EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022502 (Gene tree)
Gene ID: 303346
Gene Symbol: Nsrp1
Alias: Ccdc55|LOC303346|MGC116261|NSrp70|RGD1309863
Full Name: nuclear speckle splicing regulatory protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 35070 bases
Position: chr10:63098116-63133185
Accession: 1309863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000036224	DUF2040	PF09745.9	1.7e-36	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000030749	-	3359	XM_008768018	ENSRNOP00000036224	547 (aa)	-	Q4FZU3

Gene Model

Click here to download ENSRNOG00000022502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022502	Nsrp1	100	72.987	ENSG00000126653	NSRP1	100	96.154	Homo_sapiens
ENSRNOG00000022502	Nsrp1	61	68.421	ENSAPOG00000019041	nsrp1	100	41.259	Acanthochromis_polyacanthus
ENSRNOG00000022502	Nsrp1	93	71.042	ENSAMEG00000004028	NSRP1	100	70.849	Ailuropoda_melanoleuca
ENSRNOG00000022502	Nsrp1	50	66.667	ENSACIG00000014008	nsrp1	99	41.503	Amphilophus_citrinellus
ENSRNOG00000022502	Nsrp1	57	66.667	ENSAPEG00000018767	nsrp1	99	38.654	Amphiprion_percula
ENSRNOG00000022502	Nsrp1	50	71.053	ENSATEG00000006815	nsrp1	100	41.906	Anabas_testudineus
ENSRNOG00000022502	Nsrp1	99	51.675	ENSAPLG00000011228	NSRP1	99	52.120	Anas_platyrhynchos
ENSRNOG00000022502	Nsrp1	99	47.550	ENSACAG00000011582	NSRP1	99	48.639	Anolis_carolinensis
ENSRNOG00000022502	Nsrp1	100	73.703	ENSANAG00000036718	NSRP1	100	73.703	Aotus_nancymaae
ENSRNOG00000022502	Nsrp1	51	67.164	ENSAMXG00000038882	nsrp1	100	42.679	Astyanax_mexicanus
ENSRNOG00000022502	Nsrp1	100	70.463	ENSBTAG00000019341	NSRP1	100	70.463	Bos_taurus
ENSRNOG00000022502	Nsrp1	100	72.093	ENSCJAG00000013710	NSRP1	100	72.093	Callithrix_jacchus
ENSRNOG00000022502	Nsrp1	100	71.813	ENSCAFG00000018976	NSRP1	100	71.993	Canis_familiaris
ENSRNOG00000022502	Nsrp1	100	71.813	ENSCAFG00020011309	NSRP1	100	71.993	Canis_lupus_dingo
ENSRNOG00000022502	Nsrp1	100	70.916	ENSCHIG00000021222	NSRP1	100	70.916	Capra_hircus
ENSRNOG00000022502	Nsrp1	100	72.906	ENSTSYG00000030918	NSRP1	100	73.262	Carlito_syrichta
ENSRNOG00000022502	Nsrp1	99	72.545	ENSCPOG00000031448	NSRP1	98	72.727	Cavia_porcellus
ENSRNOG00000022502	Nsrp1	90	71.287	ENSCCAG00000025135	NSRP1	100	71.287	Cebus_capucinus
ENSRNOG00000022502	Nsrp1	100	56.703	ENSCATG00000031727	-	100	56.703	Cercocebus_atys
ENSRNOG00000022502	Nsrp1	100	72.451	ENSCATG00000038363	NSRP1	100	72.451	Cercocebus_atys
