EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000022939 (Gene tree)
Gene ID: 679890
Gene Symbol: Gpkow
Alias: LOC679890
Full Name: G patch domain and KOW motifs
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 14770 bases
Position: chrX:15636563-15651332
Accession: 1583600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000031422	KOW	PF00467.29	1.1e-10	1	1
ENSRNOP00000031422	G-patch	PF01585.23	0.00011	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000039000	-	4038	-	ENSRNOP00000031422	487 (aa)	-	G3V8Z3

Gene Model

Click here to download ENSRNOG00000022939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000022939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000022939	Gpkow	99	75.833	ENSG00000068394	GPKOW	96	75.796	Homo_sapiens
ENSRNOG00000022939	Gpkow	96	43.699	ENSAPOG00000004970	gpkow	94	43.558	Acanthochromis_polyacanthus
ENSRNOG00000022939	Gpkow	98	74.375	ENSAMEG00000012303	GPKOW	96	74.576	Ailuropoda_melanoleuca
ENSRNOG00000022939	Gpkow	96	43.585	ENSACIG00000010755	gpkow	94	43.943	Amphilophus_citrinellus
ENSRNOG00000022939	Gpkow	97	44.672	ENSAOCG00000022818	gpkow	93	44.467	Amphiprion_ocellaris
ENSRNOG00000022939	Gpkow	97	44.694	ENSAPEG00000021416	gpkow	95	44.490	Amphiprion_percula
ENSRNOG00000022939	Gpkow	95	43.145	ENSATEG00000023744	gpkow	94	43.548	Anabas_testudineus
ENSRNOG00000022939	Gpkow	98	47.942	ENSACAG00000016598	GPKOW	95	47.808	Anolis_carolinensis
ENSRNOG00000022939	Gpkow	86	69.834	ENSANAG00000036571	-	94	73.402	Aotus_nancymaae
ENSRNOG00000022939	Gpkow	99	67.292	ENSANAG00000033498	-	96	67.091	Aotus_nancymaae
ENSRNOG00000022939	Gpkow	99	74.167	ENSANAG00000030473	-	96	74.098	Aotus_nancymaae
ENSRNOG00000022939	Gpkow	59	41.137	ENSAMXG00000039266	gpkow	84	41.216	Astyanax_mexicanus
ENSRNOG00000022939	Gpkow	98	73.181	ENSBTAG00000002568	GPKOW	96	73.150	Bos_taurus
ENSRNOG00000022939	Gpkow	99	73.333	ENSCJAG00000002656	GPKOW	96	73.248	Callithrix_jacchus
ENSRNOG00000022939	Gpkow	100	73.006	ENSCAFG00000015794	GPKOW	96	73.885	Canis_familiaris
ENSRNOG00000022939	Gpkow	100	73.006	ENSCAFG00020020258	GPKOW	96	73.885	Canis_lupus_dingo
ENSRNOG00000022939	Gpkow	98	74.322	ENSCHIG00000013277	GPKOW	96	74.522	Capra_hircus
ENSRNOG00000022939	Gpkow	98	69.167	ENSTSYG00000029374	-	96	68.856	Carlito_syrichta
ENSRNOG00000022939	Gpkow	98	75.365	ENSTSYG00000033182	-	96	74.947	Carlito_syrichta
ENSRNOG00000022939	Gpkow	79	74.093	ENSCAPG00000011329	GPKOW	100	74.093	Cavia_aperea
