EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000021758 (Gene tree)
Gene ID: 296954
Gene Symbol: Tnpo3
Alias: LOC296954
Full Name: transportin 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 77316 bases
Position: chr4:56820023-56897338
Accession: 1308938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074682	Xpo1	PF08389.12	8.8e-29	1	1
ENSRNOP00000040222	Xpo1	PF08389.12	1.2e-28	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000043902	-	4158	-	ENSRNOP00000040222	923 (aa)	-	D4AAM0
ENSRNOT00000090038	-	3342	XM_006236186	ENSRNOP00000074682	857 (aa)	XP_006236248	A0A0G2K8P2

Gene Model

Click here to download ENSRNOG00000021758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000021758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000021758	Tnpo3	100	99.242	ENSG00000064419	TNPO3	100	99.242	Homo_sapiens
ENSRNOG00000021758	Tnpo3	100	86.464	ENSAPOG00000018347	tnpo3	100	86.457	Acanthochromis_polyacanthus
ENSRNOG00000021758	Tnpo3	99	95.798	ENSAMEG00000005135	TNPO3	98	95.798	Ailuropoda_melanoleuca
ENSRNOG00000021758	Tnpo3	100	84.131	ENSACIG00000005897	tnpo3	99	84.032	Amphilophus_citrinellus
ENSRNOG00000021758	Tnpo3	100	86.581	ENSAOCG00000008264	tnpo3	100	86.566	Amphiprion_ocellaris
ENSRNOG00000021758	Tnpo3	100	86.581	ENSAPEG00000024300	tnpo3	100	86.523	Amphiprion_percula
ENSRNOG00000021758	Tnpo3	100	85.648	ENSATEG00000003197	tnpo3	100	85.590	Anabas_testudineus
ENSRNOG00000021758	Tnpo3	73	92.453	ENSAPLG00000005946	TNPO3	91	92.453	Anas_platyrhynchos
ENSRNOG00000021758	Tnpo3	83	92.525	ENSACAG00000013470	TNPO3	95	92.641	Anolis_carolinensis
ENSRNOG00000021758	Tnpo3	100	99.025	ENSANAG00000037940	TNPO3	100	99.025	Aotus_nancymaae
ENSRNOG00000021758	Tnpo3	100	85.881	ENSACLG00000005561	tnpo3	100	85.807	Astatotilapia_calliptera
ENSRNOG00000021758	Tnpo3	100	85.807	ENSAMXG00000016236	tnpo3	100	85.807	Astyanax_mexicanus
ENSRNOG00000021758	Tnpo3	100	98.808	ENSBTAG00000004992	TNPO3	100	98.808	Bos_taurus
ENSRNOG00000021758	Tnpo3	100	99.133	ENSCJAG00000018085	TNPO3	100	99.133	Callithrix_jacchus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSCAFG00000001543	TNPO3	100	99.350	Canis_familiaris
ENSRNOG00000021758	Tnpo3	100	99.350	ENSCAFG00020022462	TNPO3	99	98.919	Canis_lupus_dingo
ENSRNOG00000021758	Tnpo3	100	98.600	ENSCHIG00000011721	TNPO3	100	98.592	Capra_hircus
ENSRNOG00000021758	Tnpo3	100	99.133	ENSTSYG00000002989	TNPO3	100	99.133	Carlito_syrichta
ENSRNOG00000021758	Tnpo3	76	97.849	ENSCAPG00000005843	TNPO3	91	97.849	Cavia_aperea
ENSRNOG00000021758	Tnpo3	100	98.700	ENSCPOG00000039784	TNPO3	100	98.700	Cavia_porcellus
ENSRNOG00000021758	Tnpo3	100	99.133	ENSCCAG00000033826	TNPO3	100	99.133	Cebus_capucinus
ENSRNOG00000021758	Tnpo3	100	99.242	ENSCATG00000030018	TNPO3	100	99.242	Cercocebus_atys
