EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000021637 (Gene tree)
Gene ID: 245957
Gene Symbol: Ddx46
Alias: LOC245957
Full Name: DEAD-box helicase 46
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 44058 bases
Position: chr17:9475538-9519595
Accession: 708480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000030772	DEAD	PF00270.29	9.9e-51	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000029885	-	3614	XM_006253601	ENSRNOP00000030772	1032 (aa)	XP_006253663	Q62780

Gene Model

Click here to download ENSRNOG00000021637's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000021637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000021637	Ddx46	100	98.740	ENSG00000145833	DDX46	99	100.000	Homo_sapiens
ENSRNOG00000021637	Ddx46	86	85.169	ENSAPOG00000000193	ddx46	95	81.876	Acanthochromis_polyacanthus
ENSRNOG00000021637	Ddx46	100	98.643	ENSAMEG00000017873	DDX46	100	98.643	Ailuropoda_melanoleuca
ENSRNOG00000021637	Ddx46	86	83.796	ENSACIG00000013235	ddx46	90	84.018	Amphilophus_citrinellus
ENSRNOG00000021637	Ddx46	90	80.185	ENSAOCG00000007758	ddx46	91	80.658	Amphiprion_ocellaris
ENSRNOG00000021637	Ddx46	90	80.287	ENSAPEG00000022648	ddx46	91	80.761	Amphiprion_percula
ENSRNOG00000021637	Ddx46	86	80.786	ENSATEG00000012998	ddx46	91	81.478	Anabas_testudineus
ENSRNOG00000021637	Ddx46	89	92.108	ENSAPLG00000013208	DDX46	89	92.199	Anas_platyrhynchos
ENSRNOG00000021637	Ddx46	85	92.054	ENSACAG00000001437	DDX46	100	92.054	Anolis_carolinensis
ENSRNOG00000021637	Ddx46	100	98.643	ENSANAG00000032116	DDX46	100	98.643	Aotus_nancymaae
ENSRNOG00000021637	Ddx46	86	85.198	ENSACLG00000014804	ddx46	92	85.327	Astatotilapia_calliptera
ENSRNOG00000021637	Ddx46	86	83.243	ENSAMXG00000008413	ddx46	89	81.678	Astyanax_mexicanus
ENSRNOG00000021637	Ddx46	100	98.643	ENSBTAG00000021520	DDX46	100	98.643	Bos_taurus
ENSRNOG00000021637	Ddx46	100	98.643	ENSCJAG00000005697	DDX46	100	98.643	Callithrix_jacchus
ENSRNOG00000021637	Ddx46	100	98.740	ENSCAFG00000001048	DDX46	100	98.740	Canis_familiaris
ENSRNOG00000021637	Ddx46	100	98.643	ENSCAFG00020006070	DDX46	100	98.643	Canis_lupus_dingo
ENSRNOG00000021637	Ddx46	100	98.740	ENSCHIG00000026009	DDX46	100	98.740	Capra_hircus
ENSRNOG00000021637	Ddx46	96	98.790	ENSTSYG00000003177	DDX46	100	98.790	Carlito_syrichta
ENSRNOG00000021637	Ddx46	100	98.837	ENSCPOG00000011362	DDX46	100	98.837	Cavia_porcellus
ENSRNOG00000021637	Ddx46	100	98.643	ENSCCAG00000026721	DDX46	100	98.643	Cebus_capucinus
ENSRNOG00000021637	Ddx46	100	94.574	ENSCATG00000040891	DDX46	100	94.574	Cercocebus_atys
ENSRNOG00000021637	Ddx46	100	98.837	ENSCLAG00000014581	DDX46	100	98.837	Chinchilla_lanigera
