	Bos_taurus
ENSRNOG00000020946	Ccdc12	80	41.304	WBGene00022092	Y69A2AR.21	86	40.000	Caenorhabditis_elegans
ENSRNOG00000020946	Ccdc12	100	90.964	ENSCJAG00000002280	CCDC12	100	90.964	Callithrix_jacchus
ENSRNOG00000020946	Ccdc12	100	93.373	ENSCAFG00000013588	CCDC12	100	93.373	Canis_familiaris
ENSRNOG00000020946	Ccdc12	100	93.373	ENSCAFG00020014024	CCDC12	93	93.373	Canis_lupus_dingo
ENSRNOG00000020946	Ccdc12	100	89.286	ENSCHIG00000014512	CCDC12	100	89.881	Capra_hircus
ENSRNOG00000020946	Ccdc12	100	90.964	ENSTSYG00000032837	CCDC12	100	90.964	Carlito_syrichta
ENSRNOG00000020946	Ccdc12	81	72.388	ENSCAPG00000007935	CCDC12	100	73.134	Cavia_aperea
ENSRNOG00000020946	Ccdc12	100	92.771	ENSCPOG00000032515	CCDC12	100	92.771	Cavia_porcellus
ENSRNOG00000020946	Ccdc12	100	90.964	ENSCCAG00000020126	CCDC12	93	90.964	Cebus_capucinus
ENSRNOG00000020946	Ccdc12	100	75.882	ENSCATG00000033681	CCDC12	92	75.882	Cercocebus_atys
ENSRNOG00000020946	Ccdc12	100	93.373	ENSCLAG00000016013	CCDC12	100	93.373	Chinchilla_lanigera
ENSRNOG00000020946	Ccdc12	100	90.361	ENSCSAG00000016154	CCDC12	93	90.361	Chlorocebus_sabaeus
ENSRNOG00000020946	Ccdc12	99	75.301	ENSCPBG00000015804	CCDC12	79	75.301	Chrysemys_picta_bellii
ENSRNOG00000020946	Ccdc12	96	50.299	ENSCING00000005261	-	96	50.299	Ciona_intestinalis
ENSRNOG00000020946	Ccdc12	100	90.361	ENSCANG00000020857	CCDC12	93	90.361	Colobus_angolensis_palliatus
ENSRNOG00000020946	Ccdc12	100	98.193	ENSCGRG00001000459	Ccdc12	100	98.193	Cricetulus_griseus_chok1gshd
ENSRNOG00000020946	Ccdc12	100	98.193	ENSCGRG00000012816	Ccdc12	100	98.193	Cricetulus_griseus_crigri
ENSRNOG00000020946	Ccdc12	96	69.136	ENSCSEG00000004543	ccdc12	98	69.136	Cynoglossus_semilaevis
ENSRNOG00000020946	Ccdc12	81	70.370	ENSCVAG00000011342	ccdc12	100	70.370	Cyprinodon_variegatus
ENSRNOG00000020946	Ccdc12	96	68.125	ENSDARG00000023003	ccdc12	98	68.125	Danio_rerio
ENSRNOG00000020946	Ccdc12	100	81.928	ENSDORG00000024399	-	100	81.928	Dipodomys_ordii
ENSRNOG00000020946	Ccdc12	100	93.976	ENSDORG00000016567	-	100	93.976	Dipodomys_ordii
ENSRNOG00000020946	Ccdc12	93	43.871	FBgn0039732	CG15525	89	43.871	Drosophila_melanogaster
ENSRNOG00000020946	Ccdc12	68	91.150	ENSETEG00000000030	CCDC12	100	91.150	Echinops_telfairi
ENSRNOG00000020946	Ccdc12	96	62.264	ENSEBUG00000005674	ccdc12	98	62.264	Eptatretus_burgeri
ENSRNOG00000020946	Ccdc12	100	93.373	ENSEASG00005008148	-	69	93.373	Equus_asinus_asinus
