EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022896 (Gene tree)
Gene ID: 362967
Gene Symbol: Rrp7a
Alias: Cgi-96|LOC362967|RGD1311547
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 9889 bases
Position: chr7:123980251-123990139
Accession: 1311547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000033462	RRP7	PF12923.7	5.1e-34	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000034983	-	4545	-	ENSRNOP00000033462	280 (aa)	-	D4AE65

Gene Model

Click here to download ENSRNOG00000022896's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022896	Rrp7a	100	84.286	ENSG00000189306	RRP7A	100	84.286	Homo_sapiens
ENSRNOG00000022896	Rrp7a	93	44.737	ENSAPOG00000021250	rrp7a	99	44.528	Acanthochromis_polyacanthus
ENSRNOG00000022896	Rrp7a	100	83.929	ENSAMEG00000009503	RRP7A	100	83.929	Ailuropoda_melanoleuca
ENSRNOG00000022896	Rrp7a	93	47.584	ENSACIG00000023067	rrp7a	94	47.015	Amphilophus_citrinellus
ENSRNOG00000022896	Rrp7a	96	45.818	ENSAOCG00000004115	rrp7a	98	45.455	Amphiprion_ocellaris
ENSRNOG00000022896	Rrp7a	96	45.818	ENSAPEG00000013688	rrp7a	98	46.183	Amphiprion_percula
ENSRNOG00000022896	Rrp7a	93	45.693	ENSATEG00000009664	rrp7a	94	46.442	Anabas_testudineus
ENSRNOG00000022896	Rrp7a	95	62.313	ENSACAG00000003579	RRP7A	96	62.313	Anolis_carolinensis
ENSRNOG00000022896	Rrp7a	100	85.357	ENSANAG00000031200	RRP7A	100	85.357	Aotus_nancymaae
ENSRNOG00000022896	Rrp7a	98	47.143	ENSACLG00000016790	rrp7a	99	47.857	Astatotilapia_calliptera
ENSRNOG00000022896	Rrp7a	95	45.255	ENSAMXG00000007921	rrp7a	92	45.255	Astyanax_mexicanus
ENSRNOG00000022896	Rrp7a	95	82.022	ENSBTAG00000016510	RRP7A	100	80.000	Bos_taurus
ENSRNOG00000022896	Rrp7a	100	83.214	ENSCJAG00000009668	RRP7A	100	83.214	Callithrix_jacchus
ENSRNOG00000022896	Rrp7a	95	84.644	ENSCAFG00000000965	RRP7	100	82.500	Canis_familiaris
ENSRNOG00000022896	Rrp7a	95	84.644	ENSCAFG00020000251	RRP7A	100	82.500	Canis_lupus_dingo
ENSRNOG00000022896	Rrp7a	100	81.071	ENSCHIG00000026787	RRP7A	100	81.071	Capra_hircus
ENSRNOG00000022896	Rrp7a	100	83.929	ENSTSYG00000000198	RRP7A	100	83.929	Carlito_syrichta
ENSRNOG00000022896	Rrp7a	93	83.908	ENSCAPG00000002325	RRP7A	100	83.908	Cavia_aperea
ENSRNOG00000022896	Rrp7a	100	82.857	ENSCPOG00000030547	RRP7A	100	82.857	Cavia_porcellus
ENSRNOG00000022896	Rrp7a	100	68.929	ENSCCAG00000021486	RRP7A	100	68.929	Cebus_capucinus
ENSRNOG00000022896	Rrp7a	100	82.143	ENSCLAG00000016715	RRP7A	100	82.143	Chinchilla_lanigera
ENSRNOG00000022896	Rrp7a	100	83.929	ENSCSAG00000005657	RRP7A	100	83.929	Chlorocebus_sabaeus
ENSRNOG00000022896	Rrp7a	100	65.957	ENSCPBG00000021814	RRP7A	100	65.957	Chrysemys_picta_bellii
