EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022877 (Gene tree)
Gene ID: 315170
Gene Symbol: Poldip3
Alias: LOC315170
Full Name: DNA polymerase delta interacting protein 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 28408 bases
Position: chr7:123992167-124020574
Accession: 1311073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070332	RRM_1	PF00076.22	2.8e-10	1	1
ENSRNOP00000052842	RRM_1	PF00076.22	3e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000082524	-	1781	-	ENSRNOP00000070332	402 (aa)	-	A0A0G2JXM5
ENSRNOT00000055988	-	3485	XM_006242090	ENSRNOP00000052842	420 (aa)	XP_006242152	D4A2B0

Gene Model

Click here to download ENSRNOG00000022877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022877	Poldip3	100	90.974	ENSG00000100227	POLDIP3	100	90.974	Homo_sapiens
ENSRNOG00000022877	Poldip3	91	41.631	ENSAPOG00000021223	poldip3	97	42.489	Acanthochromis_polyacanthus
ENSRNOG00000022877	Poldip3	100	90.261	ENSAMEG00000009522	POLDIP3	98	90.261	Ailuropoda_melanoleuca
ENSRNOG00000022877	Poldip3	100	46.861	ENSACIG00000023100	poldip3	100	46.861	Amphilophus_citrinellus
ENSRNOG00000022877	Poldip3	100	43.738	ENSAOCG00000004142	poldip3	100	43.931	Amphiprion_ocellaris
ENSRNOG00000022877	Poldip3	100	43.738	ENSAPEG00000013658	poldip3	100	43.931	Amphiprion_percula
ENSRNOG00000022877	Poldip3	91	43.830	ENSATEG00000009633	poldip3	97	44.043	Anabas_testudineus
ENSRNOG00000022877	Poldip3	99	74.876	ENSAPLG00000005154	POLDIP3	100	75.124	Anas_platyrhynchos
ENSRNOG00000022877	Poldip3	100	72.471	ENSACAG00000003515	POLDIP3	98	72.471	Anolis_carolinensis
ENSRNOG00000022877	Poldip3	100	91.449	ENSANAG00000033566	-	100	91.449	Aotus_nancymaae
ENSRNOG00000022877	Poldip3	75	80.528	ENSANAG00000024431	-	96	80.528	Aotus_nancymaae
ENSRNOG00000022877	Poldip3	100	44.231	ENSACLG00000016753	poldip3	86	44.423	Astatotilapia_calliptera
ENSRNOG00000022877	Poldip3	91	46.723	ENSAMXG00000007939	poldip3	99	46.934	Astyanax_mexicanus
ENSRNOG00000022877	Poldip3	100	92.162	ENSBTAG00000016511	POLDIP3	100	92.162	Bos_taurus
ENSRNOG00000022877	Poldip3	100	90.802	ENSCJAG00000009628	POLDIP3	100	90.802	Callithrix_jacchus
ENSRNOG00000022877	Poldip3	100	91.449	ENSCAFG00000000959	POLDIP3	100	91.449	Canis_familiaris
ENSRNOG00000022877	Poldip3	100	85.986	ENSCAFG00020000227	POLDIP3	100	85.986	Canis_lupus_dingo
ENSRNOG00000022877	Poldip3	100	92.162	ENSCHIG00000020171	POLDIP3	100	92.162	Capra_hircus
ENSRNOG00000022877	Poldip3	100	92.637	ENSTSYG00000007189	POLDIP3	100	92.637	Carlito_syrichta
ENSRNOG00000022877	Poldip3	100	84.901	ENSCAPG00000006798	POLDIP3	99	84.901	Cavia_aperea
ENSRNOG00000022877	Poldip3	100	86.256	ENSCPOG00000019524	POLDIP3	100	87.204	Cavia_porcellus
ENSRNOG00000022877	Poldip3	100	90.736	ENSCCAG00000027969	-	100	90.736	Cebus_capucinus
ENSRNOG00000022877	Poldip3	100	77.305	ENSCCAG00000011395	-	100	77.305	Cebus_capucinus