ENSRNOG00000020946	Ccdc12	100	87.952	ENSECAG00000008649	CCDC12	100	87.952	Equus_caballus
ENSRNOG00000020946	Ccdc12	96	69.136	ENSELUG00000024105	ccdc12	98	69.325	Esox_lucius
ENSRNOG00000020946	Ccdc12	100	93.976	ENSFCAG00000015474	CCDC12	100	93.976	Felis_catus
ENSRNOG00000020946	Ccdc12	94	63.522	ENSFALG00000001895	CCDC12	98	63.522	Ficedula_albicollis
ENSRNOG00000020946	Ccdc12	100	94.578	ENSFDAG00000002549	CCDC12	100	94.578	Fukomys_damarensis
ENSRNOG00000020946	Ccdc12	96	70.370	ENSFHEG00000016247	ccdc12	91	70.370	Fundulus_heteroclitus
ENSRNOG00000020946	Ccdc12	96	60.248	ENSGMOG00000016901	ccdc12	98	60.248	Gadus_morhua
ENSRNOG00000020946	Ccdc12	87	70.345	ENSGAFG00000006762	ccdc12	98	68.944	Gambusia_affinis
ENSRNOG00000020946	Ccdc12	96	67.081	ENSGACG00000008629	ccdc12	98	67.081	Gasterosteus_aculeatus
ENSRNOG00000020946	Ccdc12	99	76.506	ENSGAGG00000019688	CCDC12	98	76.506	Gopherus_agassizii
ENSRNOG00000020946	Ccdc12	100	90.361	ENSGGOG00000009012	CCDC12	93	90.361	Gorilla_gorilla
ENSRNOG00000020946	Ccdc12	96	70.988	ENSHBUG00000016447	ccdc12	98	70.988	Haplochromis_burtoni
ENSRNOG00000020946	Ccdc12	100	93.373	ENSHGLG00000014058	CCDC12	100	93.373	Heterocephalus_glaber_female
ENSRNOG00000020946	Ccdc12	100	93.373	ENSHGLG00100005918	CCDC12	100	93.373	Heterocephalus_glaber_male
ENSRNOG00000020946	Ccdc12	96	65.644	ENSHCOG00000015164	ccdc12	98	65.644	Hippocampus_comes
ENSRNOG00000020946	Ccdc12	96	67.901	ENSIPUG00000001310	Ccdc12	98	67.901	Ictalurus_punctatus
ENSRNOG00000020946	Ccdc12	100	95.181	ENSSTOG00000003085	CCDC12	100	95.181	Ictidomys_tridecemlineatus
ENSRNOG00000020946	Ccdc12	100	93.976	ENSJJAG00000014918	Ccdc12	100	93.976	Jaculus_jaculus
ENSRNOG00000020946	Ccdc12	96	68.098	ENSKMAG00000013891	ccdc12	98	68.098	Kryptolebias_marmoratus
ENSRNOG00000020946	Ccdc12	96	70.000	ENSLBEG00000024714	ccdc12	85	70.000	Labrus_bergylta
ENSRNOG00000020946	Ccdc12	96	73.750	ENSLOCG00000005683	ccdc12	89	73.750	Lepisosteus_oculatus
ENSRNOG00000020946	Ccdc12	97	86.335	ENSLAFG00000027745	-	99	86.335	Loxodonta_africana
ENSRNOG00000020946	Ccdc12	67	93.750	ENSLAFG00000022573	-	98	93.750	Loxodonta_africana
ENSRNOG00000020946	Ccdc12	100	90.361	ENSMFAG00000002976	CCDC12	93	90.361	Macaca_fascicularis
ENSRNOG00000020946	Ccdc12	100	90.361	ENSMMUG00000019810	CCDC12	93	90.361	Macaca_mulatta
ENSRNOG00000020946	Ccdc12	100	90.361	ENSMNEG00000035785	CCDC12	93	90.361	Macaca_nemestrina
ENSRNOG00000020946	Ccdc12	100	90.361	ENSMLEG00000038060	CCDC12	93	90.361	Mandrillus_leucophaeus
