EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000021044 (Gene tree)
Gene ID: 685233
Gene Symbol: Gpatch8
Alias: LOC685233
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 80378 bases
Position: chr10:90421442-90501819
Accession: 1596463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000047081	zf-C2H2_jaz	PF12171.8	2.7e-06	1	1
ENSRNOP00000047081	G-patch	PF01585.23	8.4e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000050474	-	6843	XM_001062937	ENSRNOP00000047081	1513 (aa)	XP_001062937	F1M4M5

Gene Model

Click here to download ENSRNOG00000021044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000021044's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000021044	Gpatch8	55	85.457	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
ENSRNOG00000021044	Gpatch8	100	86.842	ENSAMEG00000018376	GPATCH8	100	87.303	Ailuropoda_melanoleuca
ENSRNOG00000021044	Gpatch8	99	64.094	ENSAPLG00000003095	GPATCH8	55	62.143	Anas_platyrhynchos
ENSRNOG00000021044	Gpatch8	100	63.878	ENSACAG00000012522	GPATCH8	55	57.768	Anolis_carolinensis
ENSRNOG00000021044	Gpatch8	55	84.375	ENSANAG00000032773	GPATCH8	100	87.500	Aotus_nancymaae
ENSRNOG00000021044	Gpatch8	100	87.057	ENSBTAG00000038316	GPATCH8	100	87.385	Bos_taurus
ENSRNOG00000021044	Gpatch8	55	84.255	ENSCJAG00000009807	GPATCH8	100	87.039	Callithrix_jacchus
ENSRNOG00000021044	Gpatch8	100	87.237	ENSCAFG00000014136	GPATCH8	100	87.697	Canis_familiaris
ENSRNOG00000021044	Gpatch8	99	87.127	ENSCAFG00020009830	GPATCH8	99	87.591	Canis_lupus_dingo
ENSRNOG00000021044	Gpatch8	99	85.940	ENSCHIG00000008962	GPATCH8	99	86.746	Capra_hircus
ENSRNOG00000021044	Gpatch8	100	82.225	ENSTSYG00000033153	GPATCH8	100	81.435	Carlito_syrichta
ENSRNOG00000021044	Gpatch8	55	84.495	ENSCCAG00000030686	GPATCH8	100	87.566	Cebus_capucinus
ENSRNOG00000021044	Gpatch8	55	85.337	ENSCATG00000028156	GPATCH8	100	88.224	Cercocebus_atys
ENSRNOG00000021044	Gpatch8	55	84.976	ENSCSAG00000003586	GPATCH8	100	88.026	Chlorocebus_sabaeus
ENSRNOG00000021044	Gpatch8	100	66.949	ENSCPBG00000008955	GPATCH8	55	62.293	Chrysemys_picta_bellii
ENSRNOG00000021044	Gpatch8	55	84.976	ENSCANG00000039731	GPATCH8	100	87.961	Colobus_angolensis_palliatus
ENSRNOG00000021044	Gpatch8	100	89.974	ENSCGRG00001020210	Gpatch8	100	90.106	Cricetulus_griseus_chok1gshd
ENSRNOG00000021044	Gpatch8	100	89.974	ENSCGRG00000017090	Gpatch8	100	90.106	Cricetulus_griseus_crigri
ENSRNOG00000021044	Gpatch8	100	86.504	ENSDNOG00000005102	GPATCH8	100	86.438	Dasypus_novemcinctus
ENSRNOG00000021044	Gpatch8	100	87.697	ENSDORG00000027664	Gpatch8	100	87.829	Dipodomys_ordii
