EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000023601 (Gene tree)
Gene ID
432358
Gene Symbol
Elavl4
Alias
HuD|LOC298359|RGD1561943|r-HuD
Full Name
ELAV like RNA binding protein 4
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
84467 bases
Position
chr5:130001372-130085838
Accession
1560027
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000037614RRM_5PF13893.62.2e-1312
ENSRNOP00000037614RRM_5PF13893.62.2e-1322
ENSRNOP00000037614RRM_1PF00076.221.7e-6513
ENSRNOP00000037614RRM_1PF00076.221.7e-6523
ENSRNOP00000037614RRM_1PF00076.221.7e-6533
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000035252-3954XM_006238591ENSRNOP00000037614385 (aa)XP_006238653A0A140TAF2
Gene Model
Click here to download ENSRNOG00000023601's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000023601's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000023601Elavl46635.533ENSRNOG00000008482Rbms15534.025
ENSRNOG00000023601Elavl49878.628ENSRNOG00000013752Elavl39978.892
ENSRNOG00000023601Elavl49985.156ENSRNOG00000006853Elavl210083.155
ENSRNOG00000023601Elavl46635.821ENSRNOG00000009156Tra2a5937.097
ENSRNOG00000023601Elavl48930.864ENSRNOG00000028592AABR07035074.15730.864
ENSRNOG00000023601Elavl48833.735ENSRNOG00000012750Pabpc1l6233.735
ENSRNOG00000023601Elavl46835.000ENSRNOG00000003076Rbms25335.000
ENSRNOG00000023601Elavl48636.709ENSRNOG00000029749Pabpc4l9636.709
ENSRNOG00000023601Elavl48735.897ENSRNOG00000020271Tial17335.897
ENSRNOG00000023601Elavl48734.940ENSRNOG00000014527Pabpc25934.940
ENSRNOG00000023601Elavl46638.272ENSRNOG00000023661Celf25338.272
ENSRNOG00000023601Elavl48736.145ENSRNOG00000008639Pabpc17036.145
ENSRNOG00000023601Elavl46135.897ENSRNOG00000016813Tia16935.897
ENSRNOG00000023601Elavl47330.952ENSRNOG00000015642Pabpc45830.952
ENSRNOG00000023601Elavl46538.889ENSRNOG00000015999Cirbp5338.889
ENSRNOG00000023601Elavl46740.741ENSRNOG00000020875Celf35440.741
ENSRNOG00000023601Elavl48731.818ENSRNOG00000017367Pabpc66031.818
ENSRNOG00000023601Elavl47240.741ENSRNOG00000010379Celf16140.741
ENSRNOG00000023601Elavl49067.826ENSRNOG00000001069Elavl19867.826
ENSRNOG00000023601Elavl47840.741ENSRNOG00000052224Celf66540.741
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000023601Elavl410099.740ENSG00000162374ELAVL410099.740Homo_sapiens
ENSRNOG00000023601Elavl49890.551ENSAPOG00000020329elavl49690.501Acanthochromis_polyacanthus
ENSRNOG00000023601Elavl4100100.000ENSAMEG00000017455ELAVL4100100.000Ailuropoda_melanoleuca
ENSRNOG00000023601Elavl49790.667ENSACIG00000008793elavl410090.667Amphilophus_citrinellus
ENSRNOG00000023601Elavl48083.838ENSAOCG00000022907elavl48983.838Amphiprion_ocellaris
ENSRNOG00000023601Elavl49890.501ENSAPEG00000022826elavl49490.501Amphiprion_percula
ENSRNOG00000023601Elavl49990.052ENSATEG00000006136elavl49990.052Anabas_testudineus
ENSRNOG00000023601Elavl410095.325ENSACAG00000004527ELAVL410095.325Anolis_carolinensis
ENSRNOG00000023601Elavl49998.187ENSANAG00000030598ELAVL49998.187Aotus_nancymaae
ENSRNOG00000023601Elavl49889.844ENSACLG00000002786elavl49689.791Astatotilapia_calliptera
ENSRNOG00000023601Elavl49891.821ENSAMXG00000000687elavl49691.777Astyanax_mexicanus
ENSRNOG00000023601Elavl410096.364ENSBTAG00000021046ELAVL410096.364Bos_taurus
