EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000023360 (Gene tree)
Gene ID: 317385
Gene Symbol: Fus
Alias: LOC317385
Full Name: FUS RNA binding protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 13869 bases
Position: chr1:199412834-199426702
Accession: 1308864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000033029	zf-RanBP	PF00641.18	4.7e-12	1	1
ENSRNOP00000033029	RRM_1	PF00076.22	5.5e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000031891	-	1814	XM_006230290	ENSRNOP00000033029	518 (aa)	XP_006230352	Q5PQK2

Gene Model

Click here to download ENSRNOG00000023360's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05202	Transcriptional misregulation in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000023360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000023360	Fus	51	98.113	ENSG00000089280	FUS	70	90.909	Homo_sapiens
ENSRNOG00000023360	Fus	99	96.318	ENSAMEG00000007181	FUS	100	96.318	Ailuropoda_melanoleuca
ENSRNOG00000023360	Fus	100	95.265	ENSANAG00000021591	-	100	95.265	Aotus_nancymaae
ENSRNOG00000023360	Fus	100	95.183	ENSBTAG00000005757	FUS	100	95.183	Bos_taurus
ENSRNOG00000023360	Fus	99	95.048	ENSCJAG00000003169	FUS	100	95.048	Callithrix_jacchus
ENSRNOG00000023360	Fus	100	97.115	ENSCAFG00000016862	FUS	100	97.115	Canis_familiaris
ENSRNOG00000023360	Fus	100	96.146	ENSCAFG00020018210	FUS	100	96.146	Canis_lupus_dingo
ENSRNOG00000023360	Fus	100	96.339	ENSCHIG00000004508	FUS	100	96.339	Capra_hircus
ENSRNOG00000023360	Fus	100	96.146	ENSTSYG00000011757	FUS	100	96.146	Carlito_syrichta
ENSRNOG00000023360	Fus	100	92.678	ENSCPOG00000038302	FUS	100	92.678	Cavia_porcellus
ENSRNOG00000023360	Fus	99	95.446	ENSCCAG00000019778	FUS	100	95.446	Cebus_capucinus
ENSRNOG00000023360	Fus	51	98.113	ENSCATG00000034413	FUS	50	93.585	Cercocebus_atys
ENSRNOG00000023360	Fus	100	98.266	ENSCLAG00000010457	FUS	100	98.266	Chinchilla_lanigera
ENSRNOG00000023360	Fus	51	98.113	ENSCSAG00000005711	FUS	50	93.585	Chlorocebus_sabaeus
ENSRNOG00000023360	Fus	62	93.750	ENSCHOG00000010780	FUS	50	96.067	Choloepus_hoffmanni
ENSRNOG00000023360	Fus	100	99.614	ENSCGRG00001016216	Fus	100	99.614	Cricetulus_griseus_chok1gshd
ENSRNOG00000023360	Fus	100	99.228	ENSCGRG00000012106	Fus	100	99.228	Cricetulus_griseus_crigri
ENSRNOG00000023360	Fus	100	96.724	ENSDNOG00000017091	FUS	100	96.724	Dasypus_novemcinctus
ENSRNOG00000023360	Fus	100	98.459	ENSDORG00000014218	Fus	100	98.459	Dipodomys_ordii
ENSRNOG00000023360	Fus	100	91.538	ENSEASG00005011180	-	51	87.218	Equus_asinus_asinus
ENSRNOG00000023360	Fus	92	99.270	ENSEEUG00000004934	FUS	91	99.270	Erinaceus_europaeus
ENSRNOG00000023360	Fus	100	97.692	ENSFCAG00000027928	FUS	100	97.692	Felis_catus
ENSRNOG00000023360	Fus	100	97.688	ENSFDAG00000007552	FUS	100	97.688	Fukomys_damarensis
ENSRNOG00000023360	Fus	51	97.736	ENSGGOG00000003707	FUS	51	93.208	Gorilla_gorilla
ENSRNOG00000023360	Fus	100	96.339	ENSHGLG00000017008	-	100	96.339	Heterocephalus_glaber_female
ENSRNOG00000023360	Fus	52	98.148	ENSHGLG00100006254	-	96	95.062	Heterocephalus_glaber_male
ENSRNOG00000023360	Fus	97	91.107	ENSSTOG00000005943	FUS	100	91.107	Ictidomys_tridecemlineatus
ENSRNOG00000023360	Fus	100	98.073	ENSJJAG00000011802	Fus	100	98.073	Jaculus_jaculus
ENSRNOG00000023360	Fus	100	82.950	ENSLAFG00000001643	FUS	96	90.741	Loxodonta_africana
ENSRNOG00000023360	Fus	80	97.701	ENSMMUG00000019637	FUS	55	93.436	Macaca_mulatta
ENSRNOG00000023360	Fus	98	77.087	ENSMNEG00000027646	FUS	99	77.087	Macaca_nemestrina
ENSRNOG00000023360	Fus	51	97.744	ENSMLEG00000038040	FUS	51	93.233	Mandrillus_leucophaeus
ENSRNOG00000023360	Fus	100	99.421	ENSMAUG00000009599	Fus	100	99.421	Mesocricetus_auratus
ENSRNOG00000023360	Fus	100	96.532	ENSMICG00000033962	FUS	100	96.532	Microcebus_murinus
ENSRNOG00000023360	Fus	100	78.378	ENSMOCG00000019180	-	75	96.537	Microtus_ochrogaster
ENSRNOG00000023360	Fus	100	99.614	ENSMOCG00000006871	-	100	99.614	Microtus_ochrogaster
ENSRNOG00000023360	Fus	100	91.098	ENSMODG00000001889	FUS	50	92.453	Monodelphis_domestica
ENSRNOG00000023360	Fus	100	99.807	MGP_CAROLIEiJ_G0030533	Fus	100	99.807	Mus_caroli