ENSRNOG00000022896	Rrp7a	79	41.593	ENSCSAVG00000002555	-	86	41.593	Ciona_savignyi
ENSRNOG00000022896	Rrp7a	81	85.903	ENSCGRG00001005713	-	100	85.903	Cricetulus_griseus_chok1gshd
ENSRNOG00000022896	Rrp7a	66	84.848	ENSCGRG00001021873	-	100	84.848	Cricetulus_griseus_chok1gshd
ENSRNOG00000022896	Rrp7a	99	81.429	ENSCGRG00000000552	-	99	81.429	Cricetulus_griseus_crigri
ENSRNOG00000022896	Rrp7a	100	86.786	ENSCGRG00000009567	-	100	86.786	Cricetulus_griseus_crigri
ENSRNOG00000022896	Rrp7a	91	78.431	ENSCGRG00000000540	-	100	78.431	Cricetulus_griseus_crigri
ENSRNOG00000022896	Rrp7a	93	47.368	ENSCSEG00000007185	rrp7a	94	47.368	Cynoglossus_semilaevis
ENSRNOG00000022896	Rrp7a	93	46.667	ENSCVAG00000004349	rrp7a	94	47.566	Cyprinodon_variegatus
ENSRNOG00000022896	Rrp7a	93	45.149	ENSDARG00000098934	rrp7a	96	45.522	Danio_rerio
ENSRNOG00000022896	Rrp7a	100	84.643	ENSDNOG00000037442	RRP7A	92	84.643	Dasypus_novemcinctus
ENSRNOG00000022896	Rrp7a	100	82.143	ENSDORG00000016138	Rrp7a	100	82.143	Dipodomys_ordii
ENSRNOG00000022896	Rrp7a	93	36.330	FBgn0031764	CG9107	98	36.330	Drosophila_melanogaster
ENSRNOG00000022896	Rrp7a	91	83.137	ENSETEG00000018025	RRP7A	100	83.137	Echinops_telfairi
ENSRNOG00000022896	Rrp7a	94	44.030	ENSEBUG00000010231	rrp7a	92	44.030	Eptatretus_burgeri
ENSRNOG00000022896	Rrp7a	100	85.000	ENSEASG00005000804	RRP7A	100	85.000	Equus_asinus_asinus
ENSRNOG00000022896	Rrp7a	100	84.643	ENSECAG00000015168	RRP7	100	84.643	Equus_caballus
ENSRNOG00000022896	Rrp7a	93	44.697	ENSELUG00000009036	rrp7a	94	45.833	Esox_lucius
ENSRNOG00000022896	Rrp7a	100	81.786	ENSFCAG00000033258	RRP7A	79	81.786	Felis_catus
ENSRNOG00000022896	Rrp7a	91	64.591	ENSFALG00000011635	RRP7A	87	64.479	Ficedula_albicollis
ENSRNOG00000022896	Rrp7a	99	83.154	ENSFDAG00000001321	RRP7A	100	83.154	Fukomys_damarensis
ENSRNOG00000022896	Rrp7a	93	48.148	ENSFHEG00000006098	rrp7a	91	48.148	Fundulus_heteroclitus
ENSRNOG00000022896	Rrp7a	93	46.792	ENSGMOG00000006218	rrp7a	99	47.547	Gadus_morhua
ENSRNOG00000022896	Rrp7a	95	64.419	ENSGALG00000011866	RRP7A	97	64.419	Gallus_gallus
ENSRNOG00000022896	Rrp7a	94	45.926	ENSGAFG00000017459	rrp7a	95	45.926	Gambusia_affinis
ENSRNOG00000022896	Rrp7a	93	47.566	ENSGACG00000007212	rrp7a	99	46.816	Gasterosteus_aculeatus
ENSRNOG00000022896	Rrp7a	94	68.939	ENSGAGG00000014621	RRP7A	95	68.939	Gopherus_agassizii
ENSRNOG00000022896	Rrp7a	100	82.143	ENSGGOG00000014957	RRP7A	100	82.143	Gorilla_gorilla
ENSRNOG00000022896	Rrp7a	98	47.143	ENSHBUG00000021788	rrp7a	99	47.857	Haplochromis_burtoni
ENSRNOG00000022896	Rrp7a	100	80.212	ENSHGLG00000015706	RRP7A	100	80.212	Heterocephalus_glaber_female