ENSRNOG00000022877	Poldip3	100	90.974	ENSCATG00000029583	POLDIP3	100	90.974	Cercocebus_atys
ENSRNOG00000022877	Poldip3	100	89.311	ENSCLAG00000016864	POLDIP3	100	89.311	Chinchilla_lanigera
ENSRNOG00000022877	Poldip3	100	91.211	ENSCSAG00000005654	POLDIP3	100	91.211	Chlorocebus_sabaeus
ENSRNOG00000022877	Poldip3	100	75.592	ENSCPBG00000021819	POLDIP3	87	75.592	Chrysemys_picta_bellii
ENSRNOG00000022877	Poldip3	100	91.211	ENSCANG00000027664	POLDIP3	100	91.211	Colobus_angolensis_palliatus
ENSRNOG00000022877	Poldip3	100	92.637	ENSCGRG00001004211	-	100	92.637	Cricetulus_griseus_chok1gshd
ENSRNOG00000022877	Poldip3	99	94.514	ENSCGRG00000009374	-	100	94.514	Cricetulus_griseus_crigri
ENSRNOG00000022877	Poldip3	96	42.944	ENSCSEG00000007165	poldip3	100	42.664	Cynoglossus_semilaevis
ENSRNOG00000022877	Poldip3	91	42.531	ENSCVAG00000004370	poldip3	98	42.739	Cyprinodon_variegatus
ENSRNOG00000022877	Poldip3	96	40.945	ENSDARG00000099375	poldip3	98	42.085	Danio_rerio
ENSRNOG00000022877	Poldip3	100	91.358	ENSDNOG00000037211	-	100	91.211	Dasypus_novemcinctus
ENSRNOG00000022877	Poldip3	100	89.810	ENSDORG00000006590	Poldip3	100	90.047	Dipodomys_ordii
ENSRNOG00000022877	Poldip3	100	78.571	ENSETEG00000018022	POLDIP3	100	78.571	Echinops_telfairi
ENSRNOG00000022877	Poldip3	100	36.865	ENSEBUG00000001181	poldip3	93	36.865	Eptatretus_burgeri
ENSRNOG00000022877	Poldip3	100	90.974	ENSEASG00005000795	POLDIP3	100	90.974	Equus_asinus_asinus
ENSRNOG00000022877	Poldip3	100	90.736	ENSECAG00000018350	POLDIP3	100	90.736	Equus_caballus
ENSRNOG00000022877	Poldip3	86	72.928	ENSEEUG00000001290	POLDIP3	100	72.928	Erinaceus_europaeus
ENSRNOG00000022877	Poldip3	100	45.068	ENSELUG00000009005	poldip3	90	43.860	Esox_lucius
ENSRNOG00000022877	Poldip3	100	91.449	ENSFCAG00000032029	POLDIP3	100	91.449	Felis_catus
ENSRNOG00000022877	Poldip3	100	73.159	ENSFALG00000011621	POLDIP3	86	73.634	Ficedula_albicollis
ENSRNOG00000022877	Poldip3	100	87.173	ENSFDAG00000019550	POLDIP3	100	87.173	Fukomys_damarensis
ENSRNOG00000022877	Poldip3	100	48.879	ENSFHEG00000006083	poldip3	100	49.224	Fundulus_heteroclitus
ENSRNOG00000022877	Poldip3	100	47.930	ENSGMOG00000006232	poldip3	100	49.130	Gadus_morhua
ENSRNOG00000022877	Poldip3	100	73.634	ENSGALG00000011863	POLDIP3	100	73.634	Gallus_gallus
ENSRNOG00000022877	Poldip3	91	48.010	ENSGAFG00000017465	poldip3	95	48.395	Gambusia_affinis
ENSRNOG00000022877	Poldip3	100	47.210	ENSGACG00000007224	poldip3	100	47.854	Gasterosteus_aculeatus
ENSRNOG00000022877	Poldip3	100	76.123	ENSGAGG00000014629	POLDIP3	96	76.123	Gopherus_agassizii
ENSRNOG00000022877	Poldip3	100	90.974	ENSGGOG00000014961	POLDIP3	100	90.974	Gorilla_gorilla
ENSRNOG00000022877	Poldip3	100	44.146	ENSHBUG00000021806	poldip3	82	44.338	Haplochromis_burtoni
ENSRNOG00000022877	Poldip3	100	90.024	ENSHGLG00000013156	POLDIP3	100	90.024	Heterocephalus_glaber_female