ENSRNOG00000022939	Gpkow	99	72.634	ENSCPOG00000013270	GPKOW	96	73.461	Cavia_porcellus
ENSRNOG00000022939	Gpkow	98	66.180	ENSCCAG00000022161	-	96	66.170	Cebus_capucinus
ENSRNOG00000022939	Gpkow	99	72.292	ENSCCAG00000034660	-	96	72.187	Cebus_capucinus
ENSRNOG00000022939	Gpkow	99	76.458	ENSCATG00000041433	GPKOW	96	76.433	Cercocebus_atys
ENSRNOG00000022939	Gpkow	98	72.500	ENSCLAG00000002220	-	96	72.669	Chinchilla_lanigera
ENSRNOG00000022939	Gpkow	98	66.180	ENSCLAG00000007117	-	91	66.385	Chinchilla_lanigera
ENSRNOG00000022939	Gpkow	99	76.667	ENSCSAG00000012926	GPKOW	96	76.645	Chlorocebus_sabaeus
ENSRNOG00000022939	Gpkow	97	46.407	ENSCPBG00000016609	GPKOW	95	46.502	Chrysemys_picta_bellii
ENSRNOG00000022939	Gpkow	65	34.146	ENSCING00000020813	-	88	34.024	Ciona_intestinalis
ENSRNOG00000022939	Gpkow	99	75.625	ENSCANG00000037595	GPKOW	96	75.584	Colobus_angolensis_palliatus
ENSRNOG00000022939	Gpkow	100	83.811	ENSCGRG00001016210	Gpkow	97	84.534	Cricetulus_griseus_chok1gshd
ENSRNOG00000022939	Gpkow	100	83.811	ENSCGRG00000013835	Gpkow	97	84.534	Cricetulus_griseus_crigri
ENSRNOG00000022939	Gpkow	98	42.942	ENSCSEG00000020569	gpkow	96	43.750	Cynoglossus_semilaevis
ENSRNOG00000022939	Gpkow	97	42.505	ENSCVAG00000017066	gpkow	95	42.562	Cyprinodon_variegatus
ENSRNOG00000022939	Gpkow	97	45.102	ENSDARG00000029612	gpkow	94	44.969	Danio_rerio
ENSRNOG00000022939	Gpkow	98	74.739	ENSDNOG00000016647	GPKOW	99	73.733	Dasypus_novemcinctus
ENSRNOG00000022939	Gpkow	98	68.894	ENSDORG00000013663	Gpkow	96	69.002	Dipodomys_ordii
ENSRNOG00000022939	Gpkow	79	38.875	ENSEBUG00000001912	gpkow	92	38.575	Eptatretus_burgeri
ENSRNOG00000022939	Gpkow	98	70.146	ENSEASG00005019852	GPKOW	96	69.851	Equus_asinus_asinus
ENSRNOG00000022939	Gpkow	98	75.783	ENSECAG00000018251	GPKOW	96	75.584	Equus_caballus
ENSRNOG00000022939	Gpkow	98	62.004	ENSEEUG00000008839	GPKOW	96	61.996	Erinaceus_europaeus
ENSRNOG00000022939	Gpkow	95	42.515	ENSELUG00000022223	gpkow	94	42.715	Esox_lucius
ENSRNOG00000022939	Gpkow	98	73.278	ENSFCAG00000003818	GPKOW	96	73.248	Felis_catus
ENSRNOG00000022939	Gpkow	98	76.200	ENSFDAG00000001669	GPKOW	96	76.433	Fukomys_damarensis
ENSRNOG00000022939	Gpkow	97	43.061	ENSFHEG00000022349	gpkow	92	42.916	Fundulus_heteroclitus
ENSRNOG00000022939	Gpkow	97	41.079	ENSGMOG00000019661	gpkow	95	41.042	Gadus_morhua
ENSRNOG00000022939	Gpkow	96	42.073	ENSGACG00000012127	gpkow	95	42.276	Gasterosteus_aculeatus