ENSRNOG00000021637	Ddx46	80	77.630	ENSCHOG00000005683	DDX46	80	77.384	Choloepus_hoffmanni
ENSRNOG00000021637	Ddx46	85	93.076	ENSCPBG00000008261	DDX46	96	93.076	Chrysemys_picta_bellii
ENSRNOG00000021637	Ddx46	86	67.259	ENSCING00000006813	-	100	73.174	Ciona_intestinalis
ENSRNOG00000021637	Ddx46	89	65.767	ENSCSAVG00000002353	-	97	77.083	Ciona_savignyi
ENSRNOG00000021637	Ddx46	60	99.692	ENSCANG00000014766	DDX46	100	99.692	Colobus_angolensis_palliatus
ENSRNOG00000021637	Ddx46	99	98.727	ENSCGRG00001024140	Ddx46	99	98.727	Cricetulus_griseus_chok1gshd
ENSRNOG00000021637	Ddx46	99	99.318	ENSCGRG00000005152	Ddx46	100	99.318	Cricetulus_griseus_crigri
ENSRNOG00000021637	Ddx46	86	81.957	ENSCSEG00000016886	ddx46	94	80.978	Cynoglossus_semilaevis
ENSRNOG00000021637	Ddx46	86	84.479	ENSCVAG00000022900	ddx46	93	83.796	Cyprinodon_variegatus
ENSRNOG00000021637	Ddx46	100	98.159	ENSDNOG00000011448	DDX46	100	98.159	Dasypus_novemcinctus
ENSRNOG00000021637	Ddx46	90	90.821	ENSDORG00000005447	Ddx46	86	93.318	Dipodomys_ordii
ENSRNOG00000021637	Ddx46	79	89.220	ENSETEG00000018455	DDX46	78	89.327	Echinops_telfairi
ENSRNOG00000021637	Ddx46	98	94.960	ENSEASG00005020329	DDX46	100	94.960	Equus_asinus_asinus
ENSRNOG00000021637	Ddx46	100	98.643	ENSECAG00000018217	DDX46	100	98.643	Equus_caballus
ENSRNOG00000021637	Ddx46	56	75.217	ENSEEUG00000003602	-	67	75.217	Erinaceus_europaeus
ENSRNOG00000021637	Ddx46	86	83.850	ENSELUG00000000817	ddx46	93	83.407	Esox_lucius
ENSRNOG00000021637	Ddx46	100	98.450	ENSFCAG00000026229	DDX46	100	98.450	Felis_catus
ENSRNOG00000021637	Ddx46	85	93.750	ENSFALG00000007947	DDX46	100	93.750	Ficedula_albicollis
ENSRNOG00000021637	Ddx46	100	98.837	ENSFDAG00000021262	DDX46	100	98.837	Fukomys_damarensis
ENSRNOG00000021637	Ddx46	86	82.431	ENSFHEG00000020055	ddx46	93	82.762	Fundulus_heteroclitus
ENSRNOG00000021637	Ddx46	89	82.736	ENSGMOG00000007990	ddx46	91	81.976	Gadus_morhua
ENSRNOG00000021637	Ddx46	90	91.817	ENSGALG00000006404	DDX46	90	91.979	Gallus_gallus
ENSRNOG00000021637	Ddx46	86	78.194	ENSGAFG00000007153	ddx46	91	78.073	Gambusia_affinis
ENSRNOG00000021637	Ddx46	89	83.660	ENSGACG00000000166	ddx46	91	83.007	Gasterosteus_aculeatus
ENSRNOG00000021637	Ddx46	90	91.872	ENSGAGG00000014910	DDX46	90	92.134	Gopherus_agassizii
ENSRNOG00000021637	Ddx46	100	98.643	ENSGGOG00000013843	DDX46	100	98.643	Gorilla_gorilla
ENSRNOG00000021637	Ddx46	86	85.520	ENSHBUG00000021074	ddx46	92	85.520	Haplochromis_burtoni
ENSRNOG00000021637	Ddx46	100	98.740	ENSHGLG00000010455	DDX46	100	98.740	Heterocephalus_glaber_female
ENSRNOG00000021637	Ddx46	100	98.740	ENSHGLG00100016515	DDX46	100	98.740	Heterocephalus_glaber_male
