EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000021680 (Gene tree)
Gene ID: 100361710
Gene Symbol: Setdb2
Alias: LOC100361710|LOC305931
Full Name: SET domain%2C bifurcated 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 29243 bases
Position: chr15:39712861-39742103
Accession: 2319564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065027	MBD	PF01429.19	2.4e-07	1	1
ENSRNOP00000036240	MBD	PF01429.19	2.6e-07	1	1
ENSRNOP00000066366	MBD	PF01429.19	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074587	-	2145	-	ENSRNOP00000066366	714 (aa)	-	M0RA29
ENSRNOT00000071919	-	2028	-	ENSRNOP00000065027	675 (aa)	-	M0R6H5
ENSRNOT00000036781	-	2094	-	ENSRNOP00000036240	697 (aa)	XP_017455377	D3ZDZ9

Gene Model

Click here to download ENSRNOG00000021680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000021680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000021680	Setdb2	100	67.893	ENSG00000136169	SETDB2	100	67.893	Homo_sapiens
ENSRNOG00000021680	Setdb2	60	47.059	ENSAPOG00000020220	-	93	47.059	Acanthochromis_polyacanthus
ENSRNOG00000021680	Setdb2	98	66.618	ENSAMEG00000003443	SETDB2	69	66.618	Ailuropoda_melanoleuca
ENSRNOG00000021680	Setdb2	74	56.579	ENSACIG00000009349	-	85	56.579	Amphilophus_citrinellus
ENSRNOG00000021680	Setdb2	77	40.136	ENSAOCG00000006560	-	96	40.136	Amphiprion_ocellaris
ENSRNOG00000021680	Setdb2	55	41.353	ENSAPEG00000009529	-	78	40.559	Amphiprion_percula
ENSRNOG00000021680	Setdb2	52	54.118	ENSATEG00000008915	-	76	54.118	Anabas_testudineus
ENSRNOG00000021680	Setdb2	99	45.621	ENSAPLG00000009061	SETDB2	100	45.621	Anas_platyrhynchos
ENSRNOG00000021680	Setdb2	100	42.737	ENSACAG00000014036	SETDB2	100	42.737	Anolis_carolinensis
ENSRNOG00000021680	Setdb2	93	67.033	ENSANAG00000028107	SETDB2	100	67.033	Aotus_nancymaae
ENSRNOG00000021680	Setdb2	81	38.194	ENSACLG00000004046	-	89	38.194	Astatotilapia_calliptera
ENSRNOG00000021680	Setdb2	70	59.140	ENSAMXG00000016092	setdb2	80	59.140	Astyanax_mexicanus
ENSRNOG00000021680	Setdb2	100	63.404	ENSBTAG00000007329	SETDB2	100	63.404	Bos_taurus
ENSRNOG00000021680	Setdb2	100	67.468	ENSCJAG00000008864	SETDB2	100	67.468	Callithrix_jacchus
ENSRNOG00000021680	Setdb2	99	64.466	ENSCAFG00000004341	SETDB2	100	64.466	Canis_familiaris
ENSRNOG00000021680	Setdb2	100	65.390	ENSCAFG00020020283	SETDB2	100	65.390	Canis_lupus_dingo
ENSRNOG00000021680	Setdb2	100	63.932	ENSCHIG00000014895	SETDB2	100	63.932	Capra_hircus
ENSRNOG00000021680	Setdb2	99	65.957	ENSTSYG00000014051	SETDB2	99	65.957	Carlito_syrichta
ENSRNOG00000021680	Setdb2	66	63.067	ENSCAPG00000014168	-	98	63.067	Cavia_aperea
ENSRNOG00000021680	Setdb2	92	62.117	ENSCPOG00000002194	SETDB2	97	62.117	Cavia_porcellus
ENSRNOG00000021680	Setdb2	100	67.468	ENSCCAG00000031604	SETDB2	100	67.468	Cebus_capucinus
ENSRNOG00000021680	Setdb2	100	66.902	ENSCATG00000002055	SETDB2	100	66.902	Cercocebus_atys
ENSRNOG00000021680	Setdb2	100	63.791	ENSCLAG00000007348	SETDB2	100	63.791	Chinchilla_lanigera