ENSRNOG00000021758	Tnpo3	100	98.274	ENSCLAG00000016298	TNPO3	100	98.274	Chinchilla_lanigera
ENSRNOG00000021758	Tnpo3	100	99.133	ENSCSAG00000009966	TNPO3	100	99.133	Chlorocebus_sabaeus
ENSRNOG00000021758	Tnpo3	96	73.974	ENSCHOG00000011547	TNPO3	99	70.662	Choloepus_hoffmanni
ENSRNOG00000021758	Tnpo3	100	94.399	ENSCPBG00000017497	TNPO3	100	94.399	Chrysemys_picta_bellii
ENSRNOG00000021758	Tnpo3	99	48.911	ENSCING00000005042	-	99	48.911	Ciona_intestinalis
ENSRNOG00000021758	Tnpo3	99	47.110	ENSCSAVG00000008623	-	94	54.182	Ciona_savignyi
ENSRNOG00000021758	Tnpo3	100	99.242	ENSCANG00000033070	TNPO3	100	99.242	Colobus_angolensis_palliatus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSCGRG00001015925	Tnpo3	100	99.350	Cricetulus_griseus_chok1gshd
ENSRNOG00000021758	Tnpo3	100	99.350	ENSCGRG00000010379	Tnpo3	100	99.350	Cricetulus_griseus_crigri
ENSRNOG00000021758	Tnpo3	100	84.832	ENSCSEG00000005952	tnpo3	100	84.832	Cynoglossus_semilaevis
ENSRNOG00000021758	Tnpo3	100	85.414	ENSCVAG00000020285	tnpo3	100	85.374	Cyprinodon_variegatus
ENSRNOG00000021758	Tnpo3	100	85.699	ENSDARG00000045680	tnpo3	100	85.699	Danio_rerio
ENSRNOG00000021758	Tnpo3	100	99.242	ENSDNOG00000002556	TNPO3	100	99.242	Dasypus_novemcinctus
ENSRNOG00000021758	Tnpo3	62	97.064	ENSDORG00000002433	Tnpo3	95	97.064	Dipodomys_ordii
ENSRNOG00000021758	Tnpo3	100	42.578	FBgn0031456	Tnpo-SR	99	42.519	Drosophila_melanogaster
ENSRNOG00000021758	Tnpo3	95	99.341	ENSETEG00000002101	TNPO3	90	99.341	Echinops_telfairi
ENSRNOG00000021758	Tnpo3	100	71.073	ENSEBUG00000016931	tnpo3	100	71.073	Eptatretus_burgeri
ENSRNOG00000021758	Tnpo3	100	99.133	ENSEASG00005008677	TNPO3	100	99.133	Equus_asinus_asinus
ENSRNOG00000021758	Tnpo3	100	99.133	ENSECAG00000012815	TNPO3	100	99.133	Equus_caballus
ENSRNOG00000021758	Tnpo3	99	93.364	ENSEEUG00000005178	TNPO3	98	93.085	Erinaceus_europaeus
ENSRNOG00000021758	Tnpo3	61	32.701	ENSEEUG00000011681	IPO13	73	30.493	Erinaceus_europaeus
ENSRNOG00000021758	Tnpo3	100	86.931	ENSELUG00000012153	tnpo3	99	86.725	Esox_lucius
ENSRNOG00000021758	Tnpo3	100	99.350	ENSFCAG00000018186	TNPO3	100	99.350	Felis_catus
ENSRNOG00000021758	Tnpo3	100	89.323	ENSFALG00000010667	TNPO3	100	89.521	Ficedula_albicollis
ENSRNOG00000021758	Tnpo3	100	98.595	ENSFDAG00000019578	TNPO3	100	98.595	Fukomys_damarensis
ENSRNOG00000021758	Tnpo3	100	85.531	ENSFHEG00000012859	tnpo3	100	85.482	Fundulus_heteroclitus
ENSRNOG00000021758	Tnpo3	100	85.265	ENSGMOG00000007324	tnpo3	100	85.265	Gadus_morhua
ENSRNOG00000021758	Tnpo3	61	94.128	ENSGALG00000039420	TNPO3	98	94.128	Gallus_gallus
ENSRNOG00000021758	Tnpo3	100	85.699	ENSGACG00000000699	tnpo3	100	85.699	Gasterosteus_aculeatus
ENSRNOG00000021758	Tnpo3	100	94.282	ENSGAGG00000006777	TNPO3	100	94.282	Gopherus_agassizii
ENSRNOG00000021758	Tnpo3	100	99.242	ENSGGOG00000008339	TNPO3	100	99.242	Gorilla_gorilla