ENSRNOG00000020946	Ccdc12	87	71.918	ENSMAMG00000012165	ccdc12	98	69.753	Mastacembelus_armatus
ENSRNOG00000020946	Ccdc12	96	70.988	ENSMZEG00005014728	ccdc12	98	70.988	Maylandia_zebra
ENSRNOG00000020946	Ccdc12	93	61.146	ENSMZEG00005019013	-	96	61.146	Maylandia_zebra
ENSRNOG00000020946	Ccdc12	80	70.149	ENSMGAG00000002815	CCDC12	99	64.205	Meleagris_gallopavo
ENSRNOG00000020946	Ccdc12	100	96.988	ENSMAUG00000008879	Ccdc12	100	96.988	Mesocricetus_auratus
ENSRNOG00000020946	Ccdc12	100	92.814	ENSMICG00000032886	CCDC12	100	92.814	Microcebus_murinus
ENSRNOG00000020946	Ccdc12	100	96.988	ENSMOCG00000004483	Ccdc12	100	96.988	Microtus_ochrogaster
ENSRNOG00000020946	Ccdc12	66	74.545	ENSMMOG00000001860	ccdc12	75	74.545	Mola_mola
ENSRNOG00000020946	Ccdc12	100	78.571	ENSMODG00000013967	-	100	78.571	Monodelphis_domestica
ENSRNOG00000020946	Ccdc12	100	64.671	ENSMODG00000022615	-	100	64.671	Monodelphis_domestica
ENSRNOG00000020946	Ccdc12	100	64.671	ENSMODG00000025021	-	100	64.671	Monodelphis_domestica
ENSRNOG00000020946	Ccdc12	96	69.136	ENSMALG00000011850	ccdc12	98	69.136	Monopterus_albus
ENSRNOG00000020946	Ccdc12	100	100.000	MGP_CAROLIEiJ_G0032737	-	100	100.000	Mus_caroli
ENSRNOG00000020946	Ccdc12	100	98.795	ENSMUSG00000019659	Ccdc12	100	98.795	Mus_musculus
ENSRNOG00000020946	Ccdc12	100	100.000	MGP_PahariEiJ_G0015604	Ccdc12	100	100.000	Mus_pahari
ENSRNOG00000020946	Ccdc12	100	98.193	MGP_SPRETEiJ_G0033885	Ccdc12	100	98.193	Mus_spretus
ENSRNOG00000020946	Ccdc12	100	87.952	ENSMLUG00000009547	CCDC12	100	87.952	Myotis_lucifugus
ENSRNOG00000020946	Ccdc12	100	93.373	ENSNGAG00000004149	Ccdc12	100	93.373	Nannospalax_galili
ENSRNOG00000020946	Ccdc12	96	66.250	ENSNBRG00000015275	ccdc12	98	66.250	Neolamprologus_brichardi
ENSRNOG00000020946	Ccdc12	100	88.554	ENSNLEG00000006219	CCDC12	100	88.554	Nomascus_leucogenys
ENSRNOG00000020946	Ccdc12	99	85.366	ENSOPRG00000005086	CCDC12	99	85.366	Ochotona_princeps
ENSRNOG00000020946	Ccdc12	100	93.373	ENSODEG00000012202	CCDC12	100	93.373	Octodon_degus
ENSRNOG00000020946	Ccdc12	96	70.988	ENSONIG00000003061	ccdc12	98	70.988	Oreochromis_niloticus
ENSRNOG00000020946	Ccdc12	80	72.388	ENSOANG00000004263	-	100	72.388	Ornithorhynchus_anatinus
ENSRNOG00000020946	Ccdc12	100	92.771	ENSOCUG00000012431	CCDC12	85	92.771	Oryctolagus_cuniculus
ENSRNOG00000020946	Ccdc12	96	68.098	ENSORLG00000008126	ccdc12	98	68.098	Oryzias_latipes