ENSRNOG00000021680	Setdb2	100	67.327	ENSCSAG00000017713	SETDB2	100	67.327	Chlorocebus_sabaeus
ENSRNOG00000021680	Setdb2	93	43.388	ENSCPBG00000008524	SETDB2	92	42.948	Chrysemys_picta_bellii
ENSRNOG00000021680	Setdb2	99	62.657	ENSCANG00000033506	SETDB2	100	62.657	Colobus_angolensis_palliatus
ENSRNOG00000021680	Setdb2	100	80.516	ENSCGRG00001011194	Setdb2	100	80.516	Cricetulus_griseus_chok1gshd
ENSRNOG00000021680	Setdb2	100	80.516	ENSCGRG00000000801	Setdb2	100	80.516	Cricetulus_griseus_crigri
ENSRNOG00000021680	Setdb2	77	52.809	ENSCVAG00000004116	-	87	54.651	Cyprinodon_variegatus
ENSRNOG00000021680	Setdb2	59	60.938	ENSDARG00000101462	setdb2	71	60.938	Danio_rerio
ENSRNOG00000021680	Setdb2	100	63.282	ENSDNOG00000033679	SETDB2	100	63.282	Dasypus_novemcinctus
ENSRNOG00000021680	Setdb2	99	64.085	ENSDORG00000026163	Setdb2	100	64.085	Dipodomys_ordii
ENSRNOG00000021680	Setdb2	81	67.593	ENSETEG00000004821	SETDB2	81	67.593	Echinops_telfairi
ENSRNOG00000021680	Setdb2	100	66.383	ENSEASG00005017285	SETDB2	100	66.383	Equus_asinus_asinus
ENSRNOG00000021680	Setdb2	100	66.525	ENSECAG00000020357	SETDB2	100	66.525	Equus_caballus
ENSRNOG00000021680	Setdb2	99	59.494	ENSEEUG00000011247	SETDB2	100	59.494	Erinaceus_europaeus
ENSRNOG00000021680	Setdb2	80	57.447	ENSELUG00000024242	-	88	57.447	Esox_lucius
ENSRNOG00000021680	Setdb2	100	65.816	ENSFCAG00000012034	SETDB2	100	65.816	Felis_catus
ENSRNOG00000021680	Setdb2	99	44.733	ENSFALG00000008379	SETDB2	97	44.733	Ficedula_albicollis
ENSRNOG00000021680	Setdb2	99	64.583	ENSFDAG00000017408	SETDB2	100	64.583	Fukomys_damarensis
ENSRNOG00000021680	Setdb2	99	43.646	ENSGALG00000017006	SETDB2	97	43.646	Gallus_gallus
ENSRNOG00000021680	Setdb2	99	32.432	ENSGAFG00000000077	-	95	32.432	Gambusia_affinis
ENSRNOG00000021680	Setdb2	99	49.067	ENSGAGG00000014099	SETDB2	96	49.067	Gopherus_agassizii
ENSRNOG00000021680	Setdb2	100	68.034	ENSGGOG00000016016	SETDB2	100	68.034	Gorilla_gorilla
ENSRNOG00000021680	Setdb2	81	38.194	ENSHBUG00000001477	-	89	38.194	Haplochromis_burtoni
ENSRNOG00000021680	Setdb2	100	64.498	ENSHGLG00000003820	SETDB2	99	64.498	Heterocephalus_glaber_female
ENSRNOG00000021680	Setdb2	100	64.356	ENSHGLG00100008642	SETDB2	99	64.356	Heterocephalus_glaber_male
ENSRNOG00000021680	Setdb2	75	41.844	ENSHCOG00000007071	-	88	41.844	Hippocampus_comes
ENSRNOG00000021680	Setdb2	68	60.227	ENSIPUG00000011157	setdb2	79	60.227	Ictalurus_punctatus
ENSRNOG00000021680	Setdb2	100	66.902	ENSSTOG00000002985	SETDB2	100	66.902	Ictidomys_tridecemlineatus
ENSRNOG00000021680	Setdb2	99	66.905	ENSJJAG00000011079	Setdb2	99	66.905	Jaculus_jaculus
ENSRNOG00000021680	Setdb2	75	38.571	ENSKMAG00000012100	-	87	52.941	Kryptolebias_marmoratus
ENSRNOG00000021680	Setdb2	99	39.578	ENSLACG00000009640	SETDB2	99	38.281	Latimeria_chalumnae
ENSRNOG00000021680	Setdb2	98	35.635	ENSLOCG00000009739	-	96	36.050	Lepisosteus_oculatus
ENSRNOG00000021680	Setdb2	99	65.126	ENSLAFG00000012612	SETDB2	100	65.126	Loxodonta_africana
