EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024190 (Gene tree)
Gene ID: 298138
Gene Symbol: Rasef
Alias: LOC298137|LOC298138
Full Name: RAS and EF hand domain containing
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 69877 bases
Position: chr5:90419020-90488896
Accession: 1306418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000055680	MMR_HSR1	PF01926.23	1.5e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000058893	-	2443	-	ENSRNOP00000055680	709 (aa)	-	F1LVA5

Gene Model

Click here to download ENSRNOG00000024190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024190	Rasef	100	75.541	ENSG00000165105	RASEF	100	75.811	Homo_sapiens
ENSRNOG00000024190	Rasef	94	51.669	ENSAPOG00000024369	rasef	98	53.208	Acanthochromis_polyacanthus
ENSRNOG00000024190	Rasef	98	77.361	ENSAMEG00000009467	RASEF	98	77.361	Ailuropoda_melanoleuca
ENSRNOG00000024190	Rasef	94	51.694	ENSACIG00000005549	rasef	98	51.694	Amphilophus_citrinellus
ENSRNOG00000024190	Rasef	93	51.760	ENSAOCG00000011464	rasef	95	49.190	Amphiprion_ocellaris
ENSRNOG00000024190	Rasef	99	50.820	ENSAPEG00000003461	rasef	99	51.093	Amphiprion_percula
ENSRNOG00000024190	Rasef	94	52.746	ENSATEG00000015032	rasef	99	52.814	Anabas_testudineus
ENSRNOG00000024190	Rasef	84	71.500	ENSAPLG00000013969	RASEF	95	71.500	Anas_platyrhynchos
ENSRNOG00000024190	Rasef	99	67.697	ENSACAG00000002155	RASEF	99	67.697	Anolis_carolinensis
ENSRNOG00000024190	Rasef	100	76.757	ENSANAG00000035226	RASEF	100	76.892	Aotus_nancymaae
ENSRNOG00000024190	Rasef	99	52.348	ENSACLG00000017818	rasef	99	52.348	Astatotilapia_calliptera
ENSRNOG00000024190	Rasef	98	53.296	ENSAMXG00000011411	rasef	97	53.576	Astyanax_mexicanus
ENSRNOG00000024190	Rasef	100	76.216	ENSBTAG00000021751	RASEF	100	76.622	Bos_taurus
ENSRNOG00000024190	Rasef	100	76.622	ENSCJAG00000003547	RASEF	100	76.892	Callithrix_jacchus
ENSRNOG00000024190	Rasef	96	82.010	ENSCAFG00000001453	RASEF	92	75.467	Canis_familiaris
ENSRNOG00000024190	Rasef	96	82.172	ENSCAFG00020023859	RASEF	99	76.486	Canis_lupus_dingo
ENSRNOG00000024190	Rasef	100	76.351	ENSCHIG00000020336	RASEF	96	82.471	Capra_hircus
ENSRNOG00000024190	Rasef	73	80.577	ENSTSYG00000006987	RASEF	99	80.577	Carlito_syrichta
ENSRNOG00000024190	Rasef	70	62.424	ENSCAPG00000010585	-	100	62.424	Cavia_aperea
ENSRNOG00000024190	Rasef	84	75.462	ENSCPOG00000005004	RASEF	100	75.462	Cavia_porcellus
ENSRNOG00000024190	Rasef	100	76.178	ENSCCAG00000031624	RASEF	100	76.622	Cebus_capucinus
ENSRNOG00000024190	Rasef	77	45.730	ENSCLAG00000004622	-	99	45.730	Chinchilla_lanigera
ENSRNOG00000024190	Rasef	100	75.577	ENSCSAG00000007663	RASEF	100	75.577	Chlorocebus_sabaeus
ENSRNOG00000024190	Rasef	82	76.672	ENSCHOG00000001831	RASEF	97	76.672	Choloepus_hoffmanni
ENSRNOG00000024190	Rasef	99	68.724	ENSCPBG00000019037	RASEF	99	68.724	Chrysemys_picta_bellii
ENSRNOG00000024190	Rasef	100	75.270	ENSCANG00000034081	RASEF	100	75.541	Colobus_angolensis_palliatus
ENSRNOG00000024190	Rasef	83	88.663	ENSCGRG00001001324	Rasef	100	88.663	Cricetulus_griseus_chok1gshd
ENSRNOG00000024190	Rasef	78	88.129	ENSCGRG00000006455	Rasef	100	88.129	Cricetulus_griseus_crigri
