EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000021209 (Gene tree)
Gene ID: 690254
Gene Symbol: Polr3gl
Alias: LOC690254
Full Name: RNA polymerase III subunit G like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 16616 bases
Position: chr2:198702587-198719202
Accession: 1582857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028801	RNA_pol_3_Rpc31	PF11705.8	2.2e-38	1	1
ENSRNOP00000075390	RNA_pol_3_Rpc31	PF11705.8	7e-30	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000085006	-	2045	XM_008761331	ENSRNOP00000075390	213 (aa)	XP_008759553	A0A0G2KAG6
ENSRNOT00000028801	-	1165	-	ENSRNOP00000028801	218 (aa)	-	B4F7D3

Gene Model

Click here to download ENSRNOG00000021209's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03020	RNA polymerase	KEGG
rno04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000021209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000021209	Polr3gl	98	46.696	ENSRNOG00000016260	Polr3g	95	46.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000021209	Polr3gl	100	97.248	ENSMOCG00000001317	Polr3gl	100	97.248	Microtus_ochrogaster
ENSRNOG00000021209	Polr3gl	100	99.541	MGP_CAROLIEiJ_G0025380	Polr3gl	100	99.541	Mus_caroli
ENSRNOG00000021209	Polr3gl	100	99.541	ENSMUSG00000028104	Polr3gl	100	99.541	Mus_musculus
ENSRNOG00000021209	Polr3gl	100	99.083	MGP_PahariEiJ_G0026825	Polr3gl	100	99.083	Mus_pahari
ENSRNOG00000021209	Polr3gl	100	99.541	MGP_SPRETEiJ_G0026327	Polr3gl	100	99.541	Mus_spretus
ENSRNOG00000021209	Polr3gl	99	97.235	ENSPEMG00000014489	Polr3gl	100	97.235	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	-	ISO	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0006383	transcription by RNA polymerase III	-	ISO	Process