ENSRNOG00000021680	Setdb2	100	66.902	ENSMFAG00000032631	SETDB2	100	66.902	Macaca_fascicularis
ENSRNOG00000021680	Setdb2	100	66.902	ENSMMUG00000013473	SETDB2	100	66.902	Macaca_mulatta
ENSRNOG00000021680	Setdb2	100	66.902	ENSMNEG00000037148	SETDB2	100	66.902	Macaca_nemestrina
ENSRNOG00000021680	Setdb2	100	67.044	ENSMLEG00000043613	SETDB2	100	67.044	Mandrillus_leucophaeus
ENSRNOG00000021680	Setdb2	57	56.522	ENSMAMG00000022781	-	80	56.522	Mastacembelus_armatus
ENSRNOG00000021680	Setdb2	81	38.194	ENSMZEG00005012098	-	89	38.194	Maylandia_zebra
ENSRNOG00000021680	Setdb2	99	45.134	ENSMGAG00000015017	SETDB2	99	45.134	Meleagris_gallopavo
ENSRNOG00000021680	Setdb2	100	79.370	ENSMAUG00000012871	Setdb2	100	79.370	Mesocricetus_auratus
ENSRNOG00000021680	Setdb2	100	66.195	ENSMICG00000012641	SETDB2	100	66.195	Microcebus_murinus
ENSRNOG00000021680	Setdb2	100	76.184	ENSMOCG00000021987	Setdb2	100	76.184	Microtus_ochrogaster
ENSRNOG00000021680	Setdb2	100	49.584	ENSMODG00000010929	SETDB2	100	50.000	Monodelphis_domestica
ENSRNOG00000021680	Setdb2	68	54.023	ENSMALG00000001256	-	73	54.023	Monopterus_albus
ENSRNOG00000021680	Setdb2	100	84.648	MGP_CAROLIEiJ_G0019367	Setdb2	100	84.648	Mus_caroli
ENSRNOG00000021680	Setdb2	100	84.075	ENSMUSG00000071350	Setdb2	100	84.075	Mus_musculus
ENSRNOG00000021680	Setdb2	100	85.796	MGP_PahariEiJ_G0030385	Setdb2	100	85.796	Mus_pahari
ENSRNOG00000021680	Setdb2	100	84.218	MGP_SPRETEiJ_G0020259	Setdb2	100	84.218	Mus_spretus
ENSRNOG00000021680	Setdb2	100	66.147	ENSMPUG00000018019	SETDB2	100	66.147	Mustela_putorius_furo
ENSRNOG00000021680	Setdb2	99	64.245	ENSMLUG00000004378	SETDB2	99	64.245	Myotis_lucifugus
ENSRNOG00000021680	Setdb2	100	73.352	ENSNGAG00000013911	Setdb2	100	73.352	Nannospalax_galili
ENSRNOG00000021680	Setdb2	100	67.327	ENSNLEG00000003613	SETDB2	100	67.327	Nomascus_leucogenys
ENSRNOG00000021680	Setdb2	93	44.380	ENSMEUG00000005220	-	100	44.380	Notamacropus_eugenii
ENSRNOG00000021680	Setdb2	83	70.159	ENSOPRG00000012261	SETDB2	83	68.300	Ochotona_princeps
ENSRNOG00000021680	Setdb2	68	47.727	ENSONIG00000009000	-	98	35.664	Oreochromis_niloticus
ENSRNOG00000021680	Setdb2	99	49.160	ENSOANG00000015546	SETDB2	93	49.860	Ornithorhynchus_anatinus
ENSRNOG00000021680	Setdb2	100	64.835	ENSOCUG00000003755	SETDB2	100	64.835	Oryctolagus_cuniculus
ENSRNOG00000021680	Setdb2	69	51.685	ENSORLG00000001147	-	77	51.685	Oryzias_latipes
ENSRNOG00000021680	Setdb2	69	51.685	ENSORLG00020006680	-	81	51.685	Oryzias_latipes_hni
ENSRNOG00000021680	Setdb2	69	51.685	ENSORLG00015009952	-	83	48.182	Oryzias_latipes_hsok
ENSRNOG00000021680	Setdb2	100	65.193	ENSOGAG00000005339	SETDB2	100	65.193	Otolemur_garnettii
ENSRNOG00000021680	Setdb2	100	64.397	ENSOARG00000008487	SETDB2	100	64.397	Ovis_aries
ENSRNOG00000021680	Setdb2	100	68.034	ENSPPAG00000039854	SETDB2	100	68.034	Pan_paniscus
ENSRNOG00000021680	Setdb2	100	66.099	ENSPPRG00000000069	SETDB2	100	66.099	Panthera_pardus