ENSRNOG00000021637	Ddx46	100	76.664	ENSIPUG00000002564	ddx46	90	82.304	Ictalurus_punctatus
ENSRNOG00000021637	Ddx46	65	99.400	ENSSTOG00000025564	DDX46	75	99.391	Ictidomys_tridecemlineatus
ENSRNOG00000021637	Ddx46	100	98.256	ENSJJAG00000013906	Ddx46	100	98.256	Jaculus_jaculus
ENSRNOG00000021637	Ddx46	90	79.324	ENSKMAG00000019510	ddx46	87	82.825	Kryptolebias_marmoratus
ENSRNOG00000021637	Ddx46	90	78.359	ENSLBEG00000027425	ddx46	94	80.811	Labrus_bergylta
ENSRNOG00000021637	Ddx46	100	87.694	ENSLACG00000007965	DDX46	89	90.228	Latimeria_chalumnae
ENSRNOG00000021637	Ddx46	89	85.744	ENSLOCG00000010169	ddx46	87	87.692	Lepisosteus_oculatus
ENSRNOG00000021637	Ddx46	100	98.354	ENSLAFG00000010465	DDX46	100	98.354	Loxodonta_africana
ENSRNOG00000021637	Ddx46	100	98.740	ENSMFAG00000044528	DDX46	100	98.740	Macaca_fascicularis
ENSRNOG00000021637	Ddx46	96	98.384	ENSMMUG00000012463	DDX46	96	98.384	Macaca_mulatta
ENSRNOG00000021637	Ddx46	100	98.643	ENSMNEG00000029903	DDX46	100	98.643	Macaca_nemestrina
ENSRNOG00000021637	Ddx46	100	98.643	ENSMLEG00000033516	DDX46	100	98.643	Mandrillus_leucophaeus
ENSRNOG00000021637	Ddx46	86	85.730	ENSMAMG00000021755	ddx46	87	86.070	Mastacembelus_armatus
ENSRNOG00000021637	Ddx46	86	85.198	ENSMZEG00005008989	ddx46	92	85.327	Maylandia_zebra
ENSRNOG00000021637	Ddx46	90	92.988	ENSMGAG00000008226	DDX46	90	93.160	Meleagris_gallopavo
ENSRNOG00000021637	Ddx46	99	99.022	ENSMAUG00000003267	Ddx46	100	99.022	Mesocricetus_auratus
ENSRNOG00000021637	Ddx46	100	94.186	ENSMICG00000028626	DDX46	100	94.186	Microcebus_murinus
ENSRNOG00000021637	Ddx46	98	91.544	ENSMOCG00000012141	Ddx46	99	91.544	Microtus_ochrogaster
ENSRNOG00000021637	Ddx46	86	85.164	ENSMMOG00000013470	ddx46	91	85.391	Mola_mola
ENSRNOG00000021637	Ddx46	100	96.124	ENSMODG00000014331	DDX46	89	96.091	Monodelphis_domestica
ENSRNOG00000021637	Ddx46	86	84.123	ENSMALG00000016796	ddx46	92	83.241	Monopterus_albus
ENSRNOG00000021637	Ddx46	100	99.322	MGP_CAROLIEiJ_G0018573	Ddx46	100	99.322	Mus_caroli
ENSRNOG00000021637	Ddx46	100	99.419	ENSMUSG00000021500	Ddx46	100	99.419	Mus_musculus
ENSRNOG00000021637	Ddx46	100	99.322	MGP_PahariEiJ_G0019638	Ddx46	100	99.322	Mus_pahari
ENSRNOG00000021637	Ddx46	100	99.419	MGP_SPRETEiJ_G0019453	Ddx46	100	99.419	Mus_spretus
ENSRNOG00000021637	Ddx46	100	98.643	ENSMPUG00000010045	DDX46	100	98.643	Mustela_putorius_furo
ENSRNOG00000021637	Ddx46	100	98.258	ENSMLUG00000012607	DDX46	100	98.258	Myotis_lucifugus
ENSRNOG00000021637	Ddx46	94	98.653	ENSNGAG00000020157	Ddx46	97	98.653	Nannospalax_galili
ENSRNOG00000021637	Ddx46	86	85.391	ENSNBRG00000008155	ddx46	92	85.520	Neolamprologus_brichardi
