EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022039 (Gene tree)
Gene ID: 362635
Gene Symbol: Zbtb40
Alias: LOC362635|RGD1309866
Full Name: zinc finger and BTB domain containing 40
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 34768 bases
Position: chr5:155346965-155381732
Accession: 1309866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000035665	zf-C2H2	PF00096.26	3e-33	1	4
ENSRNOP00000035665	zf-C2H2	PF00096.26	3e-33	2	4
ENSRNOP00000035665	zf-C2H2	PF00096.26	3e-33	3	4
ENSRNOP00000035665	zf-C2H2	PF00096.26	3e-33	4	4
ENSRNOP00000035665	zf-met	PF12874.7	0.00016	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000033670	-	4013	XM_006239232	ENSRNOP00000035665	1254 (aa)	XP_006239294	D4A365

Gene Model

Click here to download ENSRNOG00000022039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000022039	Zbtb40	51	33.696	ENSRNOG00000000308	Zbtb24	69	32.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022039	Zbtb40	100	77.948	ENSG00000184677	ZBTB40	100	77.948	Homo_sapiens
ENSRNOG00000022039	Zbtb40	100	76.947	ENSAMEG00000014635	ZBTB40	100	76.711	Ailuropoda_melanoleuca
ENSRNOG00000022039	Zbtb40	100	93.238	ENSANAG00000010550	ZBTB40	100	77.644	Aotus_nancymaae
ENSRNOG00000022039	Zbtb40	100	74.369	ENSBTAG00000016448	ZBTB40	100	74.211	Bos_taurus
ENSRNOG00000022039	Zbtb40	100	77.644	ENSCJAG00000005869	ZBTB40	100	77.535	Callithrix_jacchus
ENSRNOG00000022039	Zbtb40	100	75.984	ENSCAFG00000014644	ZBTB40	100	75.827	Canis_familiaris
ENSRNOG00000022039	Zbtb40	100	76.554	ENSCAFG00020019562	ZBTB40	100	76.336	Canis_lupus_dingo
ENSRNOG00000022039	Zbtb40	100	73.606	ENSCHIG00000007943	ZBTB40	100	73.449	Capra_hircus
ENSRNOG00000022039	Zbtb40	100	76.772	ENSTSYG00000000979	ZBTB40	100	76.663	Carlito_syrichta
ENSRNOG00000022039	Zbtb40	100	75.272	ENSCAPG00000009177	ZBTB40	100	75.272	Cavia_aperea
ENSRNOG00000022039	Zbtb40	100	75.571	ENSCPOG00000012844	ZBTB40	100	75.571	Cavia_porcellus
ENSRNOG00000022039	Zbtb40	100	77.099	ENSCCAG00000021093	ZBTB40	100	76.990	Cebus_capucinus
ENSRNOG00000022039	Zbtb40	100	78.166	ENSCATG00000031739	ZBTB40	100	78.166	Cercocebus_atys
ENSRNOG00000022039	Zbtb40	100	79.365	ENSCLAG00000015032	ZBTB40	100	79.365	Chinchilla_lanigera
ENSRNOG00000022039	Zbtb40	100	77.445	ENSCSAG00000000911	ZBTB40	100	77.445	Chlorocebus_sabaeus
ENSRNOG00000022039	Zbtb40	100	95.019	ENSCHOG00000011197	ZBTB40	93	95.019	Choloepus_hoffmanni
ENSRNOG00000022039	Zbtb40	100	77.838	ENSCANG00000038636	ZBTB40	100	77.838	Colobus_angolensis_palliatus
ENSRNOG00000022039	Zbtb40	100	84.726	ENSCGRG00001016016	Zbtb40	100	84.726	Cricetulus_griseus_chok1gshd
ENSRNOG00000022039	Zbtb40	100	84.579	ENSCGRG00000008459	Zbtb40	100	84.579	Cricetulus_griseus_crigri
ENSRNOG00000022039	Zbtb40	100	35.810	ENSDARG00000091762	zbtb40	100	35.912	Danio_rerio
ENSRNOG00000022039	Zbtb40	100	76.911	ENSDNOG00000006200	ZBTB40	100	76.832	Dasypus_novemcinctus
ENSRNOG00000022039	Zbtb40	100	77.426	ENSDORG00000016495	Zbtb40	100	77.015	Dipodomys_ordii
ENSRNOG00000022039	Zbtb40	100	76.078	ENSEASG00005007270	ZBTB40	100	75.843	Equus_asinus_asinus
ENSRNOG00000022039	Zbtb40	99	76.322	ENSECAG00000016319	ZBTB40	99	75.207	Equus_caballus
ENSRNOG00000022039	Zbtb40	83	71.469	ENSEEUG00000001708	ZBTB40	100	71.239	Erinaceus_europaeus
ENSRNOG00000022039	Zbtb40	100	77.863	ENSFCAG00000028182	ZBTB40	100	77.644	Felis_catus
ENSRNOG00000022039	Zbtb40	95	84.118	ENSFDAG00000003410	ZBTB40	100	83.984	Fukomys_damarensis
ENSRNOG00000022039	Zbtb40	100	77.729	ENSGGOG00000010010	ZBTB40	100	77.729	Gorilla_gorilla