ENSRNOG00000022877	Poldip3	100	90.024	ENSHGLG00100009086	POLDIP3	100	90.024	Heterocephalus_glaber_male
ENSRNOG00000022877	Poldip3	91	56.757	ENSHCOG00000005823	poldip3	98	42.095	Hippocampus_comes
ENSRNOG00000022877	Poldip3	100	46.061	ENSIPUG00000000564	poldip3	100	45.598	Ictalurus_punctatus
ENSRNOG00000022877	Poldip3	99	91.771	ENSSTOG00000008230	POLDIP3	100	91.771	Ictidomys_tridecemlineatus
ENSRNOG00000022877	Poldip3	100	90.974	ENSJJAG00000018034	Poldip3	100	90.974	Jaculus_jaculus
ENSRNOG00000022877	Poldip3	100	40.472	ENSKMAG00000013839	poldip3	100	40.864	Kryptolebias_marmoratus
ENSRNOG00000022877	Poldip3	100	90.499	ENSLAFG00000014901	POLDIP3	98	90.499	Loxodonta_africana
ENSRNOG00000022877	Poldip3	100	90.974	ENSMFAG00000044670	POLDIP3	100	90.974	Macaca_fascicularis
ENSRNOG00000022877	Poldip3	100	90.974	ENSMMUG00000047046	POLDIP3	100	90.974	Macaca_mulatta
ENSRNOG00000022877	Poldip3	100	90.974	ENSMNEG00000037068	POLDIP3	100	90.974	Macaca_nemestrina
ENSRNOG00000022877	Poldip3	100	42.012	ENSMAMG00000009151	poldip3	87	70.552	Mastacembelus_armatus
ENSRNOG00000022877	Poldip3	100	44.146	ENSMZEG00005005201	poldip3	100	44.722	Maylandia_zebra
ENSRNOG00000022877	Poldip3	99	72.886	ENSMGAG00000011986	POLDIP3	100	73.134	Meleagris_gallopavo
ENSRNOG00000022877	Poldip3	99	89.303	ENSMAUG00000014002	Poldip3	99	88.537	Mesocricetus_auratus
ENSRNOG00000022877	Poldip3	100	91.686	ENSMICG00000041767	POLDIP3	100	91.686	Microcebus_murinus
ENSRNOG00000022877	Poldip3	100	94.299	ENSMOCG00000014101	Poldip3	100	94.299	Microtus_ochrogaster
ENSRNOG00000022877	Poldip3	91	45.573	ENSMMOG00000004982	poldip3	97	45.833	Mola_mola
ENSRNOG00000022877	Poldip3	99	75.682	ENSMODG00000006932	-	57	75.862	Monodelphis_domestica
ENSRNOG00000022877	Poldip3	100	95.952	MGP_CAROLIEiJ_G0020093	Poldip3	100	95.952	Mus_caroli
ENSRNOG00000022877	Poldip3	100	95.952	ENSMUSG00000041815	Poldip3	100	95.952	Mus_musculus
ENSRNOG00000022877	Poldip3	100	95.238	MGP_PahariEiJ_G0020100	Poldip3	100	95.238	Mus_pahari
ENSRNOG00000022877	Poldip3	100	96.429	MGP_SPRETEiJ_G0020991	Poldip3	100	96.429	Mus_spretus
ENSRNOG00000022877	Poldip3	100	90.261	ENSMPUG00000016314	POLDIP3	100	90.261	Mustela_putorius_furo
ENSRNOG00000022877	Poldip3	99	87.562	ENSMLUG00000012408	POLDIP3	99	85.442	Myotis_lucifugus
ENSRNOG00000022877	Poldip3	100	92.619	ENSNGAG00000000210	Poldip3	100	92.619	Nannospalax_galili
ENSRNOG00000022877	Poldip3	100	44.894	ENSNBRG00000001837	poldip3	100	45.087	Neolamprologus_brichardi
ENSRNOG00000022877	Poldip3	100	86.986	ENSNLEG00000015950	POLDIP3	100	86.986	Nomascus_leucogenys
ENSRNOG00000022877	Poldip3	100	77.910	ENSMEUG00000013932	POLDIP3	100	77.910	Notamacropus_eugenii
ENSRNOG00000022877	Poldip3	100	89.549	ENSODEG00000014224	POLDIP3	100	89.549	Octodon_degus
ENSRNOG00000022877	Poldip3	100	44.146	ENSONIG00000008367	poldip3	100	44.338	Oreochromis_niloticus