ENSRNOG00000021637	Ddx46	100	98.740	ENSNLEG00000008167	DDX46	100	98.740	Nomascus_leucogenys
ENSRNOG00000021637	Ddx46	64	95.909	ENSMEUG00000014890	-	60	95.929	Notamacropus_eugenii
ENSRNOG00000021637	Ddx46	100	97.190	ENSOPRG00000006646	DDX46	100	97.190	Ochotona_princeps
ENSRNOG00000021637	Ddx46	99	98.735	ENSODEG00000010023	DDX46	100	98.735	Octodon_degus
ENSRNOG00000021637	Ddx46	100	80.580	ENSONIG00000017282	ddx46	90	83.117	Oreochromis_niloticus
ENSRNOG00000021637	Ddx46	90	93.434	ENSOANG00000001842	DDX46	96	93.709	Ornithorhynchus_anatinus
ENSRNOG00000021637	Ddx46	100	98.064	ENSOCUG00000012206	DDX46	100	98.064	Oryctolagus_cuniculus
ENSRNOG00000021637	Ddx46	86	83.352	ENSORLG00000000903	ddx46	93	83.667	Oryzias_latipes
ENSRNOG00000021637	Ddx46	86	83.352	ENSORLG00020022093	ddx46	93	83.667	Oryzias_latipes_hni
ENSRNOG00000021637	Ddx46	86	83.352	ENSORLG00015007282	ddx46	93	83.667	Oryzias_latipes_hsok
ENSRNOG00000021637	Ddx46	90	79.179	ENSOMEG00000003338	ddx46	94	83.150	Oryzias_melastigma
ENSRNOG00000021637	Ddx46	90	88.052	ENSOGAG00000011690	-	89	88.203	Otolemur_garnettii
ENSRNOG00000021637	Ddx46	100	96.415	ENSOGAG00000034921	-	100	96.415	Otolemur_garnettii
ENSRNOG00000021637	Ddx46	100	98.645	ENSOARG00000014348	DDX46	100	98.645	Ovis_aries
ENSRNOG00000021637	Ddx46	100	98.643	ENSPPAG00000037804	DDX46	100	98.643	Pan_paniscus
ENSRNOG00000021637	Ddx46	100	98.450	ENSPPRG00000010743	DDX46	100	98.450	Panthera_pardus
ENSRNOG00000021637	Ddx46	100	98.159	ENSPTIG00000012382	DDX46	99	98.159	Panthera_tigris_altaica
ENSRNOG00000021637	Ddx46	100	98.643	ENSPTRG00000017248	DDX46	100	98.643	Pan_troglodytes
ENSRNOG00000021637	Ddx46	90	93.959	ENSPANG00000025084	DDX46	98	88.932	Papio_anubis
ENSRNOG00000021637	Ddx46	100	79.793	ENSPKIG00000010351	ddx46	90	85.128	Paramormyrops_kingsleyae
ENSRNOG00000021637	Ddx46	90	92.374	ENSPSIG00000004522	DDX46	90	92.565	Pelodiscus_sinensis
ENSRNOG00000021637	Ddx46	100	99.419	ENSPEMG00000013593	Ddx46	100	99.419	Peromyscus_maniculatus_bairdii
ENSRNOG00000021637	Ddx46	86	76.820	ENSPMAG00000007922	ddx46	86	75.924	Petromyzon_marinus
ENSRNOG00000021637	Ddx46	99	89.749	ENSPCIG00000009215	DDX46	100	97.022	Phascolarctos_cinereus
ENSRNOG00000021637	Ddx46	86	81.176	ENSPFOG00000004966	ddx46	87	80.856	Poecilia_formosa
ENSRNOG00000021637	Ddx46	87	82.073	ENSPLAG00000023562	ddx46	90	83.187	Poecilia_latipinna
ENSRNOG00000021637	Ddx46	88	83.168	ENSPMEG00000013401	ddx46	94	81.124	Poecilia_mexicana
ENSRNOG00000021637	Ddx46	86	81.857	ENSPREG00000005444	ddx46	87	81.323	Poecilia_reticulata
ENSRNOG00000021637	Ddx46	90	86.717	ENSPPYG00000015792	DDX46	69	95.175	Pongo_abelii
ENSRNOG00000021637	Ddx46	86	96.644	ENSPCAG00000012364	DDX46	86	96.644	Procavia_capensis