ENSRNOG00000022896	Rrp7a	98	81.387	ENSHGLG00100008187	-	99	81.387	Heterocephalus_glaber_male
ENSRNOG00000022896	Rrp7a	100	77.580	ENSHGLG00100009556	-	100	77.580	Heterocephalus_glaber_male
ENSRNOG00000022896	Rrp7a	93	46.468	ENSHCOG00000005813	rrp7a	82	46.840	Hippocampus_comes
ENSRNOG00000022896	Rrp7a	93	49.248	ENSIPUG00000000556	rrp7a	95	49.248	Ictalurus_punctatus
ENSRNOG00000022896	Rrp7a	100	84.286	ENSSTOG00000003111	RRP7A	100	84.286	Ictidomys_tridecemlineatus
ENSRNOG00000022896	Rrp7a	100	83.571	ENSJJAG00000019486	Rrp7a	100	83.571	Jaculus_jaculus
ENSRNOG00000022896	Rrp7a	93	46.442	ENSKMAG00000013819	rrp7a	94	46.442	Kryptolebias_marmoratus
ENSRNOG00000022896	Rrp7a	95	58.582	ENSLACG00000002670	RRP7A	98	58.582	Latimeria_chalumnae
ENSRNOG00000022896	Rrp7a	100	82.500	ENSLAFG00000012447	RRP7A	100	82.500	Loxodonta_africana
ENSRNOG00000022896	Rrp7a	100	85.000	ENSMFAG00000042855	RRP7A	100	85.000	Macaca_fascicularis
ENSRNOG00000022896	Rrp7a	100	75.694	ENSMFAG00000041664	-	100	75.694	Macaca_fascicularis
ENSRNOG00000022896	Rrp7a	100	79.286	ENSMMUG00000010193	-	100	79.286	Macaca_mulatta
ENSRNOG00000022896	Rrp7a	100	71.429	ENSMMUG00000009716	RRP7A	100	71.429	Macaca_mulatta
ENSRNOG00000022896	Rrp7a	100	84.643	ENSMNEG00000033705	RRP7A	100	84.643	Macaca_nemestrina
ENSRNOG00000022896	Rrp7a	99	74.910	ENSMLEG00000040230	RRP7A	99	75.862	Mandrillus_leucophaeus
ENSRNOG00000022896	Rrp7a	93	48.315	ENSMAMG00000009125	rrp7a	94	49.064	Mastacembelus_armatus
ENSRNOG00000022896	Rrp7a	98	47.143	ENSMZEG00005005197	rrp7a	99	47.857	Maylandia_zebra
ENSRNOG00000022896	Rrp7a	91	65.504	ENSMGAG00000011980	RRP7A	100	65.504	Meleagris_gallopavo
ENSRNOG00000022896	Rrp7a	100	86.786	ENSMICG00000041800	RRP7A	100	86.786	Microcebus_murinus
ENSRNOG00000022896	Rrp7a	95	45.387	ENSMMOG00000004976	rrp7a	96	45.756	Mola_mola
ENSRNOG00000022896	Rrp7a	94	70.037	ENSMODG00000006914	RRP7A	94	70.037	Monodelphis_domestica
ENSRNOG00000022896	Rrp7a	96	46.014	ENSMALG00000001933	rrp7a	98	46.739	Monopterus_albus
ENSRNOG00000022896	Rrp7a	100	94.286	MGP_CAROLIEiJ_G0020092	Rrp7a	100	94.286	Mus_caroli
ENSRNOG00000022896	Rrp7a	100	93.929	ENSMUSG00000018040	Rrp7a	98	98.000	Mus_musculus
ENSRNOG00000022896	Rrp7a	100	93.929	MGP_PahariEiJ_G0020099	Rrp7a	100	93.929	Mus_pahari
ENSRNOG00000022896	Rrp7a	100	94.286	MGP_SPRETEiJ_G0020990	Rrp7a	100	94.286	Mus_spretus
ENSRNOG00000022896	Rrp7a	100	82.143	ENSMPUG00000016315	RRP7A	100	82.143	Mustela_putorius_furo
ENSRNOG00000022896	Rrp7a	100	83.571	ENSMLUG00000012404	RRP7A	100	83.571	Myotis_lucifugus
ENSRNOG00000022896	Rrp7a	100	83.929	ENSNGAG00000010039	Rrp7a	100	83.929	Nannospalax_galili
