EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000023356 (Gene tree)
Gene ID: 308306
Gene Symbol: Eif5b
Alias: LOC308306|eIF-5B
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 31706 bases
Position: chr9:44681494-44713199
Accession: 735017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000036844	IF-2	PF11987.8	1.9e-19	1	1
ENSRNOP00000036844	GTP_EFTU	PF00009.27	3.5e-34	1	1
ENSRNOP00000036844	MMR_HSR1	PF01926.23	5e-07	1	1
ENSRNOP00000036844	GTP_EFTU_D2	PF03144.25	1.9e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000035785	-	3618	-	ENSRNOP00000036844	1205 (aa)	-	A0A0H2UHV4

Gene Model

Click here to download ENSRNOG00000023356's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000023356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000023356	Eif5b	100	99.751	ENSRNOG00000046621	AABR07043748.1	99	99.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000023356	Eif5b	100	88.357	ENSG00000158417	EIF5B	99	88.522	Homo_sapiens
ENSRNOG00000023356	Eif5b	100	88.687	ENSAMEG00000013269	EIF5B	99	88.935	Ailuropoda_melanoleuca
ENSRNOG00000023356	Eif5b	99	79.020	ENSAPLG00000015401	EIF5B	100	80.426	Anas_platyrhynchos
ENSRNOG00000023356	Eif5b	100	89.174	ENSANAG00000017300	EIF5B	99	89.421	Aotus_nancymaae
ENSRNOG00000023356	Eif5b	99	87.987	ENSBTAG00000034255	EIF5B	99	88.318	Bos_taurus
ENSRNOG00000023356	Eif5b	100	88.852	ENSCAFG00000002278	EIF5B	99	89.100	Canis_familiaris
ENSRNOG00000023356	Eif5b	99	88.358	ENSCAFG00020024623	EIF5B	99	88.646	Canis_lupus_dingo
ENSRNOG00000023356	Eif5b	100	87.851	ENSCHIG00000027106	EIF5B	99	88.347	Capra_hircus
ENSRNOG00000023356	Eif5b	100	88.916	ENSTSYG00000011850	EIF5B	100	89.165	Carlito_syrichta
ENSRNOG00000023356	Eif5b	100	88.678	ENSCCAG00000027156	EIF5B	99	88.926	Cebus_capucinus
ENSRNOG00000023356	Eif5b	100	88.861	ENSCATG00000038292	EIF5B	99	88.861	Cercocebus_atys
ENSRNOG00000023356	Eif5b	100	87.934	ENSCLAG00000007674	EIF5B	99	87.769	Chinchilla_lanigera
ENSRNOG00000023356	Eif5b	100	88.706	ENSCSAG00000017209	EIF5B	99	88.871	Chlorocebus_sabaeus
ENSRNOG00000023356	Eif5b	100	81.311	ENSCPBG00000005318	EIF5B	99	80.804	Chrysemys_picta_bellii
ENSRNOG00000023356	Eif5b	100	88.449	ENSCANG00000042984	EIF5B	99	88.036	Colobus_angolensis_palliatus
ENSRNOG00000023356	Eif5b	100	90.894	ENSCGRG00001010937	Eif5b	99	91.142	Cricetulus_griseus_chok1gshd
ENSRNOG00000023356	Eif5b	99	90.962	ENSCGRG00000003140	Eif5b	100	91.211	Cricetulus_griseus_crigri
ENSRNOG00000023356	Eif5b	95	88.045	ENSDNOG00000005016	EIF5B	99	88.307	Dasypus_novemcinctus
ENSRNOG00000023356	Eif5b	100	84.437	ENSETEG00000001467	EIF5B	99	84.189	Echinops_telfairi
ENSRNOG00000023356	Eif5b	98	88.814	ENSEASG00005018269	EIF5B	99	89.504	Equus_asinus_asinus
ENSRNOG00000023356	Eif5b	98	89.571	ENSECAG00000000102	EIF5B	99	89.752	Equus_caballus
ENSRNOG00000023356	Eif5b	100	87.993	ENSFCAG00000009782	EIF5B	100	88.240	Felis_catus
ENSRNOG00000023356	Eif5b	100	88.503	ENSFDAG00000008737	EIF5B	99	88.751	Fukomys_damarensis
ENSRNOG00000023356	Eif5b	100	80.312	ENSGALG00000016764	EIF5B	99	80.476	Gallus_gallus
ENSRNOG00000023356	Eif5b	100	88.274	ENSGGOG00000001721	EIF5B	99	88.439	Gorilla_gorilla
ENSRNOG00000023356	Eif5b	100	88.981	ENSHGLG00000016367	EIF5B	99	89.147	Heterocephalus_glaber_female
ENSRNOG00000023356	Eif5b	100	88.898	ENSHGLG00100016185	EIF5B	99	89.064	Heterocephalus_glaber_male
ENSRNOG00000023356	Eif5b	100	88.926	ENSSTOG00000014283	EIF5B	99	89.091	Ictidomys_tridecemlineatus
ENSRNOG00000023356	Eif5b	73	76.406	ENSLOCG00000001405	EIF5B	51	86.817	Lepisosteus_oculatus