ENSRNOG00000020946	Ccdc12	96	69.565	ENSORLG00020013927	ccdc12	98	69.565	Oryzias_latipes_hni
ENSRNOG00000020946	Ccdc12	96	69.565	ENSORLG00015020115	ccdc12	98	69.565	Oryzias_latipes_hsok
ENSRNOG00000020946	Ccdc12	96	69.565	ENSOMEG00000014082	ccdc12	98	69.565	Oryzias_melastigma
ENSRNOG00000020946	Ccdc12	96	69.565	ENSOMEG00000022304	ccdc12	98	69.565	Oryzias_melastigma
ENSRNOG00000020946	Ccdc12	67	94.643	ENSOGAG00000016807	CCDC12	100	94.643	Otolemur_garnettii
ENSRNOG00000020946	Ccdc12	81	88.321	ENSOARG00000006426	CCDC12	100	89.051	Ovis_aries
ENSRNOG00000020946	Ccdc12	100	89.759	ENSPPAG00000028782	CCDC12	93	89.759	Pan_paniscus
ENSRNOG00000020946	Ccdc12	100	93.976	ENSPPRG00000013547	CCDC12	100	93.976	Panthera_pardus
ENSRNOG00000020946	Ccdc12	100	93.976	ENSPTIG00000014875	CCDC12	95	93.976	Panthera_tigris_altaica
ENSRNOG00000020946	Ccdc12	100	90.361	ENSPTRG00000014862	CCDC12	93	90.361	Pan_troglodytes
ENSRNOG00000020946	Ccdc12	100	90.361	ENSPANG00000017485	CCDC12	95	90.361	Papio_anubis
ENSRNOG00000020946	Ccdc12	96	70.186	ENSPKIG00000019130	ccdc12	98	71.429	Paramormyrops_kingsleyae
ENSRNOG00000020946	Ccdc12	67	81.250	ENSPSIG00000010867	CCDC12	100	81.250	Pelodiscus_sinensis
ENSRNOG00000020946	Ccdc12	96	68.519	ENSPMGG00000012211	ccdc12	98	68.519	Periophthalmus_magnuspinnatus
ENSRNOG00000020946	Ccdc12	100	77.844	ENSPEMG00000001376	-	100	77.844	Peromyscus_maniculatus_bairdii
ENSRNOG00000020946	Ccdc12	100	98.193	ENSPEMG00000022196	-	100	98.193	Peromyscus_maniculatus_bairdii
ENSRNOG00000020946	Ccdc12	94	66.879	ENSPMAG00000000005	ccdc12	99	65.680	Petromyzon_marinus
ENSRNOG00000020946	Ccdc12	100	78.916	ENSPCIG00000025941	CCDC12	100	78.916	Phascolarctos_cinereus
ENSRNOG00000020946	Ccdc12	84	72.340	ENSPFOG00000000343	ccdc12	98	69.753	Poecilia_formosa
ENSRNOG00000020946	Ccdc12	96	68.944	ENSPLAG00000019010	ccdc12	98	68.944	Poecilia_latipinna
ENSRNOG00000020946	Ccdc12	84	72.340	ENSPMEG00000022371	ccdc12	79	69.753	Poecilia_mexicana
ENSRNOG00000020946	Ccdc12	96	69.753	ENSPREG00000020932	ccdc12	79	69.753	Poecilia_reticulata
ENSRNOG00000020946	Ccdc12	100	91.566	ENSPPYG00000013924	CCDC12	82	91.566	Pongo_abelii
ENSRNOG00000020946	Ccdc12	100	92.814	ENSPCAG00000005800	CCDC12	100	92.814	Procavia_capensis
ENSRNOG00000020946	Ccdc12	100	92.216	ENSPCOG00000018682	CCDC12	93	92.216	Propithecus_coquereli
ENSRNOG00000020946	Ccdc12	100	92.169	ENSPVAG00000004204	CCDC12	100	92.169	Pteropus_vampyrus
ENSRNOG00000020946	Ccdc12	96	70.988	ENSPNYG00000016295	ccdc12	98	70.988	Pundamilia_nyererei