ENSRNOG00000021044	Gpatch8	55	77.053	ENSETEG00000001325	GPATCH8	100	81.872	Echinops_telfairi
ENSRNOG00000021044	Gpatch8	66	48.505	ENSEBUG00000005749	gpatch8	71	48.505	Eptatretus_burgeri
ENSRNOG00000021044	Gpatch8	100	88.413	ENSEASG00005010264	GPATCH8	92	88.677	Equus_asinus_asinus
ENSRNOG00000021044	Gpatch8	100	88.216	ENSECAG00000040232	GPATCH8	99	88.479	Equus_caballus
ENSRNOG00000021044	Gpatch8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSRNOG00000021044	Gpatch8	55	83.995	ENSFCAG00000043334	GPATCH8	56	84.468	Felis_catus
ENSRNOG00000021044	Gpatch8	99	63.648	ENSFALG00000009554	GPATCH8	55	62.214	Ficedula_albicollis
ENSRNOG00000021044	Gpatch8	100	61.652	ENSGALG00000041556	GPATCH8	51	62.272	Gallus_gallus
ENSRNOG00000021044	Gpatch8	100	67.122	ENSGAGG00000008358	GPATCH8	55	63.412	Gopherus_agassizii
ENSRNOG00000021044	Gpatch8	99	85.026	ENSGGOG00000013860	GPATCH8	100	85.855	Gorilla_gorilla
ENSRNOG00000021044	Gpatch8	100	74.442	ENSHGLG00000017687	GPATCH8	55	70.525	Heterocephalus_glaber_female
ENSRNOG00000021044	Gpatch8	75	77.076	ENSHGLG00100010738	GPATCH8	98	77.076	Heterocephalus_glaber_male
ENSRNOG00000021044	Gpatch8	100	87.623	ENSSTOG00000025022	GPATCH8	100	87.755	Ictidomys_tridecemlineatus
ENSRNOG00000021044	Gpatch8	100	87.228	ENSJJAG00000017797	Gpatch8	100	87.887	Jaculus_jaculus
ENSRNOG00000021044	Gpatch8	51	56.978	ENSLACG00000017530	GPATCH8	55	55.948	Latimeria_chalumnae
ENSRNOG00000021044	Gpatch8	72	85.662	ENSLAFG00000032250	GPATCH8	100	84.484	Loxodonta_africana
ENSRNOG00000021044	Gpatch8	55	85.216	ENSMFAG00000039126	GPATCH8	100	88.224	Macaca_fascicularis
ENSRNOG00000021044	Gpatch8	100	86.120	ENSMMUG00000012658	GPATCH8	100	88.224	Macaca_mulatta
ENSRNOG00000021044	Gpatch8	100	87.763	ENSMNEG00000031426	GPATCH8	100	88.224	Macaca_nemestrina
ENSRNOG00000021044	Gpatch8	55	85.216	ENSMLEG00000038860	GPATCH8	100	88.224	Mandrillus_leucophaeus
ENSRNOG00000021044	Gpatch8	100	90.957	ENSMAUG00000021770	Gpatch8	100	91.089	Mesocricetus_auratus
ENSRNOG00000021044	Gpatch8	100	87.516	ENSMICG00000028586	GPATCH8	100	85.912	Microcebus_murinus
ENSRNOG00000021044	Gpatch8	100	89.057	ENSMOCG00000001658	Gpatch8	55	86.707	Microtus_ochrogaster
ENSRNOG00000021044	Gpatch8	100	92.480	MGP_CAROLIEiJ_G0017255	Gpatch8	100	93.865	Mus_caroli
ENSRNOG00000021044	Gpatch8	100	92.612	ENSMUSG00000034621	Gpatch8	100	93.865	Mus_musculus
ENSRNOG00000021044	Gpatch8	100	94.587	MGP_PahariEiJ_G0018385	Gpatch8	100	95.116	Mus_pahari
ENSRNOG00000021044	Gpatch8	100	93.140	MGP_SPRETEiJ_G0018098	Gpatch8	100	93.865	Mus_spretus
ENSRNOG00000021044	Gpatch8	100	85.855	ENSMPUG00000009274	GPATCH8	100	86.974	Mustela_putorius_furo
