EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000021270 (Gene tree)
Gene ID: 311441
Gene Symbol: Trmt6
Alias: LOC311441|RGD1308877
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 11722 bases
Position: chr3:125458692-125470413
Accession: 1308877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028893	Gcd10p	PF04189.13	3.2e-72	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028893	-	2915	-	ENSRNOP00000028893	495 (aa)	-	D3ZVK3

Gene Model

Click here to download ENSRNOG00000021270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000021270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000021270	Trmt6	99	85.830	ENSG00000089195	TRMT6	99	85.830	Homo_sapiens
ENSRNOG00000021270	Trmt6	96	58.193	ENSAPOG00000008036	trmt6	98	58.664	Acanthochromis_polyacanthus
ENSRNOG00000021270	Trmt6	99	86.235	ENSAMEG00000010635	TRMT6	99	86.235	Ailuropoda_melanoleuca
ENSRNOG00000021270	Trmt6	95	55.957	ENSACIG00000004608	trmt6	97	55.485	Amphilophus_citrinellus
ENSRNOG00000021270	Trmt6	96	57.806	ENSAOCG00000024322	trmt6	98	57.442	Amphiprion_ocellaris
ENSRNOG00000021270	Trmt6	96	58.281	ENSAPEG00000017334	trmt6	98	58.071	Amphiprion_percula
ENSRNOG00000021270	Trmt6	91	57.802	ENSATEG00000018498	trmt6	97	59.211	Anabas_testudineus
ENSRNOG00000021270	Trmt6	92	73.856	ENSAPLG00000007761	TRMT6	99	73.856	Anas_platyrhynchos
ENSRNOG00000021270	Trmt6	96	66.806	ENSACAG00000000575	TRMT6	98	66.806	Anolis_carolinensis
ENSRNOG00000021270	Trmt6	99	85.830	ENSANAG00000021260	TRMT6	99	85.830	Aotus_nancymaae
ENSRNOG00000021270	Trmt6	95	55.042	ENSACLG00000026034	trmt6	95	55.042	Astatotilapia_calliptera
ENSRNOG00000021270	Trmt6	96	59.119	ENSAMXG00000017116	trmt6	96	58.787	Astyanax_mexicanus
ENSRNOG00000021270	Trmt6	99	86.061	ENSBTAG00000001314	TRMT6	99	86.061	Bos_taurus
ENSRNOG00000021270	Trmt6	99	85.628	ENSCJAG00000021296	TRMT6	99	85.628	Callithrix_jacchus
ENSRNOG00000021270	Trmt6	98	87.090	ENSCAFG00000005969	TRMT6	99	86.235	Canis_familiaris
ENSRNOG00000021270	Trmt6	98	87.295	ENSCAFG00020000777	TRMT6	99	86.437	Canis_lupus_dingo
ENSRNOG00000021270	Trmt6	99	85.657	ENSCHIG00000010338	TRMT6	99	85.657	Capra_hircus
ENSRNOG00000021270	Trmt6	99	86.235	ENSTSYG00000004286	TRMT6	99	86.235	Carlito_syrichta
ENSRNOG00000021270	Trmt6	83	84.541	ENSCAPG00000015467	TRMT6	93	84.541	Cavia_aperea
ENSRNOG00000021270	Trmt6	99	84.615	ENSCPOG00000013809	TRMT6	99	84.615	Cavia_porcellus
ENSRNOG00000021270	Trmt6	99	85.569	ENSCCAG00000026939	TRMT6	99	85.569	Cebus_capucinus
ENSRNOG00000021270	Trmt6	99	85.628	ENSCATG00000041111	TRMT6	99	85.628	Cercocebus_atys
ENSRNOG00000021270	Trmt6	99	85.830	ENSCLAG00000013978	TRMT6	99	85.830	Chinchilla_lanigera
ENSRNOG00000021270	Trmt6	99	85.628	ENSCSAG00000013461	TRMT6	99	85.628	Chlorocebus_sabaeus
