EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000023805 (Gene tree)
Gene ID: -
Gene Symbol: AABR07042789.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 204 bases
Position: chr19:8943753-8943956
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071181	RNA_pol_N	PF01194.17	9.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000030597	AABR07042789.1-201	204	-	ENSRNOP00000071181	67 (aa)	-	A0A0G2JZT9

Gene Model

Click here to download ENSRNOG00000023805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000023805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSG00000177700	POLR2L	100	95.522	Homo_sapiens
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSAPOG00000011116	polr2l	100	94.030	Acanthochromis_polyacanthus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSACIG00000005514	polr2l	100	94.030	Amphilophus_citrinellus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSAOCG00000012342	polr2l	100	94.030	Amphiprion_ocellaris
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSAPEG00000015365	polr2l	100	94.030	Amphiprion_percula
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSATEG00000007953	polr2l	100	94.030	Anabas_testudineus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSACAG00000015509	POLR2L	100	95.522	Anolis_carolinensis
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSANAG00000022996	POLR2L	100	95.522	Aotus_nancymaae
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSACLG00000026685	polr2l	100	94.030	Astatotilapia_calliptera
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSAMXG00000037735	polr2l	100	94.030	Astyanax_mexicanus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSBTAG00000031061	POLR2L	100	95.522	Bos_taurus
ENSRNOG00000023805	AABR07042789.1	100	80.597	WBGene00021347	rpb-10	100	80.597	Caenorhabditis_elegans
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCJAG00000041101	POLR2L	100	95.522	Callithrix_jacchus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCAFG00020017621	POLR2L	100	95.522	Canis_lupus_dingo
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCHIG00000023006	POLR2L	100	95.522	Capra_hircus
ENSRNOG00000023805	AABR07042789.1	100	67.164	ENSTSYG00000027353	-	100	67.164	Carlito_syrichta
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCPOG00000033252	POLR2L	100	95.522	Cavia_porcellus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCCAG00000035630	POLR2L	100	95.522	Cebus_capucinus
ENSRNOG00000023805	AABR07042789.1	100	67.123	ENSCATG00000034571	-	100	67.123	Cercocebus_atys
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCATG00000041490	POLR2L	100	95.522	Cercocebus_atys
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCLAG00000002071	POLR2L	100	95.522	Chinchilla_lanigera
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCSAG00000010528	POLR2L	100	95.522	Chlorocebus_sabaeus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCPBG00000007106	POLR2L	100	95.522	Chrysemys_picta_bellii
ENSRNOG00000023805	AABR07042789.1	100	85.075	ENSCSAVG00000006078	-	100	85.075	Ciona_savignyi
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCANG00000043116	POLR2L	100	95.522	Colobus_angolensis_palliatus
ENSRNOG00000023805	AABR07042789.1	100	91.045	ENSCGRG00001003398	-	87	91.045	Cricetulus_griseus_chok1gshd
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCGRG00001023078	-	100	95.522	Cricetulus_griseus_chok1gshd
ENSRNOG00000023805	AABR07042789.1	100	91.045	ENSCGRG00000019284	-	87	91.045	Cricetulus_griseus_crigri
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSCGRG00000018042	-	100	95.522	Cricetulus_griseus_crigri
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSCSEG00000001959	polr2l	100	94.030	Cynoglossus_semilaevis
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSCVAG00000007386	polr2l	100	94.030	Cyprinodon_variegatus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSDARG00000058349	polr2l	100	94.030	Danio_rerio
ENSRNOG00000023805	AABR07042789.1	96	75.000	ENSDNOG00000049434	-	100	75.000	Dasypus_novemcinctus
ENSRNOG00000023805	AABR07042789.1	100	88.060	FBgn0039218	Rpb10	100	88.060	Drosophila_melanogaster
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSETEG00000012556	POLR2L	100	95.522	Echinops_telfairi
ENSRNOG00000023805	AABR07042789.1	100	91.045	ENSEBUG00000010353	-	100	91.045	Eptatretus_burgeri
ENSRNOG00000023805	AABR07042789.1	100	91.045	ENSEBUG00000000392	-	100	91.045	Eptatretus_burgeri
ENSRNOG00000023805	AABR07042789.1	100	70.149	ENSEASG00005017228	-	85	70.149	Equus_asinus_asinus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSEASG00005007478	POLR2L	100	95.522	Equus_asinus_asinus
ENSRNOG00000023805	AABR07042789.1	100	70.149	ENSECAG00000001180	POLR2L	85	70.149	Equus_caballus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSECAG00000031030	POLR2L	100	95.522	Equus_caballus