ENSRNOG00000023360	Fus	100	99.614	ENSMUSG00000030795	Fus	100	99.614	Mus_musculus
ENSRNOG00000023360	Fus	100	99.807	MGP_PahariEiJ_G0013740	Fus	100	99.807	Mus_pahari
ENSRNOG00000023360	Fus	100	99.807	MGP_SPRETEiJ_G0031647	Fus	100	99.807	Mus_spretus
ENSRNOG00000023360	Fus	100	96.731	ENSMPUG00000011426	-	98	96.731	Mustela_putorius_furo
ENSRNOG00000023360	Fus	99	95.728	ENSMLUG00000004806	-	100	95.728	Myotis_lucifugus
ENSRNOG00000023360	Fus	100	97.297	ENSNGAG00000023361	-	100	97.297	Nannospalax_galili
ENSRNOG00000023360	Fus	99	81.584	ENSNLEG00000016218	FUS	51	93.233	Nomascus_leucogenys
ENSRNOG00000023360	Fus	57	97.340	ENSMEUG00000000968	FUS	57	97.340	Notamacropus_eugenii
ENSRNOG00000023360	Fus	100	89.808	ENSODEG00000007263	-	100	89.808	Octodon_degus
ENSRNOG00000023360	Fus	100	98.073	ENSODEG00000015325	-	100	98.073	Octodon_degus
ENSRNOG00000023360	Fus	51	90.152	ENSOANG00000005606	FUS	51	90.152	Ornithorhynchus_anatinus
ENSRNOG00000023360	Fus	67	51.752	ENSORLG00020014824	-	54	56.015	Oryzias_latipes_hni
ENSRNOG00000023360	Fus	67	51.213	ENSORLG00015022673	-	54	55.639	Oryzias_latipes_hsok
ENSRNOG00000023360	Fus	100	91.715	ENSPPAG00000029090	FUS	100	91.715	Pan_paniscus
ENSRNOG00000023360	Fus	100	97.692	ENSPPRG00000004170	FUS	100	97.692	Panthera_pardus
ENSRNOG00000023360	Fus	100	96.923	ENSPTIG00000012151	FUS	100	97.244	Panthera_tigris_altaica
ENSRNOG00000023360	Fus	51	97.744	ENSPTRG00000008038	FUS	51	93.233	Pan_troglodytes
ENSRNOG00000023360	Fus	51	98.113	ENSPANG00000021275	FUS	50	93.585	Papio_anubis
ENSRNOG00000023360	Fus	100	99.807	ENSPEMG00000023119	Fus	100	99.807	Peromyscus_maniculatus_bairdii
ENSRNOG00000023360	Fus	99	79.183	ENSPCOG00000022295	FUS	60	93.208	Propithecus_coquereli
ENSRNOG00000023360	Fus	99	90.944	ENSPVAG00000003097	FUS	100	85.164	Pteropus_vampyrus
ENSRNOG00000023360	Fus	51	97.744	ENSRBIG00000042196	FUS	51	93.233	Rhinopithecus_bieti
ENSRNOG00000023360	Fus	100	91.493	ENSSBOG00000034540	FUS	50	93.585	Saimiri_boliviensis_boliviensis
ENSRNOG00000023360	Fus	82	93.252	ENSSHAG00000011874	FUS	86	87.547	Sarcophilus_harrisii
ENSRNOG00000023360	Fus	79	49.645	ENSSPUG00000007180	-	53	62.312	Sphenodon_punctatus
ENSRNOG00000023360	Fus	100	96.176	ENSSSCG00000030798	FUS	100	96.176	Sus_scrofa
ENSRNOG00000023360	Fus	62	96.988	ENSTTRG00000015559	FUS	53	97.000	Tursiops_truncatus
ENSRNOG00000023360	Fus	100	95.761	ENSUAMG00000008533	FUS	100	95.761	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003713	transcription coactivator activity	-	IEA	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	15843054.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005844	polysome	15843054.	IDA	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0008380	RNA splicing	-	ISO	Process
GO:0030331	estrogen receptor binding	9440806.	IDA	Function
GO:0030425	dendrite	15843054.	IDA	Component
GO:0031489	myosin V binding	19103256.	IPI	Function
GO:0035255	ionotropic glutamate receptor binding	19103256.	IPI	Function
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043025	neuronal cell body	15843054.	IDA	Component
GO:0043197	dendritic spine	15843054.	IDA	Component
GO:0043204	perikaryon	15843054.	IDA	Component
GO:0043484	regulation of RNA splicing	-	IEA	Process
GO:0043484	regulation of RNA splicing	-	ISO	Process
GO:0044327	dendritic spine head	15843054.	IDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0046965	retinoid X receptor binding	9440806.	IPI	Function
GO:0046966	thyroid hormone receptor binding	9440806.	IDA	Function
GO:0048471	perinuclear region of cytoplasm	15843054.	IDA	Component
GO:0051260	protein homooligomerization	-	IEA	Process
GO:0051260	protein homooligomerization	-	ISO	Process
GO:0071277	cellular response to calcium ion	19103256.	IDA	Process
GO:1903508	positive regulation of nucleic acid-templated transcription	-	IEA	Process
GO:1905168	positive regulation of double-strand break repair via homologous recombination	-	IEA	Process
GO:1905168	positive regulation of double-strand break repair via homologous recombination	-	ISO	Process