ENSRNOG00000021270	Trmt6	83	75.204	ENSCHOG00000012537	TRMT6	74	75.204	Choloepus_hoffmanni
ENSRNOG00000021270	Trmt6	95	74.059	ENSCPBG00000023406	TRMT6	97	73.278	Chrysemys_picta_bellii
ENSRNOG00000021270	Trmt6	90	35.498	ENSCING00000002472	-	96	34.899	Ciona_intestinalis
ENSRNOG00000021270	Trmt6	87	39.503	ENSCSAVG00000001680	-	94	38.837	Ciona_savignyi
ENSRNOG00000021270	Trmt6	99	85.425	ENSCANG00000002381	TRMT6	99	85.425	Colobus_angolensis_palliatus
ENSRNOG00000021270	Trmt6	99	91.093	ENSCGRG00001003385	Trmt6	99	91.093	Cricetulus_griseus_chok1gshd
ENSRNOG00000021270	Trmt6	99	91.093	ENSCGRG00000006540	Trmt6	99	91.093	Cricetulus_griseus_crigri
ENSRNOG00000021270	Trmt6	96	58.228	ENSCSEG00000002228	trmt6	97	58.351	Cynoglossus_semilaevis
ENSRNOG00000021270	Trmt6	96	56.513	ENSCVAG00000000341	trmt6	98	56.513	Cyprinodon_variegatus
ENSRNOG00000021270	Trmt6	97	57.500	ENSDARG00000042344	trmt6	97	57.500	Danio_rerio
ENSRNOG00000021270	Trmt6	99	79.441	ENSDNOG00000012785	TRMT6	99	79.283	Dasypus_novemcinctus
ENSRNOG00000021270	Trmt6	98	87.321	ENSDORG00000006458	Trmt6	99	87.321	Dipodomys_ordii
ENSRNOG00000021270	Trmt6	60	90.909	ENSETEG00000003490	-	60	90.909	Echinops_telfairi
ENSRNOG00000021270	Trmt6	65	47.368	ENSETEG00000017282	-	95	47.368	Echinops_telfairi
ENSRNOG00000021270	Trmt6	97	86.486	ENSEASG00005001411	TRMT6	99	86.382	Equus_asinus_asinus
ENSRNOG00000021270	Trmt6	97	85.863	ENSECAG00000023914	TRMT6	99	85.425	Equus_caballus
ENSRNOG00000021270	Trmt6	99	83.537	ENSEEUG00000006635	TRMT6	99	83.537	Erinaceus_europaeus
ENSRNOG00000021270	Trmt6	95	58.212	ENSELUG00000013378	trmt6	78	60.222	Esox_lucius
ENSRNOG00000021270	Trmt6	99	86.410	ENSFCAG00000003102	TRMT6	99	86.410	Felis_catus
ENSRNOG00000021270	Trmt6	90	71.903	ENSFALG00000013575	TRMT6	97	72.566	Ficedula_albicollis
ENSRNOG00000021270	Trmt6	99	86.061	ENSFDAG00000015117	TRMT6	99	86.061	Fukomys_damarensis
ENSRNOG00000021270	Trmt6	95	56.900	ENSFHEG00000019957	trmt6	97	56.900	Fundulus_heteroclitus
ENSRNOG00000021270	Trmt6	81	64.961	ENSGMOG00000011059	trmt6	97	60.135	Gadus_morhua
ENSRNOG00000021270	Trmt6	95	71.158	ENSGALG00000009169	TRMT6	97	71.158	Gallus_gallus
ENSRNOG00000021270	Trmt6	96	55.625	ENSGAFG00000008618	trmt6	97	55.625	Gambusia_affinis
ENSRNOG00000021270	Trmt6	96	55.672	ENSGACG00000012471	trmt6	96	55.672	Gasterosteus_aculeatus
ENSRNOG00000021270	Trmt6	95	73.849	ENSGAGG00000008464	TRMT6	98	73.246	Gopherus_agassizii
ENSRNOG00000021270	Trmt6	99	86.032	ENSGGOG00000008597	TRMT6	99	86.032	Gorilla_gorilla
ENSRNOG00000021270	Trmt6	95	55.042	ENSHBUG00000016631	trmt6	96	55.042	Haplochromis_burtoni
ENSRNOG00000021270	Trmt6	99	84.646	ENSHGLG00000015405	TRMT6	99	84.646	Heterocephalus_glaber_female