ENSRNOG00000022939	Gpkow	86	44.575	ENSGAGG00000006302	GPKOW	100	44.575	Gopherus_agassizii
ENSRNOG00000022939	Gpkow	99	76.042	ENSGGOG00000013685	GPKOW	96	76.008	Gorilla_gorilla
ENSRNOG00000022939	Gpkow	96	44.242	ENSHBUG00000010655	gpkow	87	44.309	Haplochromis_burtoni
ENSRNOG00000022939	Gpkow	98	76.520	ENSHGLG00000002746	GPKOW	96	76.645	Heterocephalus_glaber_female
ENSRNOG00000022939	Gpkow	98	76.310	ENSHGLG00100014283	GPKOW	96	76.433	Heterocephalus_glaber_male
ENSRNOG00000022939	Gpkow	95	43.000	ENSIPUG00000008342	gpkow	94	43.400	Ictalurus_punctatus
ENSRNOG00000022939	Gpkow	99	76.667	ENSSTOG00000014593	GPKOW	96	76.645	Ictidomys_tridecemlineatus
ENSRNOG00000022939	Gpkow	98	79.959	ENSJJAG00000013397	Gpkow	96	79.665	Jaculus_jaculus
ENSRNOG00000022939	Gpkow	97	43.287	ENSKMAG00000006241	gpkow	95	43.347	Kryptolebias_marmoratus
ENSRNOG00000022939	Gpkow	99	42.471	ENSLBEG00000013238	gpkow	95	43.434	Labrus_bergylta
ENSRNOG00000022939	Gpkow	54	48.473	ENSLACG00000003399	gpkow	91	49.237	Latimeria_chalumnae
ENSRNOG00000022939	Gpkow	97	44.732	ENSLOCG00000014776	gpkow	94	45.473	Lepisosteus_oculatus
ENSRNOG00000022939	Gpkow	98	75.365	ENSLAFG00000005896	GPKOW	96	75.159	Loxodonta_africana
ENSRNOG00000022939	Gpkow	99	76.458	ENSMFAG00000035346	GPKOW	96	76.433	Macaca_fascicularis
ENSRNOG00000022939	Gpkow	99	76.250	ENSMMUG00000020557	GPKOW	93	76.221	Macaca_mulatta
ENSRNOG00000022939	Gpkow	99	76.250	ENSMNEG00000004803	GPKOW	96	76.221	Macaca_nemestrina
ENSRNOG00000022939	Gpkow	99	76.458	ENSMLEG00000033293	GPKOW	96	76.433	Mandrillus_leucophaeus
ENSRNOG00000022939	Gpkow	96	43.585	ENSMAMG00000024235	gpkow	94	43.902	Mastacembelus_armatus
ENSRNOG00000022939	Gpkow	96	43.952	ENSMZEG00005026357	gpkow	87	44.332	Maylandia_zebra
ENSRNOG00000022939	Gpkow	98	74.477	ENSMICG00000045083	GPKOW	96	74.310	Microcebus_murinus
ENSRNOG00000022939	Gpkow	100	87.500	ENSMOCG00000019251	Gpkow	100	87.500	Microtus_ochrogaster
ENSRNOG00000022939	Gpkow	98	49.184	ENSMODG00000023705	-	95	49.583	Monodelphis_domestica
ENSRNOG00000022939	Gpkow	91	49.664	ENSMODG00000011443	-	100	49.888	Monodelphis_domestica
ENSRNOG00000022939	Gpkow	96	41.463	ENSMALG00000015148	gpkow	94	41.429	Monopterus_albus
ENSRNOG00000022939	Gpkow	86	91.647	MGP_CAROLIEiJ_G0032893	Gpkow	92	91.647	Mus_caroli
ENSRNOG00000022939	Gpkow	100	92.008	ENSMUSG00000031148	Gpkow	100	92.008	Mus_musculus
ENSRNOG00000022939	Gpkow	100	91.189	MGP_PahariEiJ_G0031441	Gpkow	100	91.189	Mus_pahari