ENSRNOG00000022896	Rrp7a	98	47.143	ENSNBRG00000001824	rrp7a	99	48.214	Neolamprologus_brichardi
ENSRNOG00000022896	Rrp7a	95	86.142	ENSNLEG00000036258	RRP7A	100	84.286	Nomascus_leucogenys
ENSRNOG00000022896	Rrp7a	100	80.000	ENSODEG00000015126	RRP7A	100	80.000	Octodon_degus
ENSRNOG00000022896	Rrp7a	93	47.191	ENSONIG00000008364	rrp7a	94	48.315	Oreochromis_niloticus
ENSRNOG00000022896	Rrp7a	82	64.224	ENSOANG00000015007	RRP7A	85	64.224	Ornithorhynchus_anatinus
ENSRNOG00000022896	Rrp7a	99	76.703	ENSOCUG00000027434	RRP7A	100	76.703	Oryctolagus_cuniculus
ENSRNOG00000022896	Rrp7a	93	46.067	ENSORLG00000014826	rrp7a	94	46.067	Oryzias_latipes
ENSRNOG00000022896	Rrp7a	93	46.067	ENSORLG00020006078	rrp7a	94	46.067	Oryzias_latipes_hni
ENSRNOG00000022896	Rrp7a	93	45.318	ENSORLG00015018190	rrp7a	94	45.693	Oryzias_latipes_hsok
ENSRNOG00000022896	Rrp7a	98	44.643	ENSOMEG00000007090	rrp7a	99	44.643	Oryzias_melastigma
ENSRNOG00000022896	Rrp7a	100	82.143	ENSOGAG00000002857	RRP7A	100	82.143	Otolemur_garnettii
ENSRNOG00000022896	Rrp7a	100	80.714	ENSOARG00000018986	RRP7A	100	80.714	Ovis_aries
ENSRNOG00000022896	Rrp7a	76	88.208	ENSPPAG00000021416	-	77	88.208	Pan_paniscus
ENSRNOG00000022896	Rrp7a	75	76.555	ENSPPAG00000029825	-	85	76.555	Pan_paniscus
ENSRNOG00000022896	Rrp7a	100	81.786	ENSPPRG00000022185	RRP7A	100	81.786	Panthera_pardus
ENSRNOG00000022896	Rrp7a	100	57.439	ENSPTIG00000020965	RRP7A	100	55.556	Panthera_tigris_altaica
ENSRNOG00000022896	Rrp7a	55	77.124	ENSPTRG00000033935	-	100	77.124	Pan_troglodytes
ENSRNOG00000022896	Rrp7a	100	78.571	ENSPANG00000032001	-	100	78.214	Papio_anubis
ENSRNOG00000022896	Rrp7a	100	84.643	ENSPANG00000025354	-	100	84.643	Papio_anubis
ENSRNOG00000022896	Rrp7a	93	48.134	ENSPKIG00000007209	rrp7a	81	48.507	Paramormyrops_kingsleyae
ENSRNOG00000022896	Rrp7a	95	67.041	ENSPSIG00000007988	RRP7A	100	67.041	Pelodiscus_sinensis
ENSRNOG00000022896	Rrp7a	91	39.922	ENSPMGG00000009485	rrp7a	91	39.147	Periophthalmus_magnuspinnatus
ENSRNOG00000022896	Rrp7a	100	90.357	ENSPEMG00000022265	Rrp7a	100	90.357	Peromyscus_maniculatus_bairdii
ENSRNOG00000022896	Rrp7a	100	48.582	ENSPMAG00000002823	rrp7a	100	48.582	Petromyzon_marinus
ENSRNOG00000022896	Rrp7a	95	72.075	ENSPCIG00000026195	RRP7A	95	72.075	Phascolarctos_cinereus
ENSRNOG00000022896	Rrp7a	93	45.556	ENSPFOG00000001042	rrp7a	94	45.693	Poecilia_formosa
ENSRNOG00000022896	Rrp7a	59	52.000	ENSPLAG00000009537	rrp7a	72	52.326	Poecilia_latipinna
ENSRNOG00000022896	Rrp7a	59	52.000	ENSPLAG00000010787	-	72	52.326	Poecilia_latipinna
ENSRNOG00000022896	Rrp7a	93	45.926	ENSPMEG00000018204	rrp7a	94	46.067	Poecilia_mexicana
ENSRNOG00000022896	Rrp7a	93	46.840	ENSPREG00000016492	rrp7a	94	46.992	Poecilia_reticulata