ENSRNOG00000021270	Trmt6	99	84.646	ENSHGLG00100004120	TRMT6	99	84.646	Heterocephalus_glaber_male
ENSRNOG00000021270	Trmt6	96	58.004	ENSHCOG00000000118	trmt6	97	58.004	Hippocampus_comes
ENSRNOG00000021270	Trmt6	95	60.254	ENSIPUG00000019365	trmt6	97	60.722	Ictalurus_punctatus
ENSRNOG00000021270	Trmt6	99	86.613	ENSSTOG00000006863	TRMT6	99	86.613	Ictidomys_tridecemlineatus
ENSRNOG00000021270	Trmt6	99	84.818	ENSJJAG00000007315	Trmt6	99	84.818	Jaculus_jaculus
ENSRNOG00000021270	Trmt6	95	56.421	ENSKMAG00000001295	trmt6	97	57.962	Kryptolebias_marmoratus
ENSRNOG00000021270	Trmt6	96	56.513	ENSLBEG00000025654	trmt6	97	56.513	Labrus_bergylta
ENSRNOG00000021270	Trmt6	96	67.992	ENSLACG00000016478	TRMT6	96	67.992	Latimeria_chalumnae
ENSRNOG00000021270	Trmt6	96	64.226	ENSLOCG00000016451	trmt6	97	64.226	Lepisosteus_oculatus
ENSRNOG00000021270	Trmt6	99	84.306	ENSLAFG00000032216	TRMT6	99	84.306	Loxodonta_africana
ENSRNOG00000021270	Trmt6	99	85.830	ENSMFAG00000044360	TRMT6	99	85.830	Macaca_fascicularis
ENSRNOG00000021270	Trmt6	99	85.830	ENSMMUG00000013728	TRMT6	99	85.830	Macaca_mulatta
ENSRNOG00000021270	Trmt6	99	85.628	ENSMNEG00000041831	TRMT6	99	85.628	Macaca_nemestrina
ENSRNOG00000021270	Trmt6	99	85.830	ENSMLEG00000040762	TRMT6	99	85.830	Mandrillus_leucophaeus
ENSRNOG00000021270	Trmt6	96	56.707	ENSMAMG00000012101	trmt6	98	59.213	Mastacembelus_armatus
ENSRNOG00000021270	Trmt6	95	55.042	ENSMZEG00005010771	trmt6	95	55.042	Maylandia_zebra
ENSRNOG00000021270	Trmt6	95	71.579	ENSMGAG00000007678	TRMT6	96	71.579	Meleagris_gallopavo
ENSRNOG00000021270	Trmt6	99	91.903	ENSMAUG00000008719	Trmt6	99	91.903	Mesocricetus_auratus
ENSRNOG00000021270	Trmt6	96	86.042	ENSMICG00000011626	TRMT6	99	85.425	Microcebus_murinus
ENSRNOG00000021270	Trmt6	99	90.891	ENSMOCG00000022320	Trmt6	99	90.891	Microtus_ochrogaster
ENSRNOG00000021270	Trmt6	89	57.919	ENSMMOG00000004412	trmt6	92	57.919	Mola_mola
ENSRNOG00000021270	Trmt6	97	75.258	ENSMODG00000003784	TRMT6	97	75.258	Monodelphis_domestica
ENSRNOG00000021270	Trmt6	96	54.526	ENSMALG00000018140	trmt6	96	54.316	Monopterus_albus
ENSRNOG00000021270	Trmt6	100	92.958	MGP_CAROLIEiJ_G0024344	Trmt6	100	92.958	Mus_caroli
ENSRNOG00000021270	Trmt6	100	93.360	ENSMUSG00000037376	Trmt6	100	93.360	Mus_musculus
ENSRNOG00000021270	Trmt6	100	93.763	MGP_PahariEiJ_G0025789	Trmt6	100	93.763	Mus_pahari
ENSRNOG00000021270	Trmt6	100	93.360	MGP_SPRETEiJ_G0025264	Trmt6	100	93.360	Mus_spretus
ENSRNOG00000021270	Trmt6	86	85.581	ENSMPUG00000006317	TRMT6	92	85.581	Mustela_putorius_furo
ENSRNOG00000021270	Trmt6	97	85.863	ENSMLUG00000006491	TRMT6	99	85.223	Myotis_lucifugus
ENSRNOG00000021270	Trmt6	99	86.263	ENSNGAG00000015251	Trmt6	99	86.263	Nannospalax_galili
