EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022354 (Gene tree)
Gene ID: 362681
Gene Symbol: Pusl1
Alias: LOC362681
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 3993 bases
Position: chr5:173336034-173340026
Accession: 1559560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074040	PseudoU_synth_1	PF01416.20	7.6e-34	1	2
ENSRNOP00000074040	PseudoU_synth_1	PF01416.20	7.6e-34	2	2
ENSRNOP00000059679	PseudoU_synth_1	PF01416.20	7.4e-25	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000067704	-	1688	-	ENSRNOP00000059679	127 (aa)	-	D3ZTC6
ENSRNOT00000078453	-	1243	-	ENSRNOP00000074040	291 (aa)	XP_017449016	A0A0G2K730

Gene Model

Click here to download ENSRNOG00000022354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022354	Pusl1	98	86.290	ENSG00000169972	PUSL1	100	85.600	Homo_sapiens
ENSRNOG00000022354	Pusl1	98	47.619	ENSAPOG00000016290	pusl1	92	49.275	Acanthochromis_polyacanthus
ENSRNOG00000022354	Pusl1	98	83.065	ENSAMEG00000013752	PUSL1	94	79.371	Ailuropoda_melanoleuca
ENSRNOG00000022354	Pusl1	100	48.062	ENSACIG00000015240	pusl1	99	47.794	Amphilophus_citrinellus
ENSRNOG00000022354	Pusl1	99	47.766	ENSAOCG00000019419	pusl1	87	47.766	Amphiprion_ocellaris
ENSRNOG00000022354	Pusl1	98	48.084	ENSAPEG00000005452	pusl1	95	48.084	Amphiprion_percula
ENSRNOG00000022354	Pusl1	94	49.458	ENSATEG00000024154	pusl1	92	49.458	Anabas_testudineus
ENSRNOG00000022354	Pusl1	94	53.261	ENSAPLG00000004946	PUSL1	92	53.261	Anas_platyrhynchos
ENSRNOG00000022354	Pusl1	97	50.000	ENSACAG00000014111	PUSL1	98	54.231	Anolis_carolinensis
ENSRNOG00000022354	Pusl1	97	84.553	ENSANAG00000037456	PUSL1	96	81.443	Aotus_nancymaae
ENSRNOG00000022354	Pusl1	98	47.619	ENSACLG00000008675	pusl1	92	49.097	Astatotilapia_calliptera
ENSRNOG00000022354	Pusl1	95	49.091	ENSAMXG00000044007	pusl1	93	49.091	Astyanax_mexicanus
ENSRNOG00000022354	Pusl1	98	82.258	ENSBTAG00000007619	PUSL1	97	81.851	Bos_taurus
ENSRNOG00000022354	Pusl1	97	84.553	ENSCJAG00000010972	PUSL1	96	81.443	Callithrix_jacchus
ENSRNOG00000022354	Pusl1	98	81.452	ENSCAFG00000019291	PUSL1	93	77.739	Canis_familiaris
ENSRNOG00000022354	Pusl1	98	81.452	ENSCAFG00020011568	PUSL1	92	79.859	Canis_lupus_dingo
ENSRNOG00000022354	Pusl1	98	84.677	ENSCHIG00000012615	PUSL1	98	82.918	Capra_hircus
ENSRNOG00000022354	Pusl1	98	84.677	ENSCAPG00000011911	-	92	84.677	Cavia_aperea
ENSRNOG00000022354	Pusl1	90	31.304	ENSCPOG00000001027	PUS1	51	30.612	Cavia_porcellus
ENSRNOG00000022354	Pusl1	98	84.677	ENSCPOG00000005149	PUSL1	92	79.152	Cavia_porcellus