ENSRNOG00000024190	Rasef	91	49.245	ENSCSEG00000017898	rasef	92	48.946	Cynoglossus_semilaevis
ENSRNOG00000024190	Rasef	99	53.389	ENSCVAG00000006168	rasef	94	53.389	Cyprinodon_variegatus
ENSRNOG00000024190	Rasef	99	52.066	ENSDARG00000076250	rasef	99	52.066	Danio_rerio
ENSRNOG00000024190	Rasef	100	75.370	ENSDNOG00000006002	RASEF	91	75.370	Dasypus_novemcinctus
ENSRNOG00000024190	Rasef	77	81.022	ENSDORG00000015570	Rasef	100	80.987	Dipodomys_ordii
ENSRNOG00000024190	Rasef	82	38.042	ENSEBUG00000012179	rasef	99	38.042	Eptatretus_burgeri
ENSRNOG00000024190	Rasef	98	46.547	ENSEBUG00000012629	rasef	99	46.547	Eptatretus_burgeri
ENSRNOG00000024190	Rasef	99	78.592	ENSEASG00005015967	RASEF	98	81.072	Equus_asinus_asinus
ENSRNOG00000024190	Rasef	99	77.966	ENSECAG00000000324	RASEF	98	81.208	Equus_caballus
ENSRNOG00000024190	Rasef	79	68.806	ENSEEUG00000008455	RASEF	100	68.806	Erinaceus_europaeus
ENSRNOG00000024190	Rasef	99	76.184	ENSFCAG00000002416	RASEF	99	76.184	Felis_catus
ENSRNOG00000024190	Rasef	84	71.381	ENSFALG00000003611	RASEF	99	71.381	Ficedula_albicollis
ENSRNOG00000024190	Rasef	84	78.523	ENSFDAG00000013428	RASEF	100	78.523	Fukomys_damarensis
ENSRNOG00000024190	Rasef	94	53.097	ENSFHEG00000022470	rasef	91	53.097	Fundulus_heteroclitus
ENSRNOG00000024190	Rasef	94	51.940	ENSGMOG00000010090	rasef	99	49.630	Gadus_morhua
ENSRNOG00000024190	Rasef	99	67.586	ENSGALG00000012576	RASEF	99	67.989	Gallus_gallus
ENSRNOG00000024190	Rasef	99	52.156	ENSGAFG00000013735	rasef	97	52.156	Gambusia_affinis
ENSRNOG00000024190	Rasef	99	53.652	ENSGACG00000007528	rasef	99	53.652	Gasterosteus_aculeatus
ENSRNOG00000024190	Rasef	99	69.024	ENSGAGG00000007338	RASEF	99	69.024	Gopherus_agassizii
ENSRNOG00000024190	Rasef	100	75.270	ENSGGOG00000006651	RASEF	100	75.811	Gorilla_gorilla
ENSRNOG00000024190	Rasef	99	52.308	ENSHBUG00000010345	rasef	98	52.210	Haplochromis_burtoni
ENSRNOG00000024190	Rasef	100	75.137	ENSHGLG00000000399	RASEF	100	75.137	Heterocephalus_glaber_female
ENSRNOG00000024190	Rasef	84	79.027	ENSHGLG00100008043	RASEF	100	79.027	Heterocephalus_glaber_male
ENSRNOG00000024190	Rasef	99	47.199	ENSHCOG00000010976	rasef	98	48.232	Hippocampus_comes
ENSRNOG00000024190	Rasef	98	51.264	ENSIPUG00000008768	rasef	97	51.264	Ictalurus_punctatus
ENSRNOG00000024190	Rasef	100	74.189	ENSSTOG00000004311	RASEF	100	75.000	Ictidomys_tridecemlineatus
ENSRNOG00000024190	Rasef	84	80.100	ENSJJAG00000023215	Rasef	100	80.100	Jaculus_jaculus
ENSRNOG00000024190	Rasef	99	52.081	ENSKMAG00000021106	rasef	88	52.081	Kryptolebias_marmoratus
ENSRNOG00000024190	Rasef	99	48.954	ENSLBEG00000021098	-	100	49.372	Labrus_bergylta
ENSRNOG00000024190	Rasef	99	63.357	ENSLACG00000010849	RASEF	99	63.357	Latimeria_chalumnae
ENSRNOG00000024190	Rasef	99	60.734	ENSLOCG00000002094	rasef	99	60.734	Lepisosteus_oculatus
ENSRNOG00000024190	Rasef	84	80.705	ENSLAFG00000010552	RASEF	100	80.705	Loxodonta_africana
ENSRNOG00000024190	Rasef	100	75.541	ENSMFAG00000046414	RASEF	100	75.811	Macaca_fascicularis
ENSRNOG00000024190	Rasef	100	75.236	ENSMNEG00000044341	RASEF	100	75.370	Macaca_nemestrina
ENSRNOG00000024190	Rasef	100	75.270	ENSMLEG00000034579	RASEF	100	75.811	Mandrillus_leucophaeus
ENSRNOG00000024190	Rasef	86	51.577	ENSMAMG00000001536	rasef	97	51.567	Mastacembelus_armatus