ENSRNOG00000022502	Nsrp1	100	73.874	ENSCLAG00000005413	NSRP1	100	74.054	Chinchilla_lanigera
ENSRNOG00000022502	Nsrp1	100	72.451	ENSCSAG00000006841	NSRP1	100	72.451	Chlorocebus_sabaeus
ENSRNOG00000022502	Nsrp1	100	52.941	ENSCPBG00000020074	NSRP1	98	54.498	Chrysemys_picta_bellii
ENSRNOG00000022502	Nsrp1	100	72.272	ENSCANG00000017067	NSRP1	100	72.272	Colobus_angolensis_palliatus
ENSRNOG00000022502	Nsrp1	100	78.040	ENSCGRG00001017048	Nsrp1	100	78.040	Cricetulus_griseus_chok1gshd
ENSRNOG00000022502	Nsrp1	100	77.858	ENSCGRG00000010270	Nsrp1	100	77.858	Cricetulus_griseus_crigri
ENSRNOG00000022502	Nsrp1	63	70.732	ENSCVAG00000021345	nsrp1	96	40.221	Cyprinodon_variegatus
ENSRNOG00000022502	Nsrp1	99	49.912	ENSDNOG00000046565	-	99	49.912	Dasypus_novemcinctus
ENSRNOG00000022502	Nsrp1	100	69.464	ENSDNOG00000014737	-	100	69.464	Dasypus_novemcinctus
ENSRNOG00000022502	Nsrp1	93	68.008	ENSDNOG00000047758	-	100	68.008	Dasypus_novemcinctus
ENSRNOG00000022502	Nsrp1	100	70.557	ENSDORG00000010440	Nsrp1	100	70.557	Dipodomys_ordii
ENSRNOG00000022502	Nsrp1	85	65.828	ENSETEG00000015217	NSRP1	96	65.618	Echinops_telfairi
ENSRNOG00000022502	Nsrp1	100	72.291	ENSEASG00005009692	NSRP1	100	72.469	Equus_asinus_asinus
ENSRNOG00000022502	Nsrp1	100	72.064	ENSECAG00000017076	NSRP1	100	72.242	Equus_caballus
ENSRNOG00000022502	Nsrp1	90	69.444	ENSFCAG00000039697	NSRP1	100	70.040	Felis_catus
ENSRNOG00000022502	Nsrp1	99	48.850	ENSFALG00000006216	NSRP1	98	50.264	Ficedula_albicollis
ENSRNOG00000022502	Nsrp1	100	50.950	ENSGALG00000004186	NSRP1	100	52.265	Gallus_gallus
ENSRNOG00000022502	Nsrp1	61	76.316	ENSGAFG00000000710	nsrp1	100	42.553	Gambusia_affinis
ENSRNOG00000022502	Nsrp1	100	52.289	ENSGAGG00000011536	NSRP1	100	51.560	Gopherus_agassizii
ENSRNOG00000022502	Nsrp1	100	72.987	ENSGGOG00000009216	NSRP1	100	72.987	Gorilla_gorilla
ENSRNOG00000022502	Nsrp1	100	73.310	ENSSTOG00000028001	NSRP1	100	73.488	Ictidomys_tridecemlineatus
ENSRNOG00000022502	Nsrp1	99	74.141	ENSJJAG00000011862	Nsrp1	99	74.141	Jaculus_jaculus
ENSRNOG00000022502	Nsrp1	100	45.378	ENSLACG00000014674	NSRP1	100	46.633	Latimeria_chalumnae
ENSRNOG00000022502	Nsrp1	93	61.197	ENSLAFG00000013731	NSRP1	74	77.039	Loxodonta_africana
ENSRNOG00000022502	Nsrp1	100	52.688	ENSMFAG00000038296	-	100	53.584	Macaca_fascicularis
ENSRNOG00000022502	Nsrp1	100	72.272	ENSMFAG00000014745	NSRP1	100	72.272	Macaca_fascicularis
ENSRNOG00000022502	Nsrp1	99	70.789	ENSMMUG00000012121	NSRP1	100	70.891	Macaca_mulatta