ENSRNOG00000022877	Poldip3	99	69.363	ENSOANG00000011029	POLDIP3	98	69.082	Ornithorhynchus_anatinus
ENSRNOG00000022877	Poldip3	100	88.095	ENSOCUG00000016133	POLDIP3	99	88.095	Oryctolagus_cuniculus
ENSRNOG00000022877	Poldip3	100	45.964	ENSORLG00000014799	poldip3	100	47.661	Oryzias_latipes
ENSRNOG00000022877	Poldip3	100	41.270	ENSORLG00020006113	poldip3	100	41.667	Oryzias_latipes_hni
ENSRNOG00000022877	Poldip3	100	40.492	ENSORLG00015018234	poldip3	100	42.605	Oryzias_latipes_hsok
ENSRNOG00000022877	Poldip3	100	41.634	ENSOMEG00000007071	poldip3	100	41.634	Oryzias_melastigma
ENSRNOG00000022877	Poldip3	100	91.924	ENSOGAG00000008216	POLDIP3	100	91.924	Otolemur_garnettii
ENSRNOG00000022877	Poldip3	100	92.162	ENSOARG00000018993	POLDIP3	100	92.162	Ovis_aries
ENSRNOG00000022877	Poldip3	100	91.211	ENSPPAG00000036619	POLDIP3	100	91.211	Pan_paniscus
ENSRNOG00000022877	Poldip3	100	91.211	ENSPPRG00000021188	POLDIP3	100	91.211	Panthera_pardus
ENSRNOG00000022877	Poldip3	100	91.211	ENSPTIG00000021396	POLDIP3	100	91.211	Panthera_tigris_altaica
ENSRNOG00000022877	Poldip3	100	91.211	ENSPTRG00000014460	POLDIP3	100	91.211	Pan_troglodytes
ENSRNOG00000022877	Poldip3	100	90.974	ENSPANG00000007026	POLDIP3	100	90.974	Papio_anubis
ENSRNOG00000022877	Poldip3	96	46.377	ENSPKIG00000002188	poldip3	90	47.205	Paramormyrops_kingsleyae
ENSRNOG00000022877	Poldip3	89	43.946	ENSPKIG00000007231	poldip3	93	42.412	Paramormyrops_kingsleyae
ENSRNOG00000022877	Poldip3	99	75.186	ENSPSIG00000006347	POLDIP3	100	75.434	Pelodiscus_sinensis
ENSRNOG00000022877	Poldip3	100	94.787	ENSPEMG00000021065	Poldip3	100	94.787	Peromyscus_maniculatus_bairdii
ENSRNOG00000022877	Poldip3	100	38.780	ENSPMAG00000004894	poldip3	93	38.780	Petromyzon_marinus
ENSRNOG00000022877	Poldip3	100	77.910	ENSPCIG00000026194	POLDIP3	100	77.910	Phascolarctos_cinereus
ENSRNOG00000022877	Poldip3	100	46.875	ENSPFOG00000000926	poldip3	94	53.846	Poecilia_formosa
ENSRNOG00000022877	Poldip3	100	47.640	ENSPLAG00000005558	poldip3	100	47.640	Poecilia_latipinna
ENSRNOG00000022877	Poldip3	100	42.722	ENSPMEG00000018286	poldip3	95	51.151	Poecilia_mexicana
ENSRNOG00000022877	Poldip3	100	39.231	ENSPREG00000016505	poldip3	100	39.615	Poecilia_reticulata
ENSRNOG00000022877	Poldip3	100	91.211	ENSPPYG00000011899	POLDIP3	100	91.211	Pongo_abelii
ENSRNOG00000022877	Poldip3	100	91.211	ENSPCAG00000009424	POLDIP3	100	91.211	Procavia_capensis
ENSRNOG00000022877	Poldip3	100	92.399	ENSPCOG00000020271	POLDIP3	100	92.399	Propithecus_coquereli
ENSRNOG00000022877	Poldip3	100	89.549	ENSPVAG00000014131	POLDIP3	100	89.549	Pteropus_vampyrus
ENSRNOG00000022877	Poldip3	100	44.231	ENSPNYG00000020333	poldip3	100	44.808	Pundamilia_nyererei
ENSRNOG00000022877	Poldip3	100	44.882	ENSPNAG00000023036	poldip3	100	46.063	Pygocentrus_nattereri
