EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022730 (Gene tree)
Gene ID: 361783
Gene Symbol: Zfp57
Alias: MGC156546|zfp-57
Full Name: zinc finger protein 57
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 6368 bases
Position: chr20:2014170-2020537
Accession: 1302981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000011704	zf-C2H2	PF00096.26	2.8e-14	1	2
ENSRNOP00000011704	zf-C2H2	PF00096.26	2.8e-14	2	2
ENSRNOP00000011704	zf-met	PF12874.7	0.00033	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000011704	-	1896	XM_008772694	ENSRNOP00000011704	406 (aa)	XP_008770916	A0JPK3

Gene Model

Click here to download ENSRNOG00000022730's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000022730	Zfp57	63	31.933	ENSRNOG00000015188	AABR07053681.1	69	31.933
ENSRNOG00000022730	Zfp57	79	32.456	ENSRNOG00000016417	Zfp136	99	32.456
ENSRNOG00000022730	Zfp57	85	33.333	ENSRNOG00000049259	LOC102549842	76	35.714
ENSRNOG00000022730	Zfp57	83	30.476	ENSRNOG00000030517	Zfp879	98	30.476
ENSRNOG00000022730	Zfp57	71	32.727	ENSRNOG00000048394	Zfp560	67	32.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022730	Zfp57	92	37.028	ENSPANG00000029333	ZFP57	90	37.871	Papio_anubis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003677	DNA binding	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005720	nuclear heterochromatin	-	ISO	Component
GO:0006349	regulation of gene expression by genetic imprinting	-	ISO	Process
GO:0006349	regulation of gene expression by genetic imprinting	-	ISS	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0043045	DNA methylation involved in embryo development	-	ISO	Process
GO:0043045	DNA methylation involved in embryo development	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function