ENSRNOG00000020946	Ccdc12	96	54.321	ENSPNAG00000028558	ccdc12	93	76.724	Pygocentrus_nattereri
ENSRNOG00000020946	Ccdc12	100	90.361	ENSRBIG00000039910	CCDC12	93	90.361	Rhinopithecus_bieti
ENSRNOG00000020946	Ccdc12	100	90.361	ENSRROG00000039721	CCDC12	100	90.361	Rhinopithecus_roxellana
ENSRNOG00000020946	Ccdc12	100	90.964	ENSSBOG00000035443	CCDC12	93	90.964	Saimiri_boliviensis_boliviensis
ENSRNOG00000020946	Ccdc12	92	81.935	ENSSHAG00000003265	-	95	81.935	Sarcophilus_harrisii
ENSRNOG00000020946	Ccdc12	97	68.712	ENSSFOG00015001307	ccdc12	99	68.712	Scleropages_formosus
ENSRNOG00000020946	Ccdc12	96	70.370	ENSSMAG00000019856	ccdc12	98	70.370	Scophthalmus_maximus
ENSRNOG00000020946	Ccdc12	94	69.620	ENSSDUG00000006549	ccdc12	96	69.620	Seriola_dumerili
ENSRNOG00000020946	Ccdc12	96	69.753	ENSSLDG00000015956	ccdc12	98	69.753	Seriola_lalandi_dorsalis
ENSRNOG00000020946	Ccdc12	58	96.875	ENSSARG00000004686	-	58	96.875	Sorex_araneus
ENSRNOG00000020946	Ccdc12	68	71.681	ENSSPUG00000013054	CCDC12	91	49.324	Sphenodon_punctatus
ENSRNOG00000020946	Ccdc12	96	69.753	ENSSPAG00000007010	ccdc12	98	69.753	Stegastes_partitus
ENSRNOG00000020946	Ccdc12	100	93.373	ENSSSCG00000011329	-	100	93.373	Sus_scrofa
ENSRNOG00000020946	Ccdc12	93	52.597	ENSSSCG00000007882	-	97	52.597	Sus_scrofa
ENSRNOG00000020946	Ccdc12	64	68.519	ENSTGUG00000000186	CCDC12	86	68.519	Taeniopygia_guttata
ENSRNOG00000020946	Ccdc12	96	66.038	ENSTRUG00000014023	ccdc12	83	66.038	Takifugu_rubripes
ENSRNOG00000020946	Ccdc12	96	68.553	ENSTNIG00000018407	ccdc12	96	68.553	Tetraodon_nigroviridis
ENSRNOG00000020946	Ccdc12	100	69.461	ENSTBEG00000000048	CCDC12	100	69.461	Tupaia_belangeri
ENSRNOG00000020946	Ccdc12	100	83.333	ENSTTRG00000015854	CCDC12	100	83.333	Tursiops_truncatus
ENSRNOG00000020946	Ccdc12	100	87.349	ENSUAMG00000025548	CCDC12	97	93.571	Ursus_americanus
ENSRNOG00000020946	Ccdc12	100	93.373	ENSUMAG00000004346	CCDC12	100	93.373	Ursus_maritimus
ENSRNOG00000020946	Ccdc12	68	75.221	ENSVPAG00000000070	-	100	75.221	Vicugna_pacos
ENSRNOG00000020946	Ccdc12	100	93.373	ENSVVUG00000004582	CCDC12	100	93.373	Vulpes_vulpes
ENSRNOG00000020946	Ccdc12	80	76.692	ENSXETG00000013123	ccdc12	98	76.692	Xenopus_tropicalis
ENSRNOG00000020946	Ccdc12	96	68.944	ENSXCOG00000019741	ccdc12	98	68.944	Xiphophorus_couchianus
ENSRNOG00000020946	Ccdc12	96	68.944	ENSXMAG00000014098	ccdc12	79	68.944	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process