ENSRNOG00000022039	Zbtb40	100	93.137	ENSHGLG00000016950	ZBTB40	95	62.558	Heterocephalus_glaber_female
ENSRNOG00000022039	Zbtb40	100	93.137	ENSHGLG00100008314	ZBTB40	95	62.558	Heterocephalus_glaber_male
ENSRNOG00000022039	Zbtb40	100	77.287	ENSSTOG00000009598	ZBTB40	100	77.287	Ictidomys_tridecemlineatus
ENSRNOG00000022039	Zbtb40	100	79.634	ENSJJAG00000018013	Zbtb40	100	79.714	Jaculus_jaculus
ENSRNOG00000022039	Zbtb40	100	78.952	ENSLAFG00000006483	ZBTB40	100	78.793	Loxodonta_africana
ENSRNOG00000022039	Zbtb40	100	77.729	ENSMFAG00000043032	ZBTB40	100	77.729	Macaca_fascicularis
ENSRNOG00000022039	Zbtb40	100	77.729	ENSMMUG00000018618	ZBTB40	100	77.729	Macaca_mulatta
ENSRNOG00000022039	Zbtb40	100	77.729	ENSMNEG00000032628	ZBTB40	100	77.729	Macaca_nemestrina
ENSRNOG00000022039	Zbtb40	100	77.838	ENSMLEG00000027910	ZBTB40	100	77.838	Mandrillus_leucophaeus
ENSRNOG00000022039	Zbtb40	100	85.215	ENSMAUG00000010466	Zbtb40	100	85.215	Mesocricetus_auratus
ENSRNOG00000022039	Zbtb40	100	81.044	ENSMICG00000007464	ZBTB40	100	80.817	Microcebus_murinus
ENSRNOG00000022039	Zbtb40	100	86.497	ENSMOCG00000013259	Zbtb40	100	86.497	Microtus_ochrogaster
ENSRNOG00000022039	Zbtb40	100	90.692	MGP_CAROLIEiJ_G0026672	Zbtb40	100	90.692	Mus_caroli
ENSRNOG00000022039	Zbtb40	100	90.223	ENSMUSG00000060862	Zbtb40	99	97.388	Mus_musculus
ENSRNOG00000022039	Zbtb40	100	91.169	MGP_PahariEiJ_G0029005	Zbtb40	100	91.169	Mus_pahari
ENSRNOG00000022039	Zbtb40	100	90.453	MGP_SPRETEiJ_G0027652	Zbtb40	100	90.453	Mus_spretus
ENSRNOG00000022039	Zbtb40	100	75.887	ENSMPUG00000015961	ZBTB40	100	75.729	Mustela_putorius_furo
ENSRNOG00000022039	Zbtb40	100	80.812	ENSNGAG00000019354	Zbtb40	100	80.812	Nannospalax_galili
ENSRNOG00000022039	Zbtb40	100	77.402	ENSNLEG00000008268	ZBTB40	100	77.402	Nomascus_leucogenys
ENSRNOG00000022039	Zbtb40	96	76.515	ENSOPRG00000003103	ZBTB40	95	76.190	Ochotona_princeps
ENSRNOG00000022039	Zbtb40	100	78.583	ENSOGAG00000004797	ZBTB40	100	78.504	Otolemur_garnettii
ENSRNOG00000022039	Zbtb40	100	73.920	ENSOARG00000008054	ZBTB40	100	73.763	Ovis_aries
ENSRNOG00000022039	Zbtb40	100	77.729	ENSPPAG00000034112	ZBTB40	100	77.729	Pan_paniscus
ENSRNOG00000022039	Zbtb40	100	77.754	ENSPPRG00000021468	ZBTB40	100	77.535	Panthera_pardus
ENSRNOG00000022039	Zbtb40	100	77.535	ENSPTIG00000010874	ZBTB40	100	77.317	Panthera_tigris_altaica
ENSRNOG00000022039	Zbtb40	100	77.620	ENSPTRG00000000315	ZBTB40	100	77.620	Pan_troglodytes
ENSRNOG00000022039	Zbtb40	100	80.272	ENSPANG00000018749	ZBTB40	100	80.272	Papio_anubis
ENSRNOG00000022039	Zbtb40	100	85.703	ENSPEMG00000009389	Zbtb40	100	85.703	Peromyscus_maniculatus_bairdii
ENSRNOG00000022039	Zbtb40	100	64.493	ENSPCIG00000026425	ZBTB40	100	64.623	Phascolarctos_cinereus
ENSRNOG00000022039	Zbtb40	100	77.366	ENSPPYG00000001752	ZBTB40	100	77.366	Pongo_abelii
ENSRNOG00000022039	Zbtb40	100	95.714	ENSPCOG00000006905	ZBTB40	100	95.714	Propithecus_coquereli
ENSRNOG00000022039	Zbtb40	100	77.729	ENSRBIG00000034608	ZBTB40	100	77.729	Rhinopithecus_bieti
ENSRNOG00000022039	Zbtb40	100	77.729	ENSRROG00000034514	ZBTB40	100	77.729	Rhinopithecus_roxellana
ENSRNOG00000022039	Zbtb40	100	77.099	ENSSBOG00000027235	ZBTB40	100	76.990	Saimiri_boliviensis_boliviensis
ENSRNOG00000022039	Zbtb40	100	76.966	ENSUAMG00000020372	ZBTB40	100	76.728	Ursus_americanus
ENSRNOG00000022039	Zbtb40	100	77.125	ENSUMAG00000013539	ZBTB40	100	76.886	Ursus_maritimus
ENSRNOG00000022039	Zbtb40	100	76.772	ENSVVUG00000025752	ZBTB40	100	76.554	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISS	Process