ENSRNOG00000021270	Trmt6	95	53.390	ENSNBRG00000020261	trmt6	96	53.390	Neolamprologus_brichardi
ENSRNOG00000021270	Trmt6	99	85.628	ENSNLEG00000013957	TRMT6	99	85.628	Nomascus_leucogenys
ENSRNOG00000021270	Trmt6	84	76.611	ENSMEUG00000009179	TRMT6	99	76.611	Notamacropus_eugenii
ENSRNOG00000021270	Trmt6	98	83.027	ENSOPRG00000008564	TRMT6	99	83.027	Ochotona_princeps
ENSRNOG00000021270	Trmt6	99	85.425	ENSODEG00000005657	TRMT6	99	85.425	Octodon_degus
ENSRNOG00000021270	Trmt6	95	57.717	ENSONIG00000000968	trmt6	96	57.717	Oreochromis_niloticus
ENSRNOG00000021270	Trmt6	91	76.703	ENSOANG00000008403	-	99	76.703	Ornithorhynchus_anatinus
ENSRNOG00000021270	Trmt6	99	86.032	ENSOCUG00000014669	TRMT6	99	86.032	Oryctolagus_cuniculus
ENSRNOG00000021270	Trmt6	95	55.346	ENSORLG00000009862	trmt6	97	55.346	Oryzias_latipes
ENSRNOG00000021270	Trmt6	95	55.649	ENSORLG00020001466	trmt6	97	55.649	Oryzias_latipes_hni
ENSRNOG00000021270	Trmt6	95	53.535	ENSORLG00015015552	trmt6	97	55.556	Oryzias_latipes_hsok
ENSRNOG00000021270	Trmt6	96	53.878	ENSOMEG00000019874	trmt6	97	54.507	Oryzias_melastigma
ENSRNOG00000021270	Trmt6	97	84.647	ENSOGAG00000012950	TRMT6	98	84.178	Otolemur_garnettii
ENSRNOG00000021270	Trmt6	99	86.061	ENSOARG00000017993	TRMT6	99	86.061	Ovis_aries
ENSRNOG00000021270	Trmt6	99	85.253	ENSPPAG00000036809	TRMT6	99	85.253	Pan_paniscus
ENSRNOG00000021270	Trmt6	99	86.613	ENSPPRG00000000424	TRMT6	99	86.613	Panthera_pardus
ENSRNOG00000021270	Trmt6	99	86.613	ENSPTIG00000010629	TRMT6	99	86.613	Panthera_tigris_altaica
ENSRNOG00000021270	Trmt6	99	85.830	ENSPTRG00000013231	TRMT6	99	85.830	Pan_troglodytes
ENSRNOG00000021270	Trmt6	99	85.830	ENSPANG00000009284	TRMT6	99	85.830	Papio_anubis
ENSRNOG00000021270	Trmt6	96	61.134	ENSPKIG00000003441	trmt6	97	61.134	Paramormyrops_kingsleyae
ENSRNOG00000021270	Trmt6	95	71.816	ENSPSIG00000017048	TRMT6	97	71.816	Pelodiscus_sinensis
ENSRNOG00000021270	Trmt6	89	58.730	ENSPMGG00000021074	trmt6	92	59.864	Periophthalmus_magnuspinnatus
ENSRNOG00000021270	Trmt6	97	91.684	ENSPEMG00000023268	Trmt6	99	90.726	Peromyscus_maniculatus_bairdii
ENSRNOG00000021270	Trmt6	99	75.506	ENSPCIG00000001546	TRMT6	96	75.506	Phascolarctos_cinereus
ENSRNOG00000021270	Trmt6	96	56.198	ENSPFOG00000003037	trmt6	97	56.198	Poecilia_formosa
ENSRNOG00000021270	Trmt6	96	56.639	ENSPLAG00000005143	trmt6	97	56.639	Poecilia_latipinna
ENSRNOG00000021270	Trmt6	96	56.639	ENSPMEG00000014875	trmt6	97	56.639	Poecilia_mexicana
ENSRNOG00000021270	Trmt6	96	54.219	ENSPREG00000016227	trmt6	96	54.430	Poecilia_reticulata
ENSRNOG00000021270	Trmt6	99	86.032	ENSPPYG00000010691	TRMT6	99	86.032	Pongo_abelii
ENSRNOG00000021270	Trmt6	99	82.485	ENSPCAG00000012098	TRMT6	99	82.485	Procavia_capensis