ENSRNOG00000023601Elavl48962.385WBGene00001368exc-77062.385Caenorhabditis_elegans
ENSRNOG00000023601Elavl410099.481ENSCJAG00000013725ELAVL410099.481Callithrix_jacchus
ENSRNOG00000023601Elavl49995.789ENSCAFG00000003927ELAVL410095.789Canis_familiaris
ENSRNOG00000023601Elavl410097.403ENSCAFG00020013581ELAVL410097.403Canis_lupus_dingo
ENSRNOG00000023601Elavl49999.478ENSCHIG00000002038ELAVL49999.478Capra_hircus
ENSRNOG00000023601Elavl48799.245ENSTSYG00000004130ELAVL49493.939Carlito_syrichta
ENSRNOG00000023601Elavl49768.901ENSCAPG00000011942-9968.901Cavia_aperea
ENSRNOG00000023601Elavl463100.000ENSCAPG00000005993ELAVL480100.000Cavia_aperea
ENSRNOG00000023601Elavl4100100.000ENSCPOG00000002044-100100.000Cavia_porcellus
ENSRNOG00000023601Elavl49767.819ENSCPOG00000022816-9967.819Cavia_porcellus
ENSRNOG00000023601Elavl410099.481ENSCCAG00000024797ELAVL410099.481Cebus_capucinus
ENSRNOG00000023601Elavl49999.211ENSCATG00000029867ELAVL410099.732Cercocebus_atys
ENSRNOG00000023601Elavl49998.698ENSCLAG00000005476ELAVL49998.698Chinchilla_lanigera
ENSRNOG00000023601Elavl49995.526ENSCSAG00000001257ELAVL410095.526Chlorocebus_sabaeus
ENSRNOG00000023601Elavl410098.701ENSCHOG00000002464ELAVL410098.701Choloepus_hoffmanni
ENSRNOG00000023601Elavl410095.325ENSCPBG00000010017ELAVL410095.325Chrysemys_picta_bellii
ENSRNOG00000023601Elavl49143.548ENSCING00000009052-10043.548Ciona_intestinalis
ENSRNOG00000023601Elavl49999.211ENSCANG00000043683ELAVL410099.211Colobus_angolensis_palliatus
ENSRNOG00000023601Elavl4100100.000ENSCGRG00001020348Elavl4100100.000Cricetulus_griseus_chok1gshd
ENSRNOG00000023601Elavl4100100.000ENSCGRG00000009162Elavl4100100.000Cricetulus_griseus_crigri
ENSRNOG00000023601Elavl49890.551ENSCSEG00000020141elavl49690.501Cynoglossus_semilaevis
ENSRNOG00000023601Elavl49889.817ENSCVAG00000019080elavl410086.667Cyprinodon_variegatus
ENSRNOG00000023601Elavl49892.348ENSDARG00000045639elavl49191.623Danio_rerio
ENSRNOG00000023601Elavl410096.364ENSDNOG00000033502ELAVL410096.364Dasypus_novemcinctus
ENSRNOG00000023601Elavl4100100.000ENSDORG00000012729Elavl4100100.000Dipodomys_ordii
ENSRNOG00000023601Elavl49893.103ENSETEG00000013779ELAVL410093.103Echinops_telfairi
ENSRNOG00000023601Elavl410096.104ENSEASG00005010728ELAVL410096.104Equus_asinus_asinus
ENSRNOG00000023601Elavl410096.104ENSECAG00000022284ELAVL410096.104Equus_caballus
ENSRNOG00000023601Elavl410099.740ENSEEUG00000008766ELAVL410099.740Erinaceus_europaeus
ENSRNOG00000023601Elavl49891.623ENSELUG00000008025elavl49191.623Esox_lucius
ENSRNOG00000023601Elavl4100100.000ENSFCAG00000010438ELAVL4100100.000Felis_catus
ENSRNOG00000023601Elavl410095.325ENSFALG00000005331ELAVL410095.325Ficedula_albicollis
ENSRNOG00000023601Elavl49899.469ENSFDAG00000014507ELAVL410099.469Fukomys_damarensis
ENSRNOG00000023601Elavl49891.029ENSFHEG00000004530elavl49291.029Fundulus_heteroclitus
ENSRNOG00000023601Elavl49792.493ENSGMOG00000006515elavl410092.493Gadus_morhua
ENSRNOG00000023601Elavl410095.325ENSGALG00000010533ELAVL410095.325Gallus_gallus
ENSRNOG00000023601Elavl48689.157ENSGAFG00000015956elavl48489.157Gambusia_affinis
ENSRNOG00000023601Elavl49790.133ENSGACG00000011152elavl410090.133Gasterosteus_aculeatus
ENSRNOG00000023601Elavl49994.531ENSGAGG00000018269ELAVL49994.531Gopherus_agassizii
ENSRNOG00000023601Elavl49999.211ENSGGOG00000000634ELAVL410099.732Gorilla_gorilla
ENSRNOG00000023601Elavl49890.551ENSHBUG00000009691elavl49690.501Haplochromis_burtoni
ENSRNOG00000023601Elavl49899.469ENSHGLG00000000485ELAVL410099.732Heterocephalus_glaber_female
ENSRNOG00000023601Elavl49899.469ENSHGLG00100002567ELAVL410099.732Heterocephalus_glaber_male
ENSRNOG00000023601Elavl49790.933ENSHCOG00000002490elavl410090.933Hippocampus_comes
ENSRNOG00000023601Elavl49892.084ENSIPUG00000001381elavl49292.084Ictalurus_punctatus
ENSRNOG00000023601Elavl49998.956ENSSTOG00000027271ELAVL49998.956Ictidomys_tridecemlineatus
ENSRNOG00000023601Elavl49999.217ENSJJAG00000023099Elavl410099.732Jaculus_jaculus
ENSRNOG00000023601Elavl49889.844ENSKMAG00000022289elavl49389.844Kryptolebias_marmoratus
ENSRNOG00000023601Elavl49890.365ENSLBEG00000007096elavl49386.534Labrus_bergylta
ENSRNOG00000023601Elavl49993.947ENSLACG00000008316ELAVL49993.947Latimeria_chalumnae
ENSRNOG00000023601Elavl49892.612ENSLOCG00000009363elavl49092.612Lepisosteus_oculatus
ENSRNOG00000023601Elavl4100100.000ENSLAFG00000001087ELAVL4100100.000Loxodonta_africana
ENSRNOG00000023601Elavl410099.740ENSMFAG00000039866ELAVL410099.740Macaca_fascicularis
ENSRNOG00000023601Elavl49998.446ENSMMUG00000021933ELAVL49998.446Macaca_mulatta
ENSRNOG00000023601Elavl410099.481ENSMNEG00000035576ELAVL410099.481Macaca_nemestrina
ENSRNOG00000023601Elavl49999.211ENSMLEG00000028616ELAVL410099.211Mandrillus_leucophaeus
ENSRNOG00000023601Elavl49890.501ENSMAMG00000004000elavl49990.501Mastacembelus_armatus
ENSRNOG00000023601Elavl49890.551ENSMZEG00005010690elavl49290.551Maylandia_zebra
ENSRNOG00000023601Elavl49993.750ENSMGAG00000010928ELAVL49993.750Meleagris_gallopavo
ENSRNOG00000023601Elavl4100100.000ENSMAUG00000021566Elavl4100100.000Mesocricetus_auratus
ENSRNOG00000023601Elavl410099.740ENSMICG00000003286ELAVL410099.740Microcebus_murinus
ENSRNOG00000023601Elavl49999.474ENSMOCG00000010309Elavl4100100.000Microtus_ochrogaster
ENSRNOG00000023601Elavl49890.501ENSMMOG00000020264elavl49490.501Mola_mola
ENSRNOG00000023601Elavl49562.088ENSMODG00000003850-10062.088Monodelphis_domestica
ENSRNOG00000023601Elavl49392.027ENSMODG00000001300-10092.027Monodelphis_domestica
ENSRNOG00000023601Elavl49890.289ENSMALG00000016432elavl49690.237Monopterus_albus
ENSRNOG00000023601Elavl4100100.000MGP_CAROLIEiJ_G0026289Elavl4100100.000Mus_caroli
ENSRNOG00000023601Elavl4100100.000ENSMUSG00000028546Elavl4100100.000Mus_musculus
ENSRNOG00000023601Elavl4100100.000MGP_PahariEiJ_G0028622Elavl4100100.000Mus_pahari
ENSRNOG00000023601Elavl4100100.000MGP_SPRETEiJ_G0027258Elavl4100100.000Mus_spretus
ENSRNOG00000023601Elavl49999.474ENSMPUG00000007192ELAVL410099.474Mustela_putorius_furo
ENSRNOG00000023601Elavl49995.822ENSMLUG00000006226ELAVL410095.822Myotis_lucifugus
ENSRNOG00000023601Elavl49999.211ENSNGAG00000023123Elavl410099.469Nannospalax_galili
ENSRNOG00000023601Elavl49999.211ENSNLEG00000016303ELAVL410099.211Nomascus_leucogenys
ENSRNOG00000023601Elavl49896.552ENSMEUG00000007145ELAVL410096.552Notamacropus_eugenii
ENSRNOG00000023601Elavl4100100.000ENSOPRG00000015300ELAVL4100100.000Ochotona_princeps
ENSRNOG00000023601Elavl49999.474ENSODEG00000006770ELAVL4100100.000Octodon_degus
ENSRNOG00000023601Elavl49989.351ENSONIG00000002360elavl49989.351Oreochromis_niloticus
ENSRNOG00000023601Elavl48786.719ENSOANG00000007377ELAVL410086.719Ornithorhynchus_anatinus
ENSRNOG00000023601Elavl410094.545ENSOCUG00000016262ELAVL49594.545Oryctolagus_cuniculus
ENSRNOG00000023601Elavl49890.814ENSORLG00000028487elavl49389.870Oryzias_latipes
ENSRNOG00000023601Elavl49890.814ENSORLG00020014277elavl49290.814Oryzias_latipes_hni
ENSRNOG00000023601Elavl49890.814ENSORLG00015010143elavl49290.814Oryzias_latipes_hsok
ENSRNOG00000023601Elavl49890.289ENSOMEG00000009988elavl49389.583Oryzias_melastigma
ENSRNOG00000023601Elavl49995.300ENSOGAG00000016990ELAVL410095.300Otolemur_garnettii
ENSRNOG00000023601Elavl49999.478ENSOARG00000004264ELAVL410099.478Ovis_aries
ENSRNOG00000023601Elavl49998.446ENSPPAG00000042402ELAVL410099.732Pan_paniscus
ENSRNOG00000023601Elavl4100100.000ENSPPRG00000002764ELAVL4100100.000Panthera_pardus
ENSRNOG00000023601Elavl4100100.000ENSPTIG00000016727ELAVL4100100.000Panthera_tigris_altaica
ENSRNOG00000023601Elavl410099.740ENSPTRG00000000723ELAVL410099.740Pan_troglodytes
ENSRNOG00000023601Elavl410099.740ENSPANG00000017754ELAVL410099.740Papio_anubis
ENSRNOG00000023601Elavl49892.876ENSPKIG00000006999elavl49792.042Paramormyrops_kingsleyae
ENSRNOG00000023601Elavl410095.065ENSPSIG00000008545ELAVL410095.065Pelodiscus_sinensis
ENSRNOG00000023601Elavl49891.029ENSPMGG00000022175elavl49991.029Periophthalmus_magnuspinnatus
ENSRNOG00000023601Elavl49978.272ENSPEMG00000021058Elavl39978.892Peromyscus_maniculatus_bairdii
ENSRNOG00000023601Elavl48960.000ENSPCIG00000017116-9956.842Phascolarctos_cinereus
ENSRNOG00000023601Elavl49890.814ENSPFOG00000004811elavl410086.555Poecilia_formosa
ENSRNOG00000023601Elavl49890.765ENSPLAG00000008085elavl49990.765Poecilia_latipinna
ENSRNOG00000023601Elavl49890.814ENSPMEG00000015619elavl49090.814Poecilia_mexicana
ENSRNOG00000023601Elavl49890.814ENSPREG00000018937elavl49690.765Poecilia_reticulata
ENSRNOG00000023601Elavl410095.844ENSPPYG00000001367ELAVL410095.844Pongo_abelii
ENSRNOG00000023601Elavl4100100.000ENSPCAG00000008215ELAVL4100100.000Procavia_capensis
ENSRNOG00000023601Elavl49999.211ENSPCOG00000024957ELAVL410099.211Propithecus_coquereli
ENSRNOG00000023601Elavl410084.416ENSPVAG00000003632ELAVL410084.416Pteropus_vampyrus
ENSRNOG00000023601Elavl49990.052ENSPNYG00000021720elavl410090.052Pundamilia_nyererei
ENSRNOG00000023601Elavl49891.821ENSPNAG00000017169elavl49691.777Pygocentrus_nattereri
ENSRNOG00000023601Elavl49998.446ENSRBIG00000043810ELAVL49998.446Rhinopithecus_bieti
ENSRNOG00000023601Elavl49999.211ENSRROG00000044786ELAVL410099.211Rhinopithecus_roxellana
ENSRNOG00000023601Elavl49998.947ENSSBOG00000022965ELAVL410098.947Saimiri_boliviensis_boliviensis
ENSRNOG00000023601Elavl49362.011ENSSHAG00000001657-9462.011Sarcophilus_harrisii
ENSRNOG00000023601Elavl410093.766ENSSHAG00000013832-10094.474Sarcophilus_harrisii
ENSRNOG00000023601Elavl49892.084ENSSFOG00015015838elavl49692.042Scleropages_formosus
ENSRNOG00000023601Elavl49891.076ENSSMAG00000006881elavl49690.314Scophthalmus_maximus
ENSRNOG00000023601Elavl49890.501ENSSDUG00000000045elavl49289.817Seriola_dumerili
ENSRNOG00000023601Elavl49890.551ENSSLDG00000005260elavl49290.551Seriola_lalandi_dorsalis
ENSRNOG00000023601Elavl498100.000ENSSARG00000010733ELAVL4100100.000Sorex_araneus
ENSRNOG00000023601Elavl49794.906ENSSPUG00000011636ELAVL410094.906Sphenodon_punctatus
ENSRNOG00000023601Elavl49990.052ENSSPAG00000018867elavl49790.052Stegastes_partitus
ENSRNOG00000023601Elavl410096.364ENSSSCG00000037291ELAVL410096.364Sus_scrofa
ENSRNOG00000023601Elavl49895.225ENSTGUG00000008597ELAVL410095.225Taeniopygia_guttata
ENSRNOG00000023601Elavl49790.400ENSTRUG00000000523elavl49890.400Takifugu_rubripes
ENSRNOG00000023601Elavl49989.610ENSTNIG00000015485elavl410089.610Tetraodon_nigroviridis
ENSRNOG00000023601Elavl493100.000ENSTBEG00000011730ELAVL480100.000Tupaia_belangeri
ENSRNOG00000023601Elavl48598.374ENSTTRG00000012441ELAVL46798.374Tursiops_truncatus
ENSRNOG00000023601Elavl49896.296ENSUAMG00000013026ELAVL4100100.000Ursus_americanus
ENSRNOG00000023601Elavl498100.000ENSUMAG00000023149ELAVL4100100.000Ursus_maritimus
ENSRNOG00000023601Elavl4100100.000ENSVPAG00000011606ELAVL4100100.000Vicugna_pacos
ENSRNOG00000023601Elavl410096.364ENSVVUG00000006175ELAVL410096.364Vulpes_vulpes
ENSRNOG00000023601Elavl49888.206ENSXETG00000008680elavl410088.206Xenopus_tropicalis
ENSRNOG00000023601Elavl49890.814ENSXMAG00000025683elavl49690.765Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003729mRNA binding10436048.IDAFunction
GO:0003729mRNA binding-IEAFunction
GO:0003729mRNA binding-ISOFunction
GO:0003730mRNA 3'-UTR binding22736542.IDAFunction
GO:0005515protein binding21389246.23586486.IPIFunction
GO:0005634nucleus23545166.IDAComponent
GO:0005635nuclear envelope15389607.IDAComponent
GO:0005737cytoplasm16801526.IDAComponent
GO:0005829cytosol15519747.IDAComponent
GO:0005856cytoskeleton14745023.IDAComponent
GO:0007399nervous system development9729424.IEPProcess
GO:0007568aging23545166.IEPProcess
GO:0007612learning-IEAProcess
GO:0007612learning-ISOProcess
GO:0007626locomotory behavior-IEAProcess
GO:0007626locomotory behavior-ISOProcess
GO:0008306associative learning15519747.IEPProcess
GO:0016020membrane14745023.IDAComponent
GO:0017091AU-rich element binding-ISOFunction
GO:0017091AU-rich element binding-ISSFunction
GO:0030182neuron differentiation9514914.IMPProcess
GO:0030425dendrite14745023.IDAComponent
GO:0030426growth cone15389607.IDAComponent
GO:0031099regeneration12957493.IEPProcess
GO:0034976response to endoplasmic reticulum stress23711134.IEPProcess
GO:0042220response to cocaine19014379.IEPProcess
GO:0042788polysomal ribosome15519747.IDAComponent
GO:0043025neuronal cell body12859688.IDAComponent
GO:0043488regulation of mRNA stability22736542.IMPProcess
GO:0045182translation regulator activity25692578.EXPFunction
GO:0045182translation regulator activity25692578.IDAFunction
GO:0048813dendrite morphogenesis-IEAProcess
GO:0048813dendrite morphogenesis-ISOProcess
GO:0098978glutamatergic synapse25692578.EXPComponent
GO:0098978glutamatergic synapse25692578.IDAComponent
GO:0099547regulation of translation at synapse, modulating synaptic transmission25692578.EXPProcess
GO:0099547regulation of translation at synapse, modulating synaptic transmission25692578.IDAProcess
GO:1900006positive regulation of dendrite development22736542.IMPProcess
GO:1990090cellular response to nerve growth factor stimulus9514914.12859688.IEPProcess

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