ENSRNOG00000021758	Tnpo3	100	85.881	ENSHBUG00000008351	tnpo3	100	85.807	Haplochromis_burtoni
ENSRNOG00000021758	Tnpo3	100	99.133	ENSHGLG00000004463	TNPO3	100	99.133	Heterocephalus_glaber_female
ENSRNOG00000021758	Tnpo3	100	99.133	ENSHGLG00100005509	TNPO3	100	99.133	Heterocephalus_glaber_male
ENSRNOG00000021758	Tnpo3	100	84.947	ENSHCOG00000007221	tnpo3	100	84.832	Hippocampus_comes
ENSRNOG00000021758	Tnpo3	100	84.947	ENSIPUG00000014979	TNPO3	99	84.940	Ictalurus_punctatus
ENSRNOG00000021758	Tnpo3	100	99.242	ENSSTOG00000004885	TNPO3	100	99.242	Ictidomys_tridecemlineatus
ENSRNOG00000021758	Tnpo3	99	94.070	ENSJJAG00000013530	Tnpo3	100	91.802	Jaculus_jaculus
ENSRNOG00000021758	Tnpo3	100	85.915	ENSKMAG00000010497	tnpo3	100	85.915	Kryptolebias_marmoratus
ENSRNOG00000021758	Tnpo3	97	86.675	ENSLBEG00000016595	tnpo3	100	84.371	Labrus_bergylta
ENSRNOG00000021758	Tnpo3	100	81.680	ENSLBEG00000011988	-	99	81.767	Labrus_bergylta
ENSRNOG00000021758	Tnpo3	84	90.270	ENSLACG00000002351	TNPO3	99	90.270	Latimeria_chalumnae
ENSRNOG00000021758	Tnpo3	100	87.324	ENSLOCG00000015556	tnpo3	100	87.324	Lepisosteus_oculatus
ENSRNOG00000021758	Tnpo3	100	98.598	ENSLAFG00000002738	TNPO3	100	98.598	Loxodonta_africana
ENSRNOG00000021758	Tnpo3	100	99.242	ENSMFAG00000032385	TNPO3	100	99.242	Macaca_fascicularis
ENSRNOG00000021758	Tnpo3	100	99.242	ENSMMUG00000004311	TNPO3	100	99.242	Macaca_mulatta
ENSRNOG00000021758	Tnpo3	100	99.242	ENSMNEG00000045277	TNPO3	100	99.242	Macaca_nemestrina
ENSRNOG00000021758	Tnpo3	100	99.242	ENSMLEG00000037881	TNPO3	100	99.242	Mandrillus_leucophaeus
ENSRNOG00000021758	Tnpo3	100	86.231	ENSMAMG00000021096	tnpo3	100	86.132	Mastacembelus_armatus
ENSRNOG00000021758	Tnpo3	100	85.881	ENSMZEG00005015084	tnpo3	100	85.807	Maylandia_zebra
ENSRNOG00000021758	Tnpo3	81	89.065	ENSMGAG00000002839	TNPO3	99	89.103	Meleagris_gallopavo
ENSRNOG00000021758	Tnpo3	100	99.242	ENSMAUG00000013463	Tnpo3	100	99.242	Mesocricetus_auratus
ENSRNOG00000021758	Tnpo3	68	35.659	ENSMICG00000011003	IPO13	77	33.136	Microcebus_murinus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSMICG00000000140	TNPO3	100	99.350	Microcebus_murinus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSMOCG00000013264	Tnpo3	100	99.350	Microtus_ochrogaster
ENSRNOG00000021758	Tnpo3	100	85.298	ENSMMOG00000005887	tnpo3	100	85.265	Mola_mola
ENSRNOG00000021758	Tnpo3	100	97.550	ENSMODG00000014700	TNPO3	100	97.508	Monodelphis_domestica
ENSRNOG00000021758	Tnpo3	100	85.590	ENSMALG00000006675	tnpo3	100	85.590	Monopterus_albus
ENSRNOG00000021758	Tnpo3	100	99.783	MGP_CAROLIEiJ_G0028176	Tnpo3	100	99.783	Mus_caroli
ENSRNOG00000021758	Tnpo3	100	99.783	ENSMUSG00000012535	Tnpo3	100	99.783	Mus_musculus
ENSRNOG00000021758	Tnpo3	100	99.675	MGP_PahariEiJ_G0021934	Tnpo3	100	99.675	Mus_pahari