ENSRNOG00000022502	Nsrp1	100	72.451	ENSMNEG00000039986	NSRP1	100	72.451	Macaca_nemestrina
ENSRNOG00000022502	Nsrp1	100	72.272	ENSMLEG00000042611	NSRP1	100	72.272	Mandrillus_leucophaeus
ENSRNOG00000022502	Nsrp1	52	61.224	ENSMAMG00000020195	nsrp1	100	41.802	Mastacembelus_armatus
ENSRNOG00000022502	Nsrp1	100	51.053	ENSMGAG00000006240	NSRP1	100	51.845	Meleagris_gallopavo
ENSRNOG00000022502	Nsrp1	100	72.581	ENSMICG00000006365	NSRP1	100	72.581	Microcebus_murinus
ENSRNOG00000022502	Nsrp1	100	76.685	ENSMOCG00000019716	Nsrp1	100	76.685	Microtus_ochrogaster
ENSRNOG00000022502	Nsrp1	64	62.983	ENSMODG00000009868	NSRP1	100	53.641	Monodelphis_domestica
ENSRNOG00000022502	Nsrp1	51	66.667	ENSMALG00000018409	nsrp1	99	41.392	Monopterus_albus
ENSRNOG00000022502	Nsrp1	100	87.978	MGP_CAROLIEiJ_G0016769	Nsrp1	100	87.978	Mus_caroli
ENSRNOG00000022502	Nsrp1	100	88.342	ENSMUSG00000037958	Nsrp1	96	93.333	Mus_musculus
ENSRNOG00000022502	Nsrp1	100	89.071	MGP_PahariEiJ_G0017906	Nsrp1	96	93.333	Mus_pahari
ENSRNOG00000022502	Nsrp1	100	71.429	ENSMLUG00000017469	NSRP1	100	71.429	Myotis_lucifugus
ENSRNOG00000022502	Nsrp1	100	73.345	ENSNLEG00000003642	NSRP1	100	73.345	Nomascus_leucogenys
ENSRNOG00000022502	Nsrp1	100	54.196	ENSMEUG00000012486	NSRP1	100	55.166	Notamacropus_eugenii
ENSRNOG00000022502	Nsrp1	93	66.344	ENSOPRG00000007870	NSRP1	100	66.344	Ochotona_princeps
ENSRNOG00000022502	Nsrp1	99	70.567	ENSODEG00000009225	NSRP1	99	70.567	Octodon_degus
ENSRNOG00000022502	Nsrp1	90	56.634	ENSOANG00000012656	NSRP1	100	57.396	Ornithorhynchus_anatinus
ENSRNOG00000022502	Nsrp1	100	70.088	ENSOCUG00000000155	NSRP1	100	69.912	Oryctolagus_cuniculus
ENSRNOG00000022502	Nsrp1	51	69.444	ENSORLG00000003135	nsrp1	83	58.871	Oryzias_latipes
ENSRNOG00000022502	Nsrp1	99	59.066	ENSOGAG00000032682	-	99	57.651	Otolemur_garnettii
ENSRNOG00000022502	Nsrp1	93	65.209	ENSOGAG00000000820	-	100	65.209	Otolemur_garnettii
ENSRNOG00000022502	Nsrp1	93	69.171	ENSOARG00000009006	NSRP1	100	69.171	Ovis_aries
ENSRNOG00000022502	Nsrp1	100	72.987	ENSPPAG00000003543	NSRP1	100	72.987	Pan_paniscus
ENSRNOG00000022502	Nsrp1	100	71.505	ENSPPRG00000022797	NSRP1	100	72.043	Panthera_pardus
ENSRNOG00000022502	Nsrp1	100	71.326	ENSPTIG00000012822	NSRP1	100	71.864	Panthera_tigris_altaica
ENSRNOG00000022502	Nsrp1	100	73.166	ENSPTRG00000008957	NSRP1	100	73.166	Pan_troglodytes
ENSRNOG00000022502	Nsrp1	100	69.369	ENSPANG00000023146	NSRP1	100	69.369	Papio_anubis
ENSRNOG00000022502	Nsrp1	98	50.542	ENSPSIG00000008905	NSRP1	100	51.444	Pelodiscus_sinensis