ENSRNOG00000022896	Rrp7a	100	83.571	ENSPPYG00000011897	RRP7A	100	83.571	Pongo_abelii
ENSRNOG00000022896	Rrp7a	94	87.879	ENSPCOG00000014018	RRP7A	100	85.000	Propithecus_coquereli
ENSRNOG00000022896	Rrp7a	90	82.143	ENSPVAG00000003330	RRP7A	100	82.143	Pteropus_vampyrus
ENSRNOG00000022896	Rrp7a	98	46.786	ENSPNYG00000020343	rrp7a	99	47.857	Pundamilia_nyererei
ENSRNOG00000022896	Rrp7a	93	45.660	ENSPNAG00000014376	rrp7a	94	45.660	Pygocentrus_nattereri
ENSRNOG00000022896	Rrp7a	100	74.113	ENSRBIG00000040358	RRP7A	100	73.050	Rhinopithecus_bieti
ENSRNOG00000022896	Rrp7a	100	82.562	ENSRROG00000036754	RRP7A	100	82.562	Rhinopithecus_roxellana
ENSRNOG00000022896	Rrp7a	100	82.143	ENSSBOG00000009234	RRP7A	100	82.143	Saimiri_boliviensis_boliviensis
ENSRNOG00000022896	Rrp7a	75	75.120	ENSSHAG00000005715	RRP7A	100	75.120	Sarcophilus_harrisii
ENSRNOG00000022896	Rrp7a	93	51.698	ENSSFOG00015012621	rrp7a	84	50.943	Scleropages_formosus
ENSRNOG00000022896	Rrp7a	93	48.120	ENSSMAG00000004593	rrp7a	94	48.120	Scophthalmus_maximus
ENSRNOG00000022896	Rrp7a	96	46.909	ENSSDUG00000016921	rrp7a	98	46.909	Seriola_dumerili
ENSRNOG00000022896	Rrp7a	96	46.545	ENSSLDG00000024758	rrp7a	98	46.545	Seriola_lalandi_dorsalis
ENSRNOG00000022896	Rrp7a	61	92.857	ENSSARG00000002133	-	67	92.857	Sorex_araneus
ENSRNOG00000022896	Rrp7a	84	63.136	ENSSPUG00000005373	RRP7A	94	63.136	Sphenodon_punctatus
ENSRNOG00000022896	Rrp7a	93	46.442	ENSSPAG00000016048	rrp7a	94	46.067	Stegastes_partitus
ENSRNOG00000022896	Rrp7a	100	81.429	ENSSSCG00000033983	RRP7A	100	81.429	Sus_scrofa
ENSRNOG00000022896	Rrp7a	91	64.591	ENSTGUG00000009647	RRP7A	100	64.591	Taeniopygia_guttata
ENSRNOG00000022896	Rrp7a	93	46.241	ENSTRUG00000024726	rrp7a	94	45.660	Takifugu_rubripes
ENSRNOG00000022896	Rrp7a	98	45.878	ENSTNIG00000010842	rrp7a	98	45.878	Tetraodon_nigroviridis
ENSRNOG00000022896	Rrp7a	100	84.286	ENSUAMG00000026180	RRP7A	100	84.286	Ursus_americanus
ENSRNOG00000022896	Rrp7a	100	82.143	ENSUMAG00000020394	RRP7A	100	82.143	Ursus_maritimus
ENSRNOG00000022896	Rrp7a	93	84.291	ENSVVUG00000002248	-	66	84.291	Vulpes_vulpes
ENSRNOG00000022896	Rrp7a	95	59.328	ENSXETG00000013414	rrp7a	97	59.328	Xenopus_tropicalis
ENSRNOG00000022896	Rrp7a	94	46.715	ENSXCOG00000015955	rrp7a	95	46.863	Xiphophorus_couchianus
ENSRNOG00000022896	Rrp7a	94	46.520	ENSXMAG00000006165	rrp7a	95	46.667	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0001825	blastocyst formation	-	IEA	Process
GO:0001825	blastocyst formation	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0032545	CURI complex	21873635.	IBA	Component
GO:0034456	UTP-C complex	21873635.	IBA	Component