ENSRNOG00000021758	Tnpo3	100	99.675	MGP_SPRETEiJ_G0029176	Tnpo3	100	99.675	Mus_spretus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSMPUG00000006021	TNPO3	100	99.350	Mustela_putorius_furo
ENSRNOG00000021758	Tnpo3	100	88.841	ENSMLUG00000000947	TNPO3	100	88.841	Myotis_lucifugus
ENSRNOG00000021758	Tnpo3	100	99.458	ENSNGAG00000008722	Tnpo3	100	99.458	Nannospalax_galili
ENSRNOG00000021758	Tnpo3	100	84.182	ENSNBRG00000019001	tnpo3	100	85.457	Neolamprologus_brichardi
ENSRNOG00000021758	Tnpo3	100	95.507	ENSNLEG00000012491	TNPO3	100	95.507	Nomascus_leucogenys
ENSRNOG00000021758	Tnpo3	89	95.172	ENSMEUG00000002445	TNPO3	83	95.172	Notamacropus_eugenii
ENSRNOG00000021758	Tnpo3	91	99.457	ENSOPRG00000006163	TNPO3	90	99.457	Ochotona_princeps
ENSRNOG00000021758	Tnpo3	98	98.780	ENSODEG00000012826	TNPO3	100	98.780	Octodon_degus
ENSRNOG00000021758	Tnpo3	100	86.114	ENSONIG00000007604	tnpo3	100	86.024	Oreochromis_niloticus
ENSRNOG00000021758	Tnpo3	99	92.626	ENSOANG00000011451	TNPO3	100	92.834	Ornithorhynchus_anatinus
ENSRNOG00000021758	Tnpo3	99	95.378	ENSOCUG00000010105	TNPO3	99	95.378	Oryctolagus_cuniculus
ENSRNOG00000021758	Tnpo3	100	84.832	ENSORLG00000029369	tnpo3	100	84.832	Oryzias_latipes
ENSRNOG00000021758	Tnpo3	100	84.832	ENSORLG00020003464	tnpo3	100	84.832	Oryzias_latipes_hni
ENSRNOG00000021758	Tnpo3	100	84.940	ENSORLG00015002610	tnpo3	100	84.940	Oryzias_latipes_hsok
ENSRNOG00000021758	Tnpo3	100	85.049	ENSOMEG00000021006	tnpo3	100	85.049	Oryzias_melastigma
ENSRNOG00000021758	Tnpo3	100	99.133	ENSOGAG00000015340	TNPO3	100	99.133	Otolemur_garnettii
ENSRNOG00000021758	Tnpo3	100	98.375	ENSOARG00000004026	TNPO3	100	98.375	Ovis_aries
ENSRNOG00000021758	Tnpo3	100	99.242	ENSPPAG00000034975	TNPO3	100	99.242	Pan_paniscus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSPPRG00000002050	TNPO3	100	99.350	Panthera_pardus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSPTIG00000016167	TNPO3	100	99.350	Panthera_tigris_altaica
ENSRNOG00000021758	Tnpo3	100	99.242	ENSPTRG00000019676	TNPO3	100	99.242	Pan_troglodytes
ENSRNOG00000021758	Tnpo3	98	99.116	ENSPANG00000022226	TNPO3	99	99.116	Papio_anubis
ENSRNOG00000021758	Tnpo3	100	80.670	ENSPKIG00000008628	-	100	80.670	Paramormyrops_kingsleyae
ENSRNOG00000021758	Tnpo3	100	83.547	ENSPKIG00000023234	tnpo3	100	83.532	Paramormyrops_kingsleyae
ENSRNOG00000021758	Tnpo3	62	79.577	ENSPMGG00000009763	tnpo3	99	79.577	Periophthalmus_magnuspinnatus
ENSRNOG00000021758	Tnpo3	100	99.242	ENSPEMG00000000422	Tnpo3	100	99.242	Peromyscus_maniculatus_bairdii
ENSRNOG00000021758	Tnpo3	100	72.177	ENSPMAG00000008621	tnpo3	100	72.707	Petromyzon_marinus
ENSRNOG00000021758	Tnpo3	100	96.966	ENSPCIG00000011366	TNPO3	100	96.966	Phascolarctos_cinereus
ENSRNOG00000021758	Tnpo3	100	85.157	ENSPFOG00000013592	tnpo3	99	85.157	Poecilia_formosa
ENSRNOG00000021758	Tnpo3	100	85.157	ENSPLAG00000010188	tnpo3	100	85.157	Poecilia_latipinna