ENSRNOG00000022877	Poldip3	100	91.449	ENSRBIG00000041676	POLDIP3	100	91.449	Rhinopithecus_bieti
ENSRNOG00000022877	Poldip3	100	91.449	ENSRROG00000022379	POLDIP3	100	91.449	Rhinopithecus_roxellana
ENSRNOG00000022877	Poldip3	100	72.922	ENSSBOG00000025315	-	100	72.922	Saimiri_boliviensis_boliviensis
ENSRNOG00000022877	Poldip3	100	90.974	ENSSBOG00000021779	-	100	90.974	Saimiri_boliviensis_boliviensis
ENSRNOG00000022877	Poldip3	100	74.822	ENSSHAG00000005316	POLDIP3	98	74.822	Sarcophilus_harrisii
ENSRNOG00000022877	Poldip3	96	47.737	ENSSFOG00015012429	-	97	49.691	Scleropages_formosus
ENSRNOG00000022877	Poldip3	100	40.113	ENSSFOG00015012582	poldip3	100	40.832	Scleropages_formosus
ENSRNOG00000022877	Poldip3	100	46.171	ENSSMAG00000004609	poldip3	100	46.309	Scophthalmus_maximus
ENSRNOG00000022877	Poldip3	100	40.270	ENSSDUG00000016881	poldip3	94	49.500	Seriola_dumerili
ENSRNOG00000022877	Poldip3	100	43.378	ENSSLDG00000024763	poldip3	100	43.774	Seriola_lalandi_dorsalis
ENSRNOG00000022877	Poldip3	99	78.109	ENSSARG00000011587	POLDIP3	95	78.109	Sorex_araneus
ENSRNOG00000022877	Poldip3	100	74.057	ENSSPUG00000005362	POLDIP3	96	74.057	Sphenodon_punctatus
ENSRNOG00000022877	Poldip3	100	92.399	ENSSSCG00000000039	POLDIP3	100	92.399	Sus_scrofa
ENSRNOG00000022877	Poldip3	100	74.468	ENSTGUG00000009622	-	98	74.468	Taeniopygia_guttata
ENSRNOG00000022877	Poldip3	100	46.341	ENSTRUG00000006604	poldip3	100	45.898	Takifugu_rubripes
ENSRNOG00000022877	Poldip3	100	48.894	ENSTNIG00000010841	poldip3	100	48.894	Tetraodon_nigroviridis
ENSRNOG00000022877	Poldip3	100	90.024	ENSTBEG00000010978	POLDIP3	100	90.024	Tupaia_belangeri
ENSRNOG00000022877	Poldip3	99	91.521	ENSTTRG00000015129	POLDIP3	100	91.521	Tursiops_truncatus
ENSRNOG00000022877	Poldip3	100	90.261	ENSUAMG00000026181	POLDIP3	100	90.261	Ursus_americanus
ENSRNOG00000022877	Poldip3	97	90.561	ENSUMAG00000020385	POLDIP3	98	87.681	Ursus_maritimus
ENSRNOG00000022877	Poldip3	100	91.211	ENSVVUG00000002231	POLDIP3	100	91.211	Vulpes_vulpes
ENSRNOG00000022877	Poldip3	100	60.586	ENSXETG00000013412	poldip3	100	59.424	Xenopus_tropicalis
ENSRNOG00000022877	Poldip3	91	46.465	ENSXCOG00000015952	poldip3	95	47.222	Xiphophorus_couchianus
ENSRNOG00000022877	Poldip3	100	39.777	ENSXMAG00000006152	poldip3	100	39.963	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000346	transcription export complex	-	ISO	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0005623	cell	-	IEA	Component
GO:0006406	mRNA export from nucleus	-	IEA	Process
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0016973	poly(A)+ mRNA export from nucleus	-	IEA	Process
GO:0016973	poly(A)+ mRNA export from nucleus	-	ISO	Process
GO:0036464	cytoplasmic ribonucleoprotein granule	-	IEA	Component
GO:0036464	cytoplasmic ribonucleoprotein granule	-	ISO	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045727	positive regulation of translation	-	ISO	Process