ENSRNOG00000022354	Pusl1	97	86.179	ENSCCAG00000027475	PUSL1	96	82.474	Cebus_capucinus
ENSRNOG00000022354	Pusl1	98	84.677	ENSCATG00000018260	PUSL1	96	81.443	Cercocebus_atys
ENSRNOG00000022354	Pusl1	65	30.208	ENSCLAG00000011689	PUS1	50	30.102	Chinchilla_lanigera
ENSRNOG00000022354	Pusl1	98	82.258	ENSCLAG00000005232	PUSL1	93	80.565	Chinchilla_lanigera
ENSRNOG00000022354	Pusl1	98	85.484	ENSCSAG00000000680	PUSL1	96	81.787	Chlorocebus_sabaeus
ENSRNOG00000022354	Pusl1	96	54.839	ENSCPBG00000022621	PUSL1	96	52.837	Chrysemys_picta_bellii
ENSRNOG00000022354	Pusl1	98	85.484	ENSCANG00000034373	PUSL1	96	81.443	Colobus_angolensis_palliatus
ENSRNOG00000022354	Pusl1	100	87.973	ENSCGRG00001012429	Pusl1	100	87.973	Cricetulus_griseus_chok1gshd
ENSRNOG00000022354	Pusl1	100	87.973	ENSCGRG00000006466	Pusl1	100	87.973	Cricetulus_griseus_crigri
ENSRNOG00000022354	Pusl1	99	48.438	ENSCSEG00000005159	pusl1	92	50.725	Cynoglossus_semilaevis
ENSRNOG00000022354	Pusl1	86	44.980	ENSCVAG00000012923	pusl1	95	44.980	Cyprinodon_variegatus
ENSRNOG00000022354	Pusl1	100	48.062	ENSDARG00000074565	pusl1	97	48.746	Danio_rerio
ENSRNOG00000022354	Pusl1	93	32.781	FBgn0083976	CG34140	98	32.781	Drosophila_melanogaster
ENSRNOG00000022354	Pusl1	98	81.452	ENSECAG00000006248	PUSL1	95	79.861	Equus_caballus
ENSRNOG00000022354	Pusl1	98	75.806	ENSEEUG00000000837	PUSL1	97	75.433	Erinaceus_europaeus
ENSRNOG00000022354	Pusl1	95	50.407	ENSELUG00000015945	pusl1	95	49.821	Esox_lucius
ENSRNOG00000022354	Pusl1	98	81.452	ENSFCAG00000007617	PUSL1	95	79.720	Felis_catus
ENSRNOG00000022354	Pusl1	98	82.258	ENSFDAG00000010007	-	95	82.258	Fukomys_damarensis
ENSRNOG00000022354	Pusl1	94	54.918	ENSFHEG00000006370	pusl1	92	53.261	Fundulus_heteroclitus
ENSRNOG00000022354	Pusl1	94	50.714	ENSGMOG00000019388	pusl1	98	50.714	Gadus_morhua
ENSRNOG00000022354	Pusl1	96	51.786	ENSGALG00000001714	PUSL1	96	51.786	Gallus_gallus
ENSRNOG00000022354	Pusl1	98	52.381	ENSGAFG00000007546	pusl1	95	52.143	Gambusia_affinis
ENSRNOG00000022354	Pusl1	94	48.188	ENSGACG00000007848	pusl1	91	48.188	Gasterosteus_aculeatus
ENSRNOG00000022354	Pusl1	96	54.032	ENSGAGG00000004730	PUSL1	96	53.191	Gopherus_agassizii
ENSRNOG00000022354	Pusl1	98	86.290	ENSGGOG00000005364	PUSL1	95	82.114	Gorilla_gorilla
ENSRNOG00000022354	Pusl1	94	48.913	ENSHBUG00000001264	pusl1	91	48.913	Haplochromis_burtoni
ENSRNOG00000022354	Pusl1	98	79.200	ENSHGLG00000017570	PUSL1	94	77.509	Heterocephalus_glaber_female
ENSRNOG00000022354	Pusl1	98	79.200	ENSHGLG00100007641	PUSL1	87	78.788	Heterocephalus_glaber_male