ENSRNOG00000021758	Tnpo3	100	85.265	ENSPMEG00000022731	tnpo3	100	85.265	Poecilia_mexicana
ENSRNOG00000021758	Tnpo3	100	99.242	ENSPPYG00000017990	TNPO3	100	99.242	Pongo_abelii
ENSRNOG00000021758	Tnpo3	99	88.038	ENSPCAG00000010158	TNPO3	98	88.038	Procavia_capensis
ENSRNOG00000021758	Tnpo3	88	99.013	ENSPCOG00000023901	TNPO3	97	99.013	Propithecus_coquereli
ENSRNOG00000021758	Tnpo3	99	92.227	ENSPVAG00000015757	TNPO3	98	92.227	Pteropus_vampyrus
ENSRNOG00000021758	Tnpo3	100	85.881	ENSPNYG00000002349	tnpo3	100	85.807	Pundamilia_nyererei
ENSRNOG00000021758	Tnpo3	100	86.814	ENSPNAG00000001142	tnpo3	100	86.782	Pygocentrus_nattereri
ENSRNOG00000021758	Tnpo3	100	99.133	ENSRBIG00000042549	TNPO3	100	99.133	Rhinopithecus_bieti
ENSRNOG00000021758	Tnpo3	100	99.133	ENSRROG00000039264	TNPO3	100	99.133	Rhinopithecus_roxellana
ENSRNOG00000021758	Tnpo3	100	79.937	ENSSBOG00000029642	TNPO3	100	79.937	Saimiri_boliviensis_boliviensis
ENSRNOG00000021758	Tnpo3	100	97.666	ENSSHAG00000006837	TNPO3	100	97.735	Sarcophilus_harrisii
ENSRNOG00000021758	Tnpo3	100	84.714	ENSSFOG00015001474	tnpo3	100	84.615	Scleropages_formosus
ENSRNOG00000021758	Tnpo3	100	80.876	ENSSFOG00015004256	tnpo3	100	80.876	Scleropages_formosus
ENSRNOG00000021758	Tnpo3	100	86.132	ENSSMAG00000010422	tnpo3	97	86.132	Scophthalmus_maximus
ENSRNOG00000021758	Tnpo3	100	86.581	ENSSDUG00000004850	tnpo3	100	86.566	Seriola_dumerili
ENSRNOG00000021758	Tnpo3	100	86.581	ENSSLDG00000016927	tnpo3	100	86.566	Seriola_lalandi_dorsalis
ENSRNOG00000021758	Tnpo3	99	85.391	ENSSARG00000013893	TNPO3	98	85.809	Sorex_araneus
ENSRNOG00000021758	Tnpo3	100	86.891	ENSSPUG00000007457	TNPO3	99	87.365	Sphenodon_punctatus
ENSRNOG00000021758	Tnpo3	79	87.466	ENSSPAG00000014209	tnpo3	99	87.466	Stegastes_partitus
ENSRNOG00000021758	Tnpo3	100	99.300	ENSSSCG00000016572	TNPO3	100	99.300	Sus_scrofa
ENSRNOG00000021758	Tnpo3	100	83.909	ENSTNIG00000003347	tnpo3	100	83.909	Tetraodon_nigroviridis
ENSRNOG00000021758	Tnpo3	88	99.029	ENSTBEG00000007220	TNPO3	90	99.029	Tupaia_belangeri
ENSRNOG00000021758	Tnpo3	99	84.349	ENSTTRG00000014618	TNPO3	98	84.349	Tursiops_truncatus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSUAMG00000021281	TNPO3	100	99.350	Ursus_americanus
ENSRNOG00000021758	Tnpo3	100	99.350	ENSUMAG00000006882	TNPO3	100	99.350	Ursus_maritimus
ENSRNOG00000021758	Tnpo3	88	83.746	ENSVPAG00000006166	TNPO3	88	83.746	Vicugna_pacos
ENSRNOG00000021758	Tnpo3	100	99.350	ENSVVUG00000011004	TNPO3	100	99.188	Vulpes_vulpes
ENSRNOG00000021758	Tnpo3	100	82.505	ENSXETG00000015009	tnpo3	100	82.505	Xenopus_tropicalis
ENSRNOG00000021758	Tnpo3	100	84.940	ENSXMAG00000013062	tnpo3	100	84.940	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	-	ISO	Process
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component