ENSRNOG00000022502	Nsrp1	100	77.596	ENSPEMG00000021659	Nsrp1	100	78.040	Peromyscus_maniculatus_bairdii
ENSRNOG00000022502	Nsrp1	90	52.099	ENSPCIG00000022736	-	100	52.863	Phascolarctos_cinereus
ENSRNOG00000022502	Nsrp1	54	52.843	ENSPFOG00000011548	nsrp1	73	47.273	Poecilia_formosa
ENSRNOG00000022502	Nsrp1	54	52.667	ENSPLAG00000005053	nsrp1	79	47.174	Poecilia_latipinna
ENSRNOG00000022502	Nsrp1	100	73.345	ENSPPYG00000008130	NSRP1	100	73.345	Pongo_abelii
ENSRNOG00000022502	Nsrp1	93	66.730	ENSPCAG00000000515	NSRP1	93	66.922	Procavia_capensis
ENSRNOG00000022502	Nsrp1	100	73.297	ENSPCOG00000022352	NSRP1	100	73.297	Propithecus_coquereli
ENSRNOG00000022502	Nsrp1	100	72.613	ENSPVAG00000009281	NSRP1	100	72.793	Pteropus_vampyrus
ENSRNOG00000022502	Nsrp1	100	71.786	ENSRBIG00000044358	NSRP1	100	71.786	Rhinopithecus_bieti
ENSRNOG00000022502	Nsrp1	100	72.143	ENSRROG00000033310	NSRP1	100	72.143	Rhinopithecus_roxellana
ENSRNOG00000022502	Nsrp1	100	72.987	ENSSBOG00000022240	NSRP1	100	72.987	Saimiri_boliviensis_boliviensis
ENSRNOG00000022502	Nsrp1	90	52.727	ENSSHAG00000003513	-	100	53.131	Sarcophilus_harrisii
ENSRNOG00000022502	Nsrp1	81	60.000	ENSSMAG00000019880	nsrp1	100	41.398	Scophthalmus_maximus
ENSRNOG00000022502	Nsrp1	100	48.951	ENSSPUG00000004538	NSRP1	100	50.442	Sphenodon_punctatus
ENSRNOG00000022502	Nsrp1	100	70.863	ENSSSCG00000017795	NSRP1	100	67.368	Sus_scrofa
ENSRNOG00000022502	Nsrp1	100	49.735	ENSTGUG00000006486	NSRP1	100	49.912	Taeniopygia_guttata
ENSRNOG00000022502	Nsrp1	100	53.846	ENSTBEG00000003664	-	100	53.584	Tupaia_belangeri
ENSRNOG00000022502	Nsrp1	99	68.829	ENSTTRG00000016338	NSRP1	100	68.829	Tursiops_truncatus
ENSRNOG00000022502	Nsrp1	90	69.980	ENSUAMG00000019522	NSRP1	99	69.781	Ursus_americanus
ENSRNOG00000022502	Nsrp1	100	70.848	ENSUMAG00000010579	NSRP1	100	70.671	Ursus_maritimus
ENSRNOG00000022502	Nsrp1	80	92.683	ENSVPAG00000003569	NSRP1	80	92.683	Vicugna_pacos
ENSRNOG00000022502	Nsrp1	100	71.275	ENSVVUG00000021161	-	100	71.454	Vulpes_vulpes
ENSRNOG00000022502	Nsrp1	61	48.680	ENSXMAG00000029464	nsrp1	100	41.710	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISS	Process
GO:0003729	mRNA binding	-	ISO	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0016607	nuclear speck	-	ISS	Component
GO:0032502	developmental process	-	ISO	Process
GO:0032502	developmental process	-	ISS	Process
GO:1990904	ribonucleoprotein complex	-	ISO	Component
GO:1990904	ribonucleoprotein complex	-	ISS	Component