ENSRNOG00000022354	Pusl1	98	50.794	ENSHCOG00000010077	pusl1	99	51.460	Hippocampus_comes
ENSRNOG00000022354	Pusl1	96	48.399	ENSIPUG00000023921	pusl1	96	48.399	Ictalurus_punctatus
ENSRNOG00000022354	Pusl1	97	85.366	ENSSTOG00000001783	PUSL1	90	82.230	Ictidomys_tridecemlineatus
ENSRNOG00000022354	Pusl1	100	83.162	ENSJJAG00000020471	Pusl1	99	83.562	Jaculus_jaculus
ENSRNOG00000022354	Pusl1	94	45.082	ENSKMAG00000005154	pusl1	84	48.790	Kryptolebias_marmoratus
ENSRNOG00000022354	Pusl1	94	50.545	ENSLBEG00000013469	pusl1	94	50.545	Labrus_bergylta
ENSRNOG00000022354	Pusl1	66	53.608	ENSLACG00000018795	PUSL1	95	53.608	Latimeria_chalumnae
ENSRNOG00000022354	Pusl1	96	49.286	ENSLOCG00000002210	pusl1	95	49.286	Lepisosteus_oculatus
ENSRNOG00000022354	Pusl1	98	79.839	ENSLAFG00000013685	PUSL1	99	79.848	Loxodonta_africana
ENSRNOG00000022354	Pusl1	98	86.290	ENSMFAG00000046288	PUSL1	96	81.787	Macaca_fascicularis
ENSRNOG00000022354	Pusl1	98	87.097	ENSMMUG00000016279	PUSL1	96	72.852	Macaca_mulatta
ENSRNOG00000022354	Pusl1	98	84.677	ENSMNEG00000037989	PUSL1	96	81.787	Macaca_nemestrina
ENSRNOG00000022354	Pusl1	100	81.890	ENSMLEG00000039224	-	97	81.890	Mandrillus_leucophaeus
ENSRNOG00000022354	Pusl1	93	49.458	ENSMAMG00000016538	pusl1	90	49.458	Mastacembelus_armatus
ENSRNOG00000022354	Pusl1	98	47.619	ENSMZEG00005026990	pusl1	96	45.357	Maylandia_zebra
ENSRNOG00000022354	Pusl1	99	50.000	ENSMGAG00000003037	PUSL1	96	52.128	Meleagris_gallopavo
ENSRNOG00000022354	Pusl1	100	88.316	ENSMAUG00000019924	Pusl1	100	88.316	Mesocricetus_auratus
ENSRNOG00000022354	Pusl1	98	82.258	ENSMICG00000014171	PUSL1	98	79.861	Microcebus_murinus
ENSRNOG00000022354	Pusl1	100	89.003	ENSMOCG00000005602	Pusl1	100	89.003	Microtus_ochrogaster
ENSRNOG00000022354	Pusl1	98	46.825	ENSMMOG00000003269	pusl1	99	48.561	Mola_mola
ENSRNOG00000022354	Pusl1	93	49.275	ENSMALG00000021686	pusl1	90	49.275	Monopterus_albus
ENSRNOG00000022354	Pusl1	100	93.814	MGP_CAROLIEiJ_G0026911	Pusl1	100	93.814	Mus_caroli
ENSRNOG00000022354	Pusl1	100	93.471	ENSMUSG00000051557	Pusl1	100	93.471	Mus_musculus
ENSRNOG00000022354	Pusl1	100	94.502	MGP_PahariEiJ_G0029260	Pusl1	100	94.502	Mus_pahari
ENSRNOG00000022354	Pusl1	100	93.471	MGP_SPRETEiJ_G0027906	Pusl1	100	93.471	Mus_spretus
ENSRNOG00000022354	Pusl1	98	80.645	ENSMPUG00000014313	PUSL1	95	76.976	Mustela_putorius_furo
ENSRNOG00000022354	Pusl1	99	83.391	ENSNGAG00000004647	Pusl1	87	83.391	Nannospalax_galili
ENSRNOG00000022354	Pusl1	98	48.413	ENSNBRG00000014762	pusl1	91	48.207	Neolamprologus_brichardi
ENSRNOG00000022354	Pusl1	98	84.677	ENSNLEG00000000051	PUSL1	96	81.887	Nomascus_leucogenys