ENSRNOG00000021044	Gpatch8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.918	Myotis_lucifugus
ENSRNOG00000021044	Gpatch8	100	90.574	ENSNGAG00000021860	Gpatch8	100	90.508	Nannospalax_galili
ENSRNOG00000021044	Gpatch8	78	72.232	ENSMEUG00000011799	GPATCH8	72	72.328	Notamacropus_eugenii
ENSRNOG00000021044	Gpatch8	100	78.684	ENSOPRG00000008816	GPATCH8	100	79.172	Ochotona_princeps
ENSRNOG00000021044	Gpatch8	100	85.056	ENSOCUG00000003291	GPATCH8	100	85.714	Oryctolagus_cuniculus
ENSRNOG00000021044	Gpatch8	54	62.403	ENSORLG00015019797	gpatch8	62	59.028	Oryzias_latipes_hsok
ENSRNOG00000021044	Gpatch8	97	87.694	ENSOGAG00000033643	GPATCH8	100	85.801	Otolemur_garnettii
ENSRNOG00000021044	Gpatch8	100	81.012	ENSOARG00000008370	GPATCH8	100	82.786	Ovis_aries
ENSRNOG00000021044	Gpatch8	100	87.303	ENSPPAG00000040523	GPATCH8	100	87.763	Pan_paniscus
ENSRNOG00000021044	Gpatch8	100	87.171	ENSPPRG00000023310	GPATCH8	100	87.632	Panthera_pardus
ENSRNOG00000021044	Gpatch8	100	85.526	ENSPTIG00000020001	GPATCH8	100	85.789	Panthera_tigris_altaica
ENSRNOG00000021044	Gpatch8	100	87.368	ENSPTRG00000009278	GPATCH8	100	87.829	Pan_troglodytes
ENSRNOG00000021044	Gpatch8	100	87.697	ENSPANG00000021304	GPATCH8	100	88.158	Papio_anubis
ENSRNOG00000021044	Gpatch8	100	90.897	ENSPEMG00000008337	Gpatch8	100	91.029	Peromyscus_maniculatus_bairdii
ENSRNOG00000021044	Gpatch8	100	86.908	ENSPPYG00000008329	GPATCH8	100	87.368	Pongo_abelii
ENSRNOG00000021044	Gpatch8	60	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSRNOG00000021044	Gpatch8	100	85.385	ENSPCOG00000019209	GPATCH8	100	84.003	Propithecus_coquereli
ENSRNOG00000021044	Gpatch8	100	86.109	ENSPVAG00000003155	GPATCH8	100	86.570	Pteropus_vampyrus
ENSRNOG00000021044	Gpatch8	55	84.976	ENSRBIG00000033713	GPATCH8	100	88.026	Rhinopithecus_bieti
ENSRNOG00000021044	Gpatch8	55	84.976	ENSRROG00000029623	GPATCH8	100	88.026	Rhinopithecus_roxellana
ENSRNOG00000021044	Gpatch8	95	86.546	ENSSBOG00000023544	GPATCH8	100	87.697	Saimiri_boliviensis_boliviensis
ENSRNOG00000021044	Gpatch8	54	80.970	ENSSARG00000007516	GPATCH8	100	83.443	Sorex_araneus
ENSRNOG00000021044	Gpatch8	100	87.508	ENSSSCG00000017357	ITGA2B	100	87.179	Sus_scrofa
ENSRNOG00000021044	Gpatch8	76	95.016	ENSTBEG00000009486	GPATCH8	91	95.016	Tupaia_belangeri
ENSRNOG00000021044	Gpatch8	99	82.614	ENSTTRG00000010527	GPATCH8	100	82.946	Tursiops_truncatus
ENSRNOG00000021044	Gpatch8	91	85.062	ENSVPAG00000006937	GPATCH8	61	81.894	Vicugna_pacos
ENSRNOG00000021044	Gpatch8	100	87.237	ENSVVUG00000017996	GPATCH8	100	87.632	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function