ENSRNOG00000022939	Gpkow	98	73.958	ENSMPUG00000013808	GPKOW	96	74.364	Mustela_putorius_furo
ENSRNOG00000022939	Gpkow	60	66.212	ENSMLUG00000009281	-	91	66.197	Myotis_lucifugus
ENSRNOG00000022939	Gpkow	98	78.763	ENSNGAG00000005382	Gpkow	96	79.245	Nannospalax_galili
ENSRNOG00000022939	Gpkow	96	43.408	ENSNBRG00000008941	gpkow	94	43.788	Neolamprologus_brichardi
ENSRNOG00000022939	Gpkow	99	74.375	ENSNLEG00000007998	GPKOW	96	74.310	Nomascus_leucogenys
ENSRNOG00000022939	Gpkow	52	54.118	ENSMEUG00000007467	-	79	54.118	Notamacropus_eugenii
ENSRNOG00000022939	Gpkow	79	63.265	ENSOPRG00000016412	-	76	64.095	Ochotona_princeps
ENSRNOG00000022939	Gpkow	96	43.927	ENSONIG00000016834	gpkow	87	44.309	Oreochromis_niloticus
ENSRNOG00000022939	Gpkow	98	66.460	ENSOCUG00000010422	GPKOW	96	66.526	Oryctolagus_cuniculus
ENSRNOG00000022939	Gpkow	97	42.656	ENSORLG00000014442	gpkow	95	43.058	Oryzias_latipes
ENSRNOG00000022939	Gpkow	97	42.656	ENSORLG00020012795	gpkow	95	43.058	Oryzias_latipes_hni
ENSRNOG00000022939	Gpkow	97	42.656	ENSORLG00015006852	gpkow	95	43.058	Oryzias_latipes_hsok
ENSRNOG00000022939	Gpkow	97	43.625	ENSOMEG00000003236	gpkow	95	43.145	Oryzias_melastigma
ENSRNOG00000022939	Gpkow	98	64.927	ENSOGAG00000003644	GPKOW	96	65.042	Otolemur_garnettii
ENSRNOG00000022939	Gpkow	98	74.113	ENSOARG00000010927	GPKOW	96	74.310	Ovis_aries
ENSRNOG00000022939	Gpkow	99	75.208	ENSPPAG00000040116	GPKOW	96	75.159	Pan_paniscus
ENSRNOG00000022939	Gpkow	98	73.278	ENSPPRG00000016972	GPKOW	96	73.248	Panthera_pardus
ENSRNOG00000022939	Gpkow	98	72.860	ENSPTIG00000008398	GPKOW	96	72.824	Panthera_tigris_altaica
ENSRNOG00000022939	Gpkow	99	75.417	ENSPTRG00000047603	GPKOW	96	75.372	Pan_troglodytes
ENSRNOG00000022939	Gpkow	99	76.458	ENSPANG00000013477	GPKOW	96	76.433	Papio_anubis
ENSRNOG00000022939	Gpkow	96	44.948	ENSPKIG00000008382	gpkow	93	44.720	Paramormyrops_kingsleyae
ENSRNOG00000022939	Gpkow	99	42.744	ENSPMGG00000010880	gpkow	94	42.857	Periophthalmus_magnuspinnatus
ENSRNOG00000022939	Gpkow	100	85.246	ENSPEMG00000009966	Gpkow	100	85.246	Peromyscus_maniculatus_bairdii
ENSRNOG00000022939	Gpkow	97	41.326	ENSPMAG00000003497	gpkow	95	41.304	Petromyzon_marinus
ENSRNOG00000022939	Gpkow	97	44.130	ENSPFOG00000003065	gpkow	92	44.353	Poecilia_formosa
ENSRNOG00000022939	Gpkow	97	44.130	ENSPLAG00000023097	gpkow	92	44.353	Poecilia_latipinna
ENSRNOG00000022939	Gpkow	97	44.332	ENSPMEG00000002762	gpkow	92	44.559	Poecilia_mexicana
ENSRNOG00000022939	Gpkow	64	45.231	ENSPREG00000002671	gpkow	99	45.231	Poecilia_reticulata