ENSRNOG00000021270	Trmt6	97	86.100	ENSPCOG00000020723	TRMT6	99	85.657	Propithecus_coquereli
ENSRNOG00000021270	Trmt6	99	81.504	ENSPVAG00000007539	TRMT6	99	81.504	Pteropus_vampyrus
ENSRNOG00000021270	Trmt6	95	55.789	ENSPNYG00000000918	trmt6	97	55.789	Pundamilia_nyererei
ENSRNOG00000021270	Trmt6	96	59.916	ENSPNAG00000019279	trmt6	96	59.916	Pygocentrus_nattereri
ENSRNOG00000021270	Trmt6	99	84.615	ENSRBIG00000031132	TRMT6	99	84.615	Rhinopithecus_bieti
ENSRNOG00000021270	Trmt6	99	85.830	ENSRROG00000045329	TRMT6	99	85.830	Rhinopithecus_roxellana
ENSRNOG00000021270	Trmt6	84	84.450	ENSSBOG00000019803	-	99	84.450	Saimiri_boliviensis_boliviensis
ENSRNOG00000021270	Trmt6	99	85.628	ENSSBOG00000033602	-	99	85.628	Saimiri_boliviensis_boliviensis
ENSRNOG00000021270	Trmt6	99	75.153	ENSSHAG00000010754	TRMT6	96	75.153	Sarcophilus_harrisii
ENSRNOG00000021270	Trmt6	96	64.108	ENSSFOG00015008429	trmt6	97	64.108	Scleropages_formosus
ENSRNOG00000021270	Trmt6	96	57.233	ENSSMAG00000005352	trmt6	97	57.773	Scophthalmus_maximus
ENSRNOG00000021270	Trmt6	96	58.228	ENSSDUG00000008294	trmt6	97	59.283	Seriola_dumerili
ENSRNOG00000021270	Trmt6	96	58.650	ENSSLDG00000002180	trmt6	97	59.705	Seriola_lalandi_dorsalis
ENSRNOG00000021270	Trmt6	97	80.457	ENSSARG00000005487	TRMT6	99	79.352	Sorex_araneus
ENSRNOG00000021270	Trmt6	96	58.613	ENSSPAG00000011628	trmt6	97	58.824	Stegastes_partitus
ENSRNOG00000021270	Trmt6	98	85.918	ENSSSCG00000007046	TRMT6	71	85.918	Sus_scrofa
ENSRNOG00000021270	Trmt6	95	71.158	ENSTGUG00000002195	TRMT6	97	72.000	Taeniopygia_guttata
ENSRNOG00000021270	Trmt6	95	54.757	ENSTRUG00000007153	trmt6	97	54.757	Takifugu_rubripes
ENSRNOG00000021270	Trmt6	95	58.038	ENSTNIG00000010726	TRMT6	96	58.038	Tetraodon_nigroviridis
ENSRNOG00000021270	Trmt6	76	88.387	ENSTBEG00000016317	TRMT6	75	88.387	Tupaia_belangeri
ENSRNOG00000021270	Trmt6	99	85.425	ENSTTRG00000012889	TRMT6	99	85.425	Tursiops_truncatus
ENSRNOG00000021270	Trmt6	99	86.032	ENSUAMG00000008674	TRMT6	99	86.032	Ursus_americanus
ENSRNOG00000021270	Trmt6	99	86.032	ENSUMAG00000004999	TRMT6	99	86.032	Ursus_maritimus
ENSRNOG00000021270	Trmt6	99	84.369	ENSVPAG00000002371	TRMT6	99	84.708	Vicugna_pacos
ENSRNOG00000021270	Trmt6	98	87.295	ENSVVUG00000023370	TRMT6	99	86.437	Vulpes_vulpes
ENSRNOG00000021270	Trmt6	96	65.281	ENSXETG00000004501	trmt6	98	65.281	Xenopus_tropicalis
ENSRNOG00000021270	Trmt6	96	52.743	ENSXCOG00000007761	trmt6	97	52.532	Xiphophorus_couchianus
ENSRNOG00000021270	Trmt6	96	56.092	ENSXMAG00000008592	trmt6	97	56.092	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	-	IEA	Process
GO:0031515	tRNA (m1A) methyltransferase complex	21873635.	IBA	Component
GO:0080009	mRNA methylation	-	IEA	Process
GO:0080009	mRNA methylation	-	ISO	Process