ENSRNOG00000022354	Pusl1	95	54.918	ENSMEUG00000005176	-	98	52.015	Notamacropus_eugenii
ENSRNOG00000022354	Pusl1	97	65.371	ENSMEUG00000011649	-	99	65.371	Notamacropus_eugenii
ENSRNOG00000022354	Pusl1	98	79.032	ENSODEG00000008247	PUSL1	89	78.339	Octodon_degus
ENSRNOG00000022354	Pusl1	90	31.304	ENSODEG00000008248	PUS1	52	30.729	Octodon_degus
ENSRNOG00000022354	Pusl1	100	51.538	ENSONIG00000019361	pusl1	99	49.492	Oreochromis_niloticus
ENSRNOG00000022354	Pusl1	94	48.551	ENSORLG00000016228	pusl1	93	48.551	Oryzias_latipes
ENSRNOG00000022354	Pusl1	94	49.275	ENSORLG00020013710	pusl1	93	49.275	Oryzias_latipes_hni
ENSRNOG00000022354	Pusl1	98	46.032	ENSORLG00015008715	pusl1	98	48.214	Oryzias_latipes_hsok
ENSRNOG00000022354	Pusl1	94	49.819	ENSOMEG00000018897	pusl1	94	49.819	Oryzias_melastigma
ENSRNOG00000022354	Pusl1	97	82.927	ENSOGAG00000031692	PUSL1	98	80.851	Otolemur_garnettii
ENSRNOG00000022354	Pusl1	98	84.677	ENSOARG00000004905	PUSL1	100	81.579	Ovis_aries
ENSRNOG00000022354	Pusl1	98	85.484	ENSPPAG00000029283	PUSL1	96	81.100	Pan_paniscus
ENSRNOG00000022354	Pusl1	98	80.645	ENSPPRG00000023329	PUSL1	95	79.021	Panthera_pardus
ENSRNOG00000022354	Pusl1	98	81.452	ENSPTIG00000018532	PUSL1	97	79.389	Panthera_tigris_altaica
ENSRNOG00000022354	Pusl1	98	85.484	ENSPTRG00000000021	PUSL1	96	81.100	Pan_troglodytes
ENSRNOG00000022354	Pusl1	98	85.484	ENSPANG00000000591	PUSL1	96	81.443	Papio_anubis
ENSRNOG00000022354	Pusl1	95	48.561	ENSPKIG00000002447	pusl1	96	48.561	Paramormyrops_kingsleyae
ENSRNOG00000022354	Pusl1	94	54.098	ENSPSIG00000002781	PUSL1	92	55.823	Pelodiscus_sinensis
ENSRNOG00000022354	Pusl1	98	46.825	ENSPMGG00000011051	pusl1	99	47.273	Periophthalmus_magnuspinnatus
ENSRNOG00000022354	Pusl1	100	89.691	ENSPEMG00000013541	Pusl1	100	89.691	Peromyscus_maniculatus_bairdii
ENSRNOG00000022354	Pusl1	99	64.483	ENSPCIG00000007816	-	66	64.483	Phascolarctos_cinereus
ENSRNOG00000022354	Pusl1	94	54.098	ENSPFOG00000015448	pusl1	91	53.986	Poecilia_formosa
ENSRNOG00000022354	Pusl1	94	54.098	ENSPLAG00000004348	pusl1	92	53.986	Poecilia_latipinna
ENSRNOG00000022354	Pusl1	94	54.098	ENSPMEG00000000931	pusl1	92	53.986	Poecilia_mexicana
ENSRNOG00000022354	Pusl1	94	54.167	ENSPREG00000002324	pusl1	92	54.015	Poecilia_reticulata
ENSRNOG00000022354	Pusl1	98	83.871	ENSPPYG00000002014	PUSL1	90	78.800	Pongo_abelii
ENSRNOG00000022354	Pusl1	98	58.871	ENSPCAG00000002272	PUSL1	99	67.490	Procavia_capensis
ENSRNOG00000022354	Pusl1	99	83.333	ENSPCOG00000024685	-	89	83.333	Propithecus_coquereli