ENSRNOG00000021637	Ddx46	71	96.429	ENSPCOG00000018969	DDX46	94	83.824	Propithecus_coquereli
ENSRNOG00000021637	Ddx46	100	97.190	ENSPVAG00000015655	DDX46	100	97.190	Pteropus_vampyrus
ENSRNOG00000021637	Ddx46	86	84.104	ENSPNYG00000012327	ddx46	92	84.104	Pundamilia_nyererei
ENSRNOG00000021637	Ddx46	84	84.512	ENSPNAG00000010806	ddx46	86	84.702	Pygocentrus_nattereri
ENSRNOG00000021637	Ddx46	81	98.913	ENSRBIG00000041150	DDX46	69	95.104	Rhinopithecus_bieti
ENSRNOG00000021637	Ddx46	100	98.643	ENSRROG00000029467	DDX46	100	98.643	Rhinopithecus_roxellana
ENSRNOG00000021637	Ddx46	100	73.159	ENSSBOG00000027666	DDX46	99	73.159	Saimiri_boliviensis_boliviensis
ENSRNOG00000021637	Ddx46	100	96.124	ENSSHAG00000014408	DDX46	80	96.091	Sarcophilus_harrisii
ENSRNOG00000021637	Ddx46	90	81.799	ENSSFOG00015020093	ddx46	93	84.279	Scleropages_formosus
ENSRNOG00000021637	Ddx46	86	84.146	ENSSMAG00000007229	ddx46	89	83.370	Scophthalmus_maximus
ENSRNOG00000021637	Ddx46	86	85.407	ENSSDUG00000020991	ddx46	92	85.407	Seriola_dumerili
ENSRNOG00000021637	Ddx46	86	85.277	ENSSLDG00000016854	ddx46	92	85.277	Seriola_lalandi_dorsalis
ENSRNOG00000021637	Ddx46	86	91.290	ENSSARG00000011073	DDX46	100	91.290	Sorex_araneus
ENSRNOG00000021637	Ddx46	86	91.807	ENSSPUG00000008985	DDX46	100	92.742	Sphenodon_punctatus
ENSRNOG00000021637	Ddx46	91	80.000	ENSSPAG00000017946	ddx46	90	83.978	Stegastes_partitus
ENSRNOG00000021637	Ddx46	100	98.547	ENSSSCG00000026644	DDX46	100	98.547	Sus_scrofa
ENSRNOG00000021637	Ddx46	90	93.333	ENSTGUG00000001260	-	90	93.420	Taeniopygia_guttata
ENSRNOG00000021637	Ddx46	88	88.889	ENSTRUG00000008878	ddx46	91	78.738	Takifugu_rubripes
ENSRNOG00000021637	Ddx46	86	84.719	ENSTNIG00000016100	ddx46	87	84.944	Tetraodon_nigroviridis
ENSRNOG00000021637	Ddx46	81	100.000	ENSTBEG00000002799	DDX46	81	100.000	Tupaia_belangeri
ENSRNOG00000021637	Ddx46	100	91.667	ENSTTRG00000016869	DDX46	100	91.667	Tursiops_truncatus
ENSRNOG00000021637	Ddx46	100	96.027	ENSUMAG00000017446	DDX46	100	96.027	Ursus_maritimus
ENSRNOG00000021637	Ddx46	90	95.464	ENSVPAG00000001591	DDX46	89	95.548	Vicugna_pacos
ENSRNOG00000021637	Ddx46	100	98.740	ENSVVUG00000017549	DDX46	100	98.740	Vulpes_vulpes
ENSRNOG00000021637	Ddx46	89	87.324	ENSXETG00000010405	ddx46	89	87.554	Xenopus_tropicalis
ENSRNOG00000021637	Ddx46	88	86.207	ENSXCOG00000004162	ddx46	94	79.568	Xiphophorus_couchianus
ENSRNOG00000021637	Ddx46	92	80.415	ENSXMAG00000008312	ddx46	95	83.721	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	7797571.	IDA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0015030	Cajal body	-	IEA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component