ENSRNOG00000021680	Setdb2	100	66.241	ENSPTIG00000006314	SETDB2	100	66.241	Panthera_tigris_altaica
ENSRNOG00000021680	Setdb2	100	67.893	ENSPTRG00000005873	SETDB2	100	67.893	Pan_troglodytes
ENSRNOG00000021680	Setdb2	100	66.761	ENSPANG00000017051	SETDB2	100	66.761	Papio_anubis
ENSRNOG00000021680	Setdb2	75	59.574	ENSPKIG00000009795	-	85	59.574	Paramormyrops_kingsleyae
ENSRNOG00000021680	Setdb2	99	45.273	ENSPSIG00000002200	SETDB2	95	45.273	Pelodiscus_sinensis
ENSRNOG00000021680	Setdb2	100	51.318	ENSPCIG00000002912	SETDB2	100	51.318	Phascolarctos_cinereus
ENSRNOG00000021680	Setdb2	74	42.029	ENSPFOG00000006673	-	85	42.029	Poecilia_formosa
ENSRNOG00000021680	Setdb2	89	42.754	ENSPLAG00000016914	-	94	42.754	Poecilia_latipinna
ENSRNOG00000021680	Setdb2	89	42.754	ENSPMEG00000003842	-	94	42.754	Poecilia_mexicana
ENSRNOG00000021680	Setdb2	82	52.222	ENSPREG00000022531	-	90	52.222	Poecilia_reticulata
ENSRNOG00000021680	Setdb2	100	67.468	ENSPPYG00000005368	SETDB2	100	67.468	Pongo_abelii
ENSRNOG00000021680	Setdb2	59	89.706	ENSPCAG00000010230	-	58	89.706	Procavia_capensis
ENSRNOG00000021680	Setdb2	100	64.483	ENSPCOG00000017644	SETDB2	99	67.322	Propithecus_coquereli
ENSRNOG00000021680	Setdb2	95	71.429	ENSPVAG00000006911	SETDB2	91	71.429	Pteropus_vampyrus
ENSRNOG00000021680	Setdb2	61	43.307	ENSPNYG00000023676	-	79	40.667	Pundamilia_nyererei
ENSRNOG00000021680	Setdb2	70	55.882	ENSPNAG00000011459	setdb2	82	55.882	Pygocentrus_nattereri
ENSRNOG00000021680	Setdb2	100	67.185	ENSRBIG00000006562	SETDB2	100	67.185	Rhinopithecus_bieti
ENSRNOG00000021680	Setdb2	100	67.044	ENSRROG00000032499	SETDB2	100	67.044	Rhinopithecus_roxellana
ENSRNOG00000021680	Setdb2	100	67.185	ENSSBOG00000023249	SETDB2	100	67.185	Saimiri_boliviensis_boliviensis
ENSRNOG00000021680	Setdb2	100	51.719	ENSSHAG00000007281	SETDB2	100	51.857	Sarcophilus_harrisii
ENSRNOG00000021680	Setdb2	70	61.364	ENSSFOG00015008204	-	76	61.364	Scleropages_formosus
ENSRNOG00000021680	Setdb2	68	53.409	ENSSDUG00000002987	-	87	49.515	Seriola_dumerili
ENSRNOG00000021680	Setdb2	71	51.456	ENSSLDG00000015081	-	86	51.456	Seriola_lalandi_dorsalis
ENSRNOG00000021680	Setdb2	100	61.418	ENSSARG00000009926	SETDB2	100	61.418	Sorex_araneus
ENSRNOG00000021680	Setdb2	70	46.465	ENSSPAG00000006869	-	96	46.465	Stegastes_partitus
ENSRNOG00000021680	Setdb2	100	64.568	ENSSSCG00000009395	SETDB2	100	64.571	Sus_scrofa
ENSRNOG00000021680	Setdb2	96	52.616	ENSTBEG00000008013	SETDB2	100	52.616	Tupaia_belangeri
ENSRNOG00000021680	Setdb2	100	62.553	ENSTTRG00000012932	SETDB2	100	62.553	Tursiops_truncatus
ENSRNOG00000021680	Setdb2	100	66.241	ENSUMAG00000018406	SETDB2	100	66.241	Ursus_maritimus
ENSRNOG00000021680	Setdb2	100	61.408	ENSVPAG00000012019	SETDB2	100	61.408	Vicugna_pacos
ENSRNOG00000021680	Setdb2	89	58.265	ENSVVUG00000028174	SETDB2	92	60.601	Vulpes_vulpes
ENSRNOG00000021680	Setdb2	99	39.861	ENSXETG00000015666	setdb2	100	39.831	Xenopus_tropicalis
ENSRNOG00000021680	Setdb2	78	53.333	ENSXMAG00000006323	-	90	53.333	Xiphophorus_maculatus