ENSRNOG00000024190	Rasef	94	50.517	ENSMZEG00005004819	rasef	99	50.517	Maylandia_zebra
ENSRNOG00000024190	Rasef	84	89.244	ENSMAUG00000010820	Rasef	100	89.244	Mesocricetus_auratus
ENSRNOG00000024190	Rasef	100	75.778	ENSMICG00000011836	RASEF	100	75.913	Microcebus_murinus
ENSRNOG00000024190	Rasef	84	89.748	ENSMOCG00000000943	Rasef	100	89.209	Microtus_ochrogaster
ENSRNOG00000024190	Rasef	97	50.635	ENSMMOG00000000102	rasef	99	50.635	Mola_mola
ENSRNOG00000024190	Rasef	100	70.421	ENSMODG00000009037	RASEF	100	70.692	Monodelphis_domestica
ENSRNOG00000024190	Rasef	99	50.624	ENSMALG00000009830	rasef	99	50.624	Monopterus_albus
ENSRNOG00000024190	Rasef	86	88.177	MGP_CAROLIEiJ_G0026109	Rasef	100	89.748	Mus_caroli
ENSRNOG00000024190	Rasef	100	89.422	ENSMUSG00000043003	Rasef	100	89.928	Mus_musculus
ENSRNOG00000024190	Rasef	84	90.084	MGP_PahariEiJ_G0028447	Rasef	100	89.928	Mus_pahari
ENSRNOG00000024190	Rasef	85	88.099	MGP_SPRETEiJ_G0027075	Rasef	100	89.209	Mus_spretus
ENSRNOG00000024190	Rasef	78	79.964	ENSMPUG00000013070	RASEF	99	79.964	Mustela_putorius_furo
ENSRNOG00000024190	Rasef	100	74.089	ENSMLUG00000013108	RASEF	100	74.089	Myotis_lucifugus
ENSRNOG00000024190	Rasef	78	82.226	ENSNGAG00000014878	Rasef	100	82.226	Nannospalax_galili
ENSRNOG00000024190	Rasef	94	49.707	ENSNBRG00000012335	rasef	99	49.707	Neolamprologus_brichardi
ENSRNOG00000024190	Rasef	100	75.101	ENSNLEG00000003245	RASEF	100	75.946	Nomascus_leucogenys
ENSRNOG00000024190	Rasef	100	67.388	ENSMEUG00000016412	RASEF	100	67.659	Notamacropus_eugenii
ENSRNOG00000024190	Rasef	93	75.000	ENSOPRG00000002742	-	89	75.000	Ochotona_princeps
ENSRNOG00000024190	Rasef	99	52.308	ENSONIG00000015021	rasef	99	52.273	Oreochromis_niloticus
ENSRNOG00000024190	Rasef	100	65.821	ENSOANG00000010379	RASEF	100	66.088	Ornithorhynchus_anatinus
ENSRNOG00000024190	Rasef	100	73.890	ENSOCUG00000001548	RASEF	100	74.459	Oryctolagus_cuniculus
ENSRNOG00000024190	Rasef	99	52.282	ENSORLG00000005076	rasef	93	52.420	Oryzias_latipes
ENSRNOG00000024190	Rasef	99	52.144	ENSORLG00020020049	rasef	93	52.282	Oryzias_latipes_hni
ENSRNOG00000024190	Rasef	99	51.867	ENSORLG00015008479	rasef	93	52.006	Oryzias_latipes_hsok
ENSRNOG00000024190	Rasef	99	51.872	ENSOMEG00000023457	rasef	98	53.411	Oryzias_melastigma
ENSRNOG00000024190	Rasef	84	81.544	ENSOGAG00000012724	RASEF	99	81.544	Otolemur_garnettii
ENSRNOG00000024190	Rasef	100	76.081	ENSOARG00000009073	RASEF	94	76.757	Ovis_aries
ENSRNOG00000024190	Rasef	100	78.073	ENSPPAG00000042152	RASEF	100	78.212	Pan_paniscus
ENSRNOG00000024190	Rasef	99	76.184	ENSPPRG00000008487	RASEF	99	76.725	Panthera_pardus
ENSRNOG00000024190	Rasef	87	81.361	ENSPTIG00000006676	RASEF	96	79.651	Panthera_tigris_altaica
ENSRNOG00000024190	Rasef	100	78.073	ENSPTRG00000021052	RASEF	100	78.212	Pan_troglodytes
ENSRNOG00000024190	Rasef	100	75.135	ENSPANG00000024899	RASEF	100	75.541	Papio_anubis
ENSRNOG00000024190	Rasef	85	67.657	ENSPSIG00000017699	RASEF	96	68.534	Pelodiscus_sinensis
ENSRNOG00000024190	Rasef	99	43.460	ENSPMGG00000015499	rasef	91	81.308	Periophthalmus_magnuspinnatus
ENSRNOG00000024190	Rasef	84	88.908	ENSPEMG00000002797	Rasef	100	88.309	Peromyscus_maniculatus_bairdii