ENSRNOG00000023356	Eif5b	100	88.099	ENSLAFG00000006209	EIF5B	99	87.603	Loxodonta_africana
ENSRNOG00000023356	Eif5b	100	88.944	ENSMFAG00000038108	EIF5B	99	88.944	Macaca_fascicularis
ENSRNOG00000023356	Eif5b	100	88.861	ENSMMUG00000018946	EIF5B	99	88.861	Macaca_mulatta
ENSRNOG00000023356	Eif5b	100	88.944	ENSMNEG00000040038	EIF5B	99	88.944	Macaca_nemestrina
ENSRNOG00000023356	Eif5b	100	88.779	ENSMLEG00000031596	EIF5B	100	88.779	Mandrillus_leucophaeus
ENSRNOG00000023356	Eif5b	99	80.769	ENSMGAG00000014793	EIF5B	99	80.851	Meleagris_gallopavo
ENSRNOG00000023356	Eif5b	100	89.587	ENSMICG00000015960	EIF5B	99	89.909	Microcebus_murinus
ENSRNOG00000023356	Eif5b	100	96.680	MGP_CAROLIEiJ_G0014061	Eif5b	99	96.680	Mus_caroli
ENSRNOG00000023356	Eif5b	100	97.012	ENSMUSG00000026083	Eif5b	99	97.012	Mus_musculus
ENSRNOG00000023356	Eif5b	100	96.598	MGP_PahariEiJ_G0027308	Eif5b	99	96.598	Mus_pahari
ENSRNOG00000023356	Eif5b	100	96.929	MGP_SPRETEiJ_G0014865	Eif5b	99	96.929	Mus_spretus
ENSRNOG00000023356	Eif5b	100	88.926	ENSMPUG00000012068	EIF5B	99	89.256	Mustela_putorius_furo
ENSRNOG00000023356	Eif5b	100	88.274	ENSMLUG00000008119	EIF5B	100	88.017	Myotis_lucifugus
ENSRNOG00000023356	Eif5b	100	88.357	ENSNLEG00000014172	EIF5B	99	88.522	Nomascus_leucogenys
ENSRNOG00000023356	Eif5b	94	85.777	ENSOPRG00000007359	EIF5B	93	85.777	Ochotona_princeps
ENSRNOG00000023356	Eif5b	100	89.513	ENSOGAG00000013238	EIF5B	99	89.761	Otolemur_garnettii
ENSRNOG00000023356	Eif5b	100	88.182	ENSOARG00000013400	EIF5B	99	88.678	Ovis_aries
ENSRNOG00000023356	Eif5b	100	86.386	ENSPPAG00000029857	EIF5B	100	86.304	Pan_paniscus
ENSRNOG00000023356	Eif5b	100	88.760	ENSPPRG00000010820	EIF5B	99	89.008	Panthera_pardus
ENSRNOG00000023356	Eif5b	100	86.606	ENSPTIG00000021215	EIF5B	99	86.853	Panthera_tigris_altaica
ENSRNOG00000023356	Eif5b	100	88.439	ENSPTRG00000012279	EIF5B	99	88.604	Pan_troglodytes
ENSRNOG00000023356	Eif5b	100	89.191	ENSPANG00000021269	EIF5B	99	89.274	Papio_anubis
ENSRNOG00000023356	Eif5b	99	82.852	ENSPCIG00000011603	EIF5B	99	82.921	Phascolarctos_cinereus
ENSRNOG00000023356	Eif5b	83	85.262	ENSPPYG00000012094	EIF5B	99	85.460	Pongo_abelii
ENSRNOG00000023356	Eif5b	99	86.589	ENSRBIG00000028180	EIF5B	99	86.010	Rhinopithecus_bieti
ENSRNOG00000023356	Eif5b	100	88.531	ENSRROG00000038801	EIF5B	99	88.586	Rhinopithecus_roxellana
ENSRNOG00000023356	Eif5b	100	88.512	ENSSBOG00000033578	EIF5B	99	88.760	Saimiri_boliviensis_boliviensis
ENSRNOG00000023356	Eif5b	100	85.091	ENSSHAG00000010146	EIF5B	99	84.926	Sarcophilus_harrisii
ENSRNOG00000023356	Eif5b	99	88.201	ENSSARG00000002096	EIF5B	100	88.036	Sorex_araneus
ENSRNOG00000023356	Eif5b	99	78.830	ENSSPUG00000009445	EIF5B	99	78.501	Sphenodon_punctatus
ENSRNOG00000023356	Eif5b	100	88.347	ENSSSCG00000008180	EIF5B	99	88.430	Sus_scrofa
ENSRNOG00000023356	Eif5b	100	78.706	ENSTGUG00000010099	EIF5B	99	79.115	Taeniopygia_guttata
ENSRNOG00000023356	Eif5b	100	85.879	ENSTTRG00000010374	EIF5B	99	86.127	Tursiops_truncatus
ENSRNOG00000023356	Eif5b	100	88.843	ENSUMAG00000008519	EIF5B	98	97.550	Ursus_maritimus
ENSRNOG00000023356	Eif5b	89	86.406	ENSVPAG00000007725	EIF5B	100	86.965	Vicugna_pacos
ENSRNOG00000023356	Eif5b	100	88.843	ENSVVUG00000028702	EIF5B	99	89.091	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005515	protein binding	8667030.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006413	translational initiation	-	IEA	Process
GO:0006446	regulation of translational initiation	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function