ENSRNOG00000022354	Pusl1	97	84.553	ENSPVAG00000001016	PUSL1	71	83.333	Pteropus_vampyrus
ENSRNOG00000022354	Pusl1	81	48.319	ENSPNYG00000006588	pusl1	98	48.319	Pundamilia_nyererei
ENSRNOG00000022354	Pusl1	96	49.643	ENSPNAG00000024441	pusl1	96	49.643	Pygocentrus_nattereri
ENSRNOG00000022354	Pusl1	98	85.484	ENSRBIG00000036842	PUSL1	96	81.443	Rhinopithecus_bieti
ENSRNOG00000022354	Pusl1	98	84.677	ENSRROG00000030704	PUSL1	96	81.100	Rhinopithecus_roxellana
ENSRNOG00000022354	Pusl1	97	84.553	ENSSBOG00000032249	PUSL1	96	80.755	Saimiri_boliviensis_boliviensis
ENSRNOG00000022354	Pusl1	52	64.667	ENSSHAG00000004840	-	89	59.064	Sarcophilus_harrisii
ENSRNOG00000022354	Pusl1	97	50.175	ENSSFOG00015008281	pusl1	94	50.175	Scleropages_formosus
ENSRNOG00000022354	Pusl1	98	47.387	ENSSMAG00000007187	pusl1	92	47.387	Scophthalmus_maximus
ENSRNOG00000022354	Pusl1	99	48.438	ENSSDUG00000000287	pusl1	99	44.710	Seriola_dumerili
ENSRNOG00000022354	Pusl1	95	48.921	ENSSLDG00000009605	pusl1	88	48.921	Seriola_lalandi_dorsalis
ENSRNOG00000022354	Pusl1	65	77.660	ENSSARG00000005323	-	100	77.660	Sorex_araneus
ENSRNOG00000022354	Pusl1	98	42.568	ENSSPAG00000002528	pusl1	99	45.055	Stegastes_partitus
ENSRNOG00000022354	Pusl1	100	78.694	ENSSSCG00000003338	PUSL1	95	78.694	Sus_scrofa
ENSRNOG00000022354	Pusl1	93	54.380	ENSTGUG00000003214	PUSL1	100	53.684	Taeniopygia_guttata
ENSRNOG00000022354	Pusl1	95	48.201	ENSTRUG00000010102	pusl1	93	48.201	Takifugu_rubripes
ENSRNOG00000022354	Pusl1	98	45.238	ENSTNIG00000005789	pusl1	81	43.956	Tetraodon_nigroviridis
ENSRNOG00000022354	Pusl1	93	82.203	ENSTBEG00000005001	PUSL1	96	57.732	Tupaia_belangeri
ENSRNOG00000022354	Pusl1	98	71.777	ENSTTRG00000017030	PUSL1	95	71.777	Tursiops_truncatus
ENSRNOG00000022354	Pusl1	98	83.065	ENSUAMG00000012801	PUSL1	81	79.098	Ursus_americanus
ENSRNOG00000022354	Pusl1	98	82.258	ENSUMAG00000002084	PUSL1	81	78.689	Ursus_maritimus
ENSRNOG00000022354	Pusl1	98	80.645	ENSVVUG00000004320	PUSL1	93	69.876	Vulpes_vulpes
ENSRNOG00000022354	Pusl1	78	50.877	ENSXETG00000011145	pusl1	99	50.877	Xenopus_tropicalis
ENSRNOG00000022354	Pusl1	98	53.175	ENSXCOG00000017748	pusl1	98	51.613	Xiphophorus_couchianus
ENSRNOG00000022354	Pusl1	94	53.986	ENSXMAG00000018846	pusl1	92	53.986	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function
GO:0031119	tRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0043231	intracellular membrane-bounded organelle	-	IEA	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0106029	tRNA pseudouridine synthase activity	-	IEA	Function