ENSRNOG00000024190	Rasef	94	42.779	ENSPMAG00000001634	rasef	98	42.916	Petromyzon_marinus
ENSRNOG00000024190	Rasef	100	70.270	ENSPCIG00000027655	RASEF	100	70.270	Phascolarctos_cinereus
ENSRNOG00000024190	Rasef	99	50.134	ENSPFOG00000018924	rasef	99	50.134	Poecilia_formosa
ENSRNOG00000024190	Rasef	83	51.252	ENSPLAG00000022907	RASEF	97	51.252	Poecilia_latipinna
ENSRNOG00000024190	Rasef	99	52.566	ENSPMEG00000006546	rasef	99	52.566	Poecilia_mexicana
ENSRNOG00000024190	Rasef	99	52.239	ENSPREG00000018728	rasef	93	52.239	Poecilia_reticulata
ENSRNOG00000024190	Rasef	100	74.832	ENSPPYG00000019320	RASEF	100	75.541	Pongo_abelii
ENSRNOG00000024190	Rasef	100	75.034	ENSPCOG00000022979	RASEF	100	75.843	Propithecus_coquereli
ENSRNOG00000024190	Rasef	100	74.293	ENSPVAG00000003682	RASEF	100	74.865	Pteropus_vampyrus
ENSRNOG00000024190	Rasef	94	51.153	ENSPNYG00000010579	rasef	94	51.153	Pundamilia_nyererei
ENSRNOG00000024190	Rasef	99	52.747	ENSPNAG00000016447	rasef	99	52.747	Pygocentrus_nattereri
ENSRNOG00000024190	Rasef	100	75.541	ENSRBIG00000039516	RASEF	100	75.676	Rhinopithecus_bieti
ENSRNOG00000024190	Rasef	95	75.779	ENSRROG00000044397	RASEF	100	75.921	Rhinopithecus_roxellana
ENSRNOG00000024190	Rasef	100	74.459	ENSSBOG00000029298	RASEF	100	74.459	Saimiri_boliviensis_boliviensis
ENSRNOG00000024190	Rasef	100	60.530	ENSSFOG00015009014	rasef	100	60.530	Scleropages_formosus
ENSRNOG00000024190	Rasef	99	49.123	ENSSMAG00000000942	rasef	99	49.393	Scophthalmus_maximus
ENSRNOG00000024190	Rasef	94	44.183	ENSSDUG00000022228	rasef	92	45.199	Seriola_dumerili
ENSRNOG00000024190	Rasef	99	52.113	ENSSLDG00000001784	rasef	92	52.113	Seriola_lalandi_dorsalis
ENSRNOG00000024190	Rasef	99	63.904	ENSSPUG00000002899	RASEF	99	64.888	Sphenodon_punctatus
ENSRNOG00000024190	Rasef	99	50.880	ENSSPAG00000002442	rasef	95	51.150	Stegastes_partitus
ENSRNOG00000024190	Rasef	88	80.960	ENSSSCG00000040707	-	94	80.960	Sus_scrofa
ENSRNOG00000024190	Rasef	99	67.773	ENSTGUG00000003216	RASEF	99	67.773	Taeniopygia_guttata
ENSRNOG00000024190	Rasef	99	50.275	ENSTRUG00000011541	rasef	99	50.275	Takifugu_rubripes
ENSRNOG00000024190	Rasef	99	49.530	ENSTNIG00000006010	rasef	99	49.530	Tetraodon_nigroviridis
ENSRNOG00000024190	Rasef	100	69.086	ENSTTRG00000002061	RASEF	100	69.355	Tursiops_truncatus
ENSRNOG00000024190	Rasef	99	78.691	ENSUAMG00000021591	RASEF	97	82.718	Ursus_americanus
ENSRNOG00000024190	Rasef	84	82.886	ENSUMAG00000004670	RASEF	94	82.886	Ursus_maritimus
ENSRNOG00000024190	Rasef	88	79.100	ENSVVUG00000029736	RASEF	97	81.773	Vulpes_vulpes
ENSRNOG00000024190	Rasef	99	64.543	ENSXETG00000016758	mgc147600	99	64.730	Xenopus_tropicalis
ENSRNOG00000024190	Rasef	83	46.281	ENSXCOG00000005178	rasef	87	46.281	Xiphophorus_couchianus
ENSRNOG00000024190	Rasef	99	51.939	ENSXMAG00000015129	rasef	99	51.939	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	-	IEA	Function
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0019003	GDP binding	-	IEA	Function
GO:0019003	GDP binding	-	ISO	Function
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0051260	protein homooligomerization	-	IEA	Process
GO:0051260	protein homooligomerization	-	ISO	Process