ENSRNOG00000023805	AABR07042789.1	100	73.134	ENSEEUG00000015795	-	100	73.134	Erinaceus_europaeus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSELUG00000009612	RPAB5	100	95.522	Esox_lucius
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSFCAG00000043112	POLR2L	100	95.522	Felis_catus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSFALG00000012058	POLR2L	100	95.522	Ficedula_albicollis
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSFDAG00000021533	POLR2L	100	95.522	Fukomys_damarensis
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSFHEG00000019804	polr2l	100	94.030	Fundulus_heteroclitus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSGMOG00000001279	polr2l	100	95.522	Gadus_morhua
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSGALG00000006841	POLR2L	100	95.522	Gallus_gallus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSGAFG00000013789	polr2l	100	94.030	Gambusia_affinis
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSGAGG00000006577	POLR2L	100	92.537	Gopherus_agassizii
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSGAGG00000017751	-	51	95.522	Gopherus_agassizii
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSGGOG00000010821	POLR2L	100	95.522	Gorilla_gorilla
ENSRNOG00000023805	AABR07042789.1	99	68.182	ENSGGOG00000040273	-	100	68.182	Gorilla_gorilla
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSHBUG00000013767	polr2l	100	94.030	Haplochromis_burtoni
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSHGLG00000007095	POLR2L	100	95.522	Heterocephalus_glaber_female
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSHGLG00100010399	POLR2L	100	95.522	Heterocephalus_glaber_male
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSHCOG00000008730	polr2l	100	92.537	Hippocampus_comes
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSIPUG00000017431	polr2l	100	92.537	Ictalurus_punctatus
ENSRNOG00000023805	AABR07042789.1	99	68.657	ENSSTOG00000022797	-	81	68.657	Ictidomys_tridecemlineatus
ENSRNOG00000023805	AABR07042789.1	100	82.090	ENSJJAG00000011334	-	100	82.090	Jaculus_jaculus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSJJAG00000011194	-	100	95.522	Jaculus_jaculus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSKMAG00000003267	polr2l	100	94.030	Kryptolebias_marmoratus
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSLBEG00000000928	polr2l	100	92.537	Labrus_bergylta
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSLACG00000017570	POLR2L	100	92.537	Latimeria_chalumnae
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMFAG00000001554	POLR2L	100	95.522	Macaca_fascicularis
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMNEG00000026729	POLR2L	100	95.522	Macaca_nemestrina
ENSRNOG00000023805	AABR07042789.1	100	68.493	ENSMLEG00000042017	-	100	68.493	Mandrillus_leucophaeus
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSMAMG00000021937	polr2l	100	92.537	Mastacembelus_armatus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSMZEG00005000960	polr2l	100	94.030	Maylandia_zebra
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMGAG00000011610	POLR2L	100	95.522	Meleagris_gallopavo
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMAUG00000019023	Polr2l	100	95.522	Mesocricetus_auratus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMICG00000047069	POLR2L	100	95.522	Microcebus_murinus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMOCG00000021062	Polr2l	100	95.522	Microtus_ochrogaster
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSMMOG00000017276	polr2l	100	94.030	Mola_mola
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSMALG00000018890	polr2l	100	92.537	Monopterus_albus
ENSRNOG00000023805	AABR07042789.1	100	95.522	MGP_CAROLIEiJ_G0030702	Polr2l	100	95.522	Mus_caroli
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMUSG00000038489	Polr2l	100	95.522	Mus_musculus
ENSRNOG00000023805	AABR07042789.1	100	95.522	MGP_PahariEiJ_G0013901	Polr2l	100	95.522	Mus_pahari
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSMLUG00000005362	POLR2L	100	94.030	Myotis_lucifugus
ENSRNOG00000023805	AABR07042789.1	100	82.090	ENSNGAG00000014203	-	100	82.090	Nannospalax_galili
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSNGAG00000015204	-	100	95.522	Nannospalax_galili
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSNBRG00000013837	polr2l	100	94.030	Neolamprologus_brichardi
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSNLEG00000008683	POLR2L	100	95.522	Nomascus_leucogenys
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSMEUG00000003938	POLR2L	100	95.522	Notamacropus_eugenii
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSOPRG00000009675	-	100	94.030	Ochotona_princeps
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSOPRG00000001702	-	100	92.537	Ochotona_princeps
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSODEG00000016905	-	100	95.522	Octodon_degus