ENSRNOG00000022939	Gpkow	75	80.887	ENSPPYG00000020334	-	94	80.986	Pongo_abelii
ENSRNOG00000022939	Gpkow	98	74.739	ENSPCOG00000008505	GPKOW	96	74.735	Propithecus_coquereli
ENSRNOG00000022939	Gpkow	96	44.444	ENSPNYG00000014523	gpkow	94	44.807	Pundamilia_nyererei
ENSRNOG00000022939	Gpkow	95	44.488	ENSPNAG00000008360	gpkow	94	44.821	Pygocentrus_nattereri
ENSRNOG00000022939	Gpkow	95	74.730	ENSRBIG00000027885	GPKOW	99	74.730	Rhinopithecus_bieti
ENSRNOG00000022939	Gpkow	99	74.792	ENSRROG00000037604	GPKOW	96	74.735	Rhinopithecus_roxellana
ENSRNOG00000022939	Gpkow	98	64.718	ENSSBOG00000024861	-	94	64.681	Saimiri_boliviensis_boliviensis
ENSRNOG00000022939	Gpkow	99	73.750	ENSSBOG00000032042	-	96	73.885	Saimiri_boliviensis_boliviensis
ENSRNOG00000022939	Gpkow	55	49.270	ENSSHAG00000004719	-	100	49.270	Sarcophilus_harrisii
ENSRNOG00000022939	Gpkow	96	45.010	ENSSFOG00015009901	gpkow	93	45.082	Scleropages_formosus
ENSRNOG00000022939	Gpkow	95	43.852	ENSSMAG00000013323	gpkow	94	43.852	Scophthalmus_maximus
ENSRNOG00000022939	Gpkow	97	44.000	ENSSDUG00000023134	gpkow	95	44.467	Seriola_dumerili
ENSRNOG00000022939	Gpkow	97	43.687	ENSSLDG00000024756	gpkow	95	44.153	Seriola_lalandi_dorsalis
ENSRNOG00000022939	Gpkow	88	69.195	ENSSARG00000003351	GPKOW	100	69.195	Sorex_araneus
ENSRNOG00000022939	Gpkow	96	44.928	ENSSPAG00000015503	gpkow	97	44.906	Stegastes_partitus
ENSRNOG00000022939	Gpkow	98	75.676	ENSSSCG00000012291	GPKOW	96	75.687	Sus_scrofa
ENSRNOG00000022939	Gpkow	96	42.008	ENSTRUG00000000616	gpkow	94	41.975	Takifugu_rubripes
ENSRNOG00000022939	Gpkow	98	42.181	ENSTNIG00000012502	gpkow	95	42.495	Tetraodon_nigroviridis
ENSRNOG00000022939	Gpkow	79	83.333	ENSTBEG00000004087	GPKOW	76	82.500	Tupaia_belangeri
ENSRNOG00000022939	Gpkow	98	74.059	ENSTTRG00000008579	GPKOW	96	74.043	Tursiops_truncatus
ENSRNOG00000022939	Gpkow	89	75.231	ENSUAMG00000026502	GPKOW	96	75.236	Ursus_americanus
ENSRNOG00000022939	Gpkow	84	75.430	ENSUMAG00000007072	GPKOW	80	75.430	Ursus_maritimus
ENSRNOG00000022939	Gpkow	100	73.211	ENSVVUG00000017815	GPKOW	96	74.098	Vulpes_vulpes
ENSRNOG00000022939	Gpkow	97	45.248	ENSXETG00000007727	gpkow	98	45.094	Xenopus_tropicalis
ENSRNOG00000022939	Gpkow	98	44.489	ENSXCOG00000014306	gpkow	94	44.672	Xiphophorus_couchianus
ENSRNOG00000022939	Gpkow	98	44.200	ENSXMAG00000018216	gpkow	92	44.581	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005681	spliceosomal complex	-	ISO	Component