ENSRNOG00000023805	AABR07042789.1	100	85.075	ENSODEG00000014372	-	100	85.075	Octodon_degus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSORLG00000027182	polr2l	99	94.030	Oryzias_latipes
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSORLG00020012637	polr2l	99	94.030	Oryzias_latipes_hni
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSORLG00015011064	polr2l	99	94.030	Oryzias_latipes_hsok
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSOMEG00000020485	polr2l	99	94.030	Oryzias_melastigma
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSOGAG00000024166	POLR2L	100	95.522	Otolemur_garnettii
ENSRNOG00000023805	AABR07042789.1	51	94.118	ENSPTIG00000012764	POLR2L	51	94.118	Panthera_tigris_altaica
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSPTRG00000052712	POLR2L	100	95.522	Pan_troglodytes
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSPANG00000032375	POLR2L	100	95.522	Papio_anubis
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPKIG00000017973	polr2l	84	94.030	Paramormyrops_kingsleyae
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSPSIG00000013867	POLR2L	100	95.522	Pelodiscus_sinensis
ENSRNOG00000023805	AABR07042789.1	100	89.552	ENSPMGG00000004854	polr2l	100	89.552	Periophthalmus_magnuspinnatus
ENSRNOG00000023805	AABR07042789.1	100	86.567	ENSPEMG00000014839	-	100	86.567	Peromyscus_maniculatus_bairdii
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSPCIG00000008250	-	100	95.522	Phascolarctos_cinereus
ENSRNOG00000023805	AABR07042789.1	100	70.149	ENSPCIG00000011752	-	100	70.149	Phascolarctos_cinereus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPFOG00000004650	polr2l	100	94.030	Poecilia_formosa
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPLAG00000010698	polr2l	100	94.030	Poecilia_latipinna
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPMEG00000015438	polr2l	100	94.030	Poecilia_mexicana
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPREG00000022948	polr2l	100	94.030	Poecilia_reticulata
ENSRNOG00000023805	AABR07042789.1	100	89.552	ENSPPYG00000029850	POLR2L	100	89.552	Pongo_abelii
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSPCAG00000011644	POLR2L	100	95.522	Procavia_capensis
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSPVAG00000014859	POLR2L	100	95.522	Pteropus_vampyrus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPNYG00000007348	polr2l	100	94.030	Pundamilia_nyererei
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSPNAG00000015066	polr2l	100	94.030	Pygocentrus_nattereri
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSRBIG00000033751	POLR2L	100	95.522	Rhinopithecus_bieti
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSRROG00000045437	-	100	95.522	Rhinopithecus_roxellana
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSRROG00000001154	-	100	95.522	Rhinopithecus_roxellana
ENSRNOG00000023805	AABR07042789.1	100	70.588	YOR210W	RPB10	97	70.588	Saccharomyces_cerevisiae
ENSRNOG00000023805	AABR07042789.1	100	64.179	ENSSBOG00000026975	-	100	64.179	Saimiri_boliviensis_boliviensis
ENSRNOG00000023805	AABR07042789.1	100	91.045	ENSSFOG00015010252	polr2l	100	91.045	Scleropages_formosus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSSMAG00000021392	polr2l	100	94.030	Scophthalmus_maximus
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSSDUG00000008725	polr2l	100	92.537	Seriola_dumerili
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSSLDG00000024029	polr2l	100	92.537	Seriola_lalandi_dorsalis
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSSARG00000007627	POLR2L	100	95.522	Sorex_araneus
ENSRNOG00000023805	AABR07042789.1	100	86.567	ENSSPUG00000005252	POLR2L	69	86.567	Sphenodon_punctatus
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSSPAG00000019322	polr2l	100	94.030	Stegastes_partitus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSSSCG00000033068	-	100	95.522	Sus_scrofa
ENSRNOG00000023805	AABR07042789.1	100	80.597	ENSSSCG00000000461	-	100	80.597	Sus_scrofa
ENSRNOG00000023805	AABR07042789.1	100	73.134	ENSSSCG00000012839	-	100	73.134	Sus_scrofa
ENSRNOG00000023805	AABR07042789.1	100	82.090	ENSTGUG00000009757	POLR2L	100	82.090	Taeniopygia_guttata
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSTRUG00000017292	polr2l	100	92.537	Takifugu_rubripes
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSTTRG00000012496	POLR2L	100	92.537	Tursiops_truncatus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSUAMG00000024755	-	100	95.522	Ursus_americanus
ENSRNOG00000023805	AABR07042789.1	100	64.179	ENSUAMG00000016335	-	63	64.179	Ursus_americanus
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSVVUG00000000205	POLR2L	100	95.522	Vulpes_vulpes
ENSRNOG00000023805	AABR07042789.1	100	92.537	ENSXETG00000002878	polr2l.2	100	92.537	Xenopus_tropicalis
ENSRNOG00000023805	AABR07042789.1	100	95.522	ENSXETG00000025768	polr2l.1	100	95.522	Xenopus_tropicalis
ENSRNOG00000023805	AABR07042789.1	100	94.030	ENSXMAG00000007260	polr2l	